RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	SPIN1	Q9Y657	262 aa	Predicted RBP	12.84	□□□□□ -0.35
COPS7B-223	ENST00000611614	SGK494	L7N484	410 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	SLC30A4	O14863	429 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	KLF4	O43474	513 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	NDUFB5	O43674	189 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	GAA	P10253	952 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	DUSP8	Q13202	625 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	TPBG	Q13641	420 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	FAM53B	Q14153	422 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	GRM7	Q14831	915 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	FLYWCH1	Q4VC44	716 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	EIPR1	Q53HC9	387 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	CLEC12A	Q5QGZ9	265 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	PRSS41	Q7RTY9	318 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	KMT5C	Q86Y97	462 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	NRM	Q8IXM6	262 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	GPR135	Q8IZ08	494 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	SDF2	Q99470	211 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	PIGU	Q9H490	435 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	PLSCR3	Q9NRY6	295 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	IL20	Q9NYY1	176 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	BOLA1	Q9Y3E2	137 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	PCDHGB7	Q9Y5F8	929 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	TMEM131	Q92545	1883 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	TTC28	Q96AY4	2481 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	LINC00854	A0A1B0GVQ3	168 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	PLD2	O14939	933 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	KHNYN	O15037	678 aa	Known RBP	12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	SOX18	P35713	384 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	MPL	P40238	635 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	KIR2DL3	P43628	341 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	GPR4	P46093	362 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	DUSP3	P51452	185 aa	Predicted RBP	12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	RAB25	P57735	213 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	EEF1A1	P68104	462 aa	Known RBP	12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	TMEM44	Q2T9K0	475 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	TRMT12	Q53H54	448 aa	Known RBP	12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	FHL5	Q5TD97	284 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	TRIQK	Q629K1	86 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	GUSBP11	Q6P575	273 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	QSOX2	Q6ZRP7	698 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	C19orf18	Q8NEA5	215 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	DUSP18	Q8NEJ0	188 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	OR9A4	Q8NGU2	314 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	OR2I1P	Q8NGU4	316 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	OR4Q3	Q8NH05	313 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	LOXL4	Q96JB6	756 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	FYTTD1	Q96QD9	318 aa	Known RBP	12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	COQ7	Q99807	217 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	MED17	Q9NVC6	651 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	MUC3A	Q02505	3323 aa		12.83	□□□□□ -0.36
COPS7B-223	ENST00000611614	SURF4	O15260	269 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	PLA2G10	O15496	165 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	PIP5K1C	O60331	668 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	RDH16	O75452	317 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	OR2B3	O76000	313 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	APOL3	O95236	402 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	THBS1	P07996	1170 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	PRKAR1A	P10644	381 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	FGF9	P31371	208 aa	Predicted RBP	12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	SHC2	P98077	582 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	MXD1	Q05195	221 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	FAP	Q12884	760 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	TNK1	Q13470	666 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	EXOSC6	Q5RKV6	272 aa	Known RBP	12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	OR2G6	Q5TZ20	316 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	C22orf42	Q6IC83	251 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	SLC30A6	Q6NXT4	461 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	TMEM71	Q6P5X7	295 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	POGLUT1	Q8NBL1	392 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	UBASH3B	Q8TF42	649 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	TMEM255B	Q8WV15	326 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	RFK	Q969G6	155 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	MED30	Q96HR3	178 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	SOST	Q9BQB4	213 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	ZNF350	Q9GZX5	532 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	ARRDC1-AS1	Q9H2J1	176 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	KRCC1	Q9NPI7	259 aa	Predicted RBP	12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	RBFOX1	Q9NWB1	397 aa	Known RBP	12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	SLC7A7	Q9UM01	511 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	MRPS33	Q9Y291	106 aa	Known RBP	12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	TNRC6B	Q9UPQ9	1833 aa	Known RBP	12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614		A0A0A6YYC8	382 aa	Predicted RBP	12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614		I3L1I5	382 aa	Predicted RBP	12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	TOX3	O15405	576 aa	Predicted RBP	12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	C1QB	P02746	253 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	GZMK	P49863	264 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	ZNF136	P52737	540 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	CDH11	P55287	796 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	ID2	Q02363	134 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	RIN1	Q13671	783 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	GPR68	Q15743	365 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	PGGHG	Q32M88	737 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	AADACL4	Q5VUY2	407 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	ZC3H14	Q6PJT7	736 aa	Known RBP	12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	ZNF620	Q6ZNG0	422 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	ZNF767P	Q75MW2	155 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	PRSS42	Q7Z5A4	293 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	CA13	Q8N1Q1	262 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	ZNF619	Q8N2I2	560 aa		12.82	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms