RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 ALDH6A1Q02252 535 aaKnown RBP13.34□□□□□ -0.27
CD48-203ENST00000613788 SLC25A53Q5H9E4 307 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 ULK3Q6PHR2 472 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 FAM180AQ6UWF9 173 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 GRINAQ7Z429 371 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 Q8NA96 180 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 FAM83FQ8NEG4 500 aaPredicted RBP13.34□□□□□ -0.27
CD48-203ENST00000613788 ADAMTS16Q8TE57 1224 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 PHF10Q8WUB8 498 aaKnown RBP13.34□□□□□ -0.27
CD48-203ENST00000613788 STMN2Q93045 179 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 PRRC1Q96M27 445 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 TAAR6Q96RI8 345 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 KLHDC3Q9BQ90 382 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 PIGQQ9BRB3 760 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 OR2B2Q9GZK3 357 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 ADAM19Q9H013 955 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 ACKR4Q9NPB9 350 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 ARMC1Q9NVT9 282 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 LUZP4Q9P127 313 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 AP4S1Q9Y587 144 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 PKD1L2Q7Z442 2459 aa13.33□□□□□ -0.27
CD48-203ENST00000613788 A0A1B0GWA3 101 aa13.33□□□□□ -0.28
CD48-203ENST00000613788 LINC01387J3KSC0 135 aa13.33□□□□□ -0.28
CD48-203ENST00000613788 FKBP6O75344 327 aa13.33□□□□□ -0.28
CD48-203ENST00000613788 ENTPD5O75356 428 aa13.33□□□□□ -0.28
CD48-203ENST00000613788 OR5F1O95221 314 aa13.33□□□□□ -0.28
CD48-203ENST00000613788 THRBP10828 461 aa13.33□□□□□ -0.28
CD48-203ENST00000613788 GCKP35557 465 aa13.33□□□□□ -0.28
CD48-203ENST00000613788 APOBEC1P41238 236 aaKnown RBP13.33□□□□□ -0.28
CD48-203ENST00000613788 YAP1P46937 504 aaKnown RBP13.33□□□□□ -0.28
CD48-203ENST00000613788 DLX5P56178 289 aa13.33□□□□□ -0.28
CD48-203ENST00000613788 ST3GAL3Q11203 375 aa13.33□□□□□ -0.28
CD48-203ENST00000613788 PIN1Q13526 163 aaPredicted RBP13.33□□□□□ -0.28
CD48-203ENST00000613788 RNFT1Q5M7Z0 435 aa13.33□□□□□ -0.28
CD48-203ENST00000613788 TSEN54Q7Z6J9 526 aaKnown RBP13.33□□□□□ -0.28
CD48-203ENST00000613788 YRDCQ86U90 279 aaKnown RBP13.33□□□□□ -0.28
CD48-203ENST00000613788 GTPBP8Q8N3Z3 284 aaPredicted RBP13.33□□□□□ -0.28
CD48-203ENST00000613788 SLCO4A1Q96BD0 722 aa13.33□□□□□ -0.28
CD48-203ENST00000613788 FNDC11Q9BVV2 318 aa13.33□□□□□ -0.28
CD48-203ENST00000613788 ZDHHC11Q9H8X9 412 aa13.33□□□□□ -0.28
CD48-203ENST00000613788 C12orf10Q9HB07 376 aa13.33□□□□□ -0.28
CD48-203ENST00000613788 CTPS2Q9NRF8 586 aa13.33□□□□□ -0.28
CD48-203ENST00000613788 RIMS3Q9UJD0 308 aa13.33□□□□□ -0.28
CD48-203ENST00000613788 NTNG1Q9Y2I2 539 aa13.33□□□□□ -0.28
CD48-203ENST00000613788 RPH3AQ9Y2J0 694 aaPredicted RBP13.33□□□□□ -0.28
CD48-203ENST00000613788 A0A0B4J2E0 115 aa13.32□□□□□ -0.28
CD48-203ENST00000613788 A0A1B0GX12 115 aa13.32□□□□□ -0.28
CD48-203ENST00000613788 H0YHG0 523 aa13.32□□□□□ -0.28
CD48-203ENST00000613788 HNRNPRO43390 633 aaKnown RBP13.32□□□□□ -0.28
CD48-203ENST00000613788 PNMTP11086 282 aa13.32□□□□□ -0.28
CD48-203ENST00000613788 ZNF17P17021 662 aa13.32□□□□□ -0.28
CD48-203ENST00000613788 TACR3P29371 465 aa13.32□□□□□ -0.28
CD48-203ENST00000613788 POLR2HP52434 150 aaKnown RBP13.32□□□□□ -0.28
CD48-203ENST00000613788 MAP2K6P52564 334 aa13.32□□□□□ -0.28
CD48-203ENST00000613788 SMIM11AP58511 58 aa13.32□□□□□ -0.28
CD48-203ENST00000613788 MERTKQ12866 999 aa13.32□□□□□ -0.28
CD48-203ENST00000613788 IQCCQ4KMZ1 466 aa13.32□□□□□ -0.28
CD48-203ENST00000613788 ALG10BQ5I7T1 473 aa13.32□□□□□ -0.28
CD48-203ENST00000613788 SWT1Q5T5J6 900 aaKnown RBP13.32□□□□□ -0.28
CD48-203ENST00000613788 RAET1LQ5VY80 246 aa13.32□□□□□ -0.28
CD48-203ENST00000613788 RNF217Q8TC41 542 aa13.32□□□□□ -0.28
CD48-203ENST00000613788 C3orf49Q96BT1 292 aa13.32□□□□□ -0.28
CD48-203ENST00000613788 ZNF524Q96C55 264 aa13.32□□□□□ -0.28
CD48-203ENST00000613788 SLC41A3Q96GZ6 507 aa13.32□□□□□ -0.28
CD48-203ENST00000613788 PIP5K1AQ99755 562 aa13.32□□□□□ -0.28
CD48-203ENST00000613788 DEFB127Q9H1M4 99 aa13.32□□□□□ -0.28
CD48-203ENST00000613788 LDAHQ9H6V9 325 aa13.32□□□□□ -0.28
CD48-203ENST00000613788 SERINC1Q9NRX5 453 aa13.32□□□□□ -0.28
CD48-203ENST00000613788 STOML1Q9UBI4 398 aa13.32□□□□□ -0.28
CD48-203ENST00000613788 ACAD8Q9UKU7 415 aa13.32□□□□□ -0.28
CD48-203ENST00000613788 A4GNTQ9UNA3 340 aa13.32□□□□□ -0.28
CD48-203ENST00000613788 J3KTA2 159 aa13.31□□□□□ -0.28
CD48-203ENST00000613788 ATXN7O15265 892 aaPredicted RBP13.31□□□□□ -0.28
CD48-203ENST00000613788 SEMA7AO75326 666 aa13.31□□□□□ -0.28
CD48-203ENST00000613788 DIRAS1O95057 198 aa13.31□□□□□ -0.28
CD48-203ENST00000613788 NTN1O95631 604 aa13.31□□□□□ -0.28
CD48-203ENST00000613788 CST1P01037 141 aa13.31□□□□□ -0.28
CD48-203ENST00000613788 MT-ND1P03886 318 aa13.31□□□□□ -0.28
CD48-203ENST00000613788 FCGR1AP12314 374 aa13.31□□□□□ -0.28
CD48-203ENST00000613788 TCEA1P23193 301 aaKnown RBP13.31□□□□□ -0.28
CD48-203ENST00000613788 CXCR1P25024 350 aa13.31□□□□□ -0.28
CD48-203ENST00000613788 FKBP2P26885 142 aaKnown RBP13.31□□□□□ -0.28
CD48-203ENST00000613788 MST1P26927 711 aa13.31□□□□□ -0.28
CD48-203ENST00000613788 CDH12P55289 794 aa13.31□□□□□ -0.28
CD48-203ENST00000613788 ELF3P78545 371 aaPredicted RBP13.31□□□□□ -0.28
CD48-203ENST00000613788 FOXF1Q12946 379 aa13.31□□□□□ -0.28
CD48-203ENST00000613788 TMEM44Q2T9K0 475 aa13.31□□□□□ -0.28
CD48-203ENST00000613788 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.31□□□□□ -0.28
CD48-203ENST00000613788 WIPI1Q5MNZ9 446 aaPredicted RBP13.31□□□□□ -0.28
CD48-203ENST00000613788 AAGABQ6PD74 315 aa13.31□□□□□ -0.28
CD48-203ENST00000613788 CISD2Q8N5K1 135 aaKnown RBP13.31□□□□□ -0.28
CD48-203ENST00000613788 POC1BQ8TC44 478 aa13.31□□□□□ -0.28
CD48-203ENST00000613788 PYDC1Q8WXC3 89 aa13.31□□□□□ -0.28
CD48-203ENST00000613788 SLC38A4Q969I6 547 aa13.31□□□□□ -0.28
CD48-203ENST00000613788 MPP4Q96JB8 637 aa13.31□□□□□ -0.28
CD48-203ENST00000613788 NMNAT1Q9HAN9 279 aaPredicted RBP13.31□□□□□ -0.28
CD48-203ENST00000613788 AGPAT4Q9NRZ5 378 aa13.31□□□□□ -0.28
CD48-203ENST00000613788 OSGIN1Q9UJX0 560 aa13.31□□□□□ -0.28
CD48-203ENST00000613788 TMED7-TICAM2A0A0A6YYA0 188 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 TRGV5A0A0B4J1U4 118 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms