RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 PTGES2Q9H7Z7 377 aa10.93□□□□□ -0.66
CLK4-215ENST00000611733 VNN3Q9NY84 501 aa10.93□□□□□ -0.66
CLK4-215ENST00000611733 AP4S1Q9Y587 144 aa10.93□□□□□ -0.66
CLK4-215ENST00000611733 LIPGQ9Y5X9 500 aa10.93□□□□□ -0.66
CLK4-215ENST00000611733 CACNA1BQ00975 2339 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 CCNA2P20248 432 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 LSM11P83369 360 aaKnown RBP eCLIP10.92□□□□□ -0.66
CLK4-215ENST00000611733 FOXF1Q12946 379 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 WDR88Q6ZMY6 472 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 RANBP3LQ86VV4 465 aaPredicted RBP10.92□□□□□ -0.66
CLK4-215ENST00000611733 LSMEM1Q8N8F7 131 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 ZNF559Q9BR84 538 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 ADAM19Q9H013 955 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 TESQ9UGI8 421 aaKnown RBP10.92□□□□□ -0.66
CLK4-215ENST00000611733 RIMS3Q9UJD0 308 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 DKKL1Q9UK85 242 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 SLC6A5Q9Y345 797 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 TESMINQ9Y4I5 508 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 ATRXP46100 2492 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 TACR3P29371 465 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 SRD5A2P31213 254 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 SLC6A8P48029 635 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 ZNF41P51814 821 aaPredicted RBP10.92□□□□□ -0.66
CLK4-215ENST00000611733 SUMO3P55854 103 aaPredicted RBP10.92□□□□□ -0.66
CLK4-215ENST00000611733 B3GALT5-AS1P59052 145 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 WBP2NLQ6ICG8 309 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 RPUSD3Q6P087 351 aaKnown RBP10.92□□□□□ -0.66
CLK4-215ENST00000611733 PLEKHM3Q6ZWE6 761 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 PIWIL3Q7Z3Z3 882 aaKnown RBP10.92□□□□□ -0.66
CLK4-215ENST00000611733 GDF7Q7Z4P5 450 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 P3H2Q8IVL5 708 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 NKAIN4Q8IVV8 208 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 OR52J3Q8NH60 311 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 RNF217Q8TC41 542 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 LRTOMTQ8WZ04 291 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 C3orf49Q96BT1 292 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 DNAJA3Q96EY1 480 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 SLC6A15Q9H2J7 730 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 TMEM27Q9HBJ8 222 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 S100A14Q9HCY8 104 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 ACER3Q9NUN7 267 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 TNFRSF10DQ9UBN6 386 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 SLC7A7Q9UM01 511 aa10.92□□□□□ -0.66
CLK4-215ENST00000611733 A0A0B4J2E0 115 aa10.91□□□□□ -0.66
CLK4-215ENST00000611733 A0A1B0GX12 115 aa10.91□□□□□ -0.66
CLK4-215ENST00000611733 FAAHO00519 579 aa10.91□□□□□ -0.66
CLK4-215ENST00000611733 GP1BBP13224 206 aa10.91□□□□□ -0.66
CLK4-215ENST00000611733 SLC1A3P43003 542 aa10.91□□□□□ -0.66
CLK4-215ENST00000611733 IST1P53990 364 aa10.91□□□□□ -0.66
CLK4-215ENST00000611733 TAS2R41P59536 307 aa10.91□□□□□ -0.66
CLK4-215ENST00000611733 COPZ1P61923 177 aa10.91□□□□□ -0.66
CLK4-215ENST00000611733 MERTKQ12866 999 aa10.91□□□□□ -0.66
CLK4-215ENST00000611733 TMEM44Q2T9K0 475 aa10.91□□□□□ -0.66
CLK4-215ENST00000611733 CMPK2Q5EBM0 449 aa10.91□□□□□ -0.66
CLK4-215ENST00000611733 AMIGO2Q86SJ2 522 aa10.91□□□□□ -0.66
CLK4-215ENST00000611733 ZNF605Q86T29 641 aa10.91□□□□□ -0.66
CLK4-215ENST00000611733 SLC22A16Q86VW1 577 aa10.91□□□□□ -0.66
CLK4-215ENST00000611733 ADGRG3Q86Y34 549 aa10.91□□□□□ -0.66
CLK4-215ENST00000611733 LILRA2Q8N149 483 aa10.91□□□□□ -0.66
CLK4-215ENST00000611733 FAM98AQ8NCA5 519 aaKnown RBP10.91□□□□□ -0.66
CLK4-215ENST00000611733 OR14L1PQ8NHC6 308 aa10.91□□□□□ -0.66
CLK4-215ENST00000611733 SLC41A3Q96GZ6 507 aa10.91□□□□□ -0.66
CLK4-215ENST00000611733 PRSS27Q9BQR3 290 aa10.91□□□□□ -0.66
CLK4-215ENST00000611733 TRIM2Q9C040 744 aa10.91□□□□□ -0.66
CLK4-215ENST00000611733 NMNAT1Q9HAN9 279 aaPredicted RBP10.91□□□□□ -0.66
CLK4-215ENST00000611733 MAN2C1Q9NTJ4 1040 aa10.91□□□□□ -0.66
CLK4-215ENST00000611733 ARMC1Q9NVT9 282 aa10.91□□□□□ -0.66
CLK4-215ENST00000611733 OSGIN1Q9UJX0 560 aa10.91□□□□□ -0.66
CLK4-215ENST00000611733 ACAD8Q9UKU7 415 aa10.91□□□□□ -0.66
CLK4-215ENST00000611733 RRP15Q9Y3B9 282 aaKnown RBP10.91□□□□□ -0.66
CLK4-215ENST00000611733 ZNF337Q9Y3M9 751 aa10.91□□□□□ -0.66
CLK4-215ENST00000611733 MED12Q93074 2177 aa10.91□□□□□ -0.66
CLK4-215ENST00000611733 EPG5Q9HCE0 2579 aa10.91□□□□□ -0.66
CLK4-215ENST00000611733 OR2M5A3KFT3 312 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 NPIPA5E9PKD4 350 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 FMO6PO60774 539 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 HPNP05981 417 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 ZNF24P17028 368 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 RHCEP18577 417 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 STARP49675 285 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 SLC10A1Q14973 349 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 ALG10BQ5I7T1 473 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 HMBOX1Q6NT76 420 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 TBPL2Q6SJ96 375 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 ATG4DQ86TL0 474 aaPredicted RBP10.9□□□□□ -0.66
CLK4-215ENST00000611733 SIAH3Q8IW03 269 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 FAM109AQ8N4B1 249 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 ATP6V1C2Q8NEY4 427 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 PRRC1Q96M27 445 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 PIP5K1AQ99755 562 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 OR2B2Q9GZK3 357 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 TMEM185BQ9H7F4 350 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 ZDHHC11Q9H8X9 412 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 NPIPA1Q9UND3 350 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 FAM32AQ9Y421 112 aaKnown RBP10.9□□□□□ -0.66
CLK4-215ENST00000611733 U3KQV3 271 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 TRAPPC13A5PLN9 417 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 H0Y3Z8 333 aa10.9□□□□□ -0.66
CLK4-215ENST00000611733 ETV2O00321 342 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms