RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 IGF1P05019 195 aa3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 PCCBP05166 539 aa3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 S100A5P33763 92 aa3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 RDXP35241 583 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 EPS15P42566 896 aa3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 LIM2P55344 173 aa3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 SPAG1Q07617 926 aa3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 HADHQ16836 314 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 TPD52L1Q16890 204 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 TTC19Q6DKK2 380 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 BLOC1S2Q6QNY1 142 aa3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 C6orf89Q6UWU4 347 aa3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 CCDC80Q76M96 950 aa3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 ZNF677Q86XU0 584 aa3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 ERO1BQ86YB8 467 aa3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 GRAMD2AQ8IUY3 354 aa3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 PSTKQ8IV42 348 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 SLC7A5P1Q8MH63 180 aa3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 TRIML2Q8N7C3 387 aa3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 OR13C2Q8NGS9 318 aa3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 ARNTL2Q8WYA1 636 aa3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 NT5C3BQ969T7 300 aa3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 MYLPFQ96A32 169 aa3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 TMIGD2Q96BF3 282 aa3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 RIOK1Q9BRS2 568 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 DUSP16Q9BY84 665 aa3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 SLITRK2Q9H156 845 aa3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 RIBC2Q9H4K1 309 aa3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 XKR8Q9H6D3 395 aa3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 FARSBQ9NSD9 589 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 MOKQ9UQ07 419 aa3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 PPIAL4AQ9Y536 164 aa3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 ANKRD30BQ9BXX2 1392 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 NCF1BA6NI72 391 aaPredicted RBP3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 DHRS7CA6NNS2 312 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 NCF1CA8MVU1 366 aaPredicted RBP3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 E9PBE3 544 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 HAT1O14929 419 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 ERLIN1O75477 346 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 CABYRO75952 493 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 B3GAT3O94766 335 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 IVLP07476 585 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 TPM1P09493 284 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 CCDC166P0CW27 439 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 ZP3P21754 424 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 UGT1A3P35503 534 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 ST3GAL3Q11203 375 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 ARHGAP19Q14CB8 494 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 RNF212Q495C1 297 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 SBK1Q52WX2 424 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 PRR30Q53SZ7 412 aaPredicted RBP3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 RSBN1Q5VWQ0 802 aaPredicted RBP3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 OR5M10Q6IEU7 315 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 ACSM5Q6NUN0 579 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 APTXQ7Z2E3 356 aaKnown RBP3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 MTERF4Q7Z6M4 381 aaKnown RBP3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 FBXO16Q8IX29 292 aaPredicted RBP3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 BBS5Q8N3I7 341 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 STEAP2Q8NFT2 490 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 THRSPQ92748 146 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 PEX13Q92968 403 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 ZBED3Q96IU2 234 aaPredicted RBP3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 ATP6V1G3Q96LB4 118 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 OR5B2Q96R09 309 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 MAPKAP1Q9BPZ7 522 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 ZSCAN5AQ9BUG6 496 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 C19orf24Q9BVV8 132 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 CRNKL1Q9BZJ0 848 aaKnown RBP3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 PPDPFQ9H3Y8 114 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 C8orf33Q9H7E9 229 aaPredicted RBP3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 CAB39LQ9H9S4 337 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 PALMDQ9NP74 551 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 RPRD1BQ9NQG5 326 aaKnown RBP3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 SMPD3Q9NY59 655 aaPredicted RBP3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 SPRR3Q9UBC9 169 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 B4GALT7Q9UBV7 327 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 PDE10AQ9Y233 779 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 GMEB1Q9Y692 573 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 MYO3BQ8WXR4 1341 aa3.13□□□□□ -1.91
SMCHD1-213ENST00000609587 PLEKHG2Q9H7P9 1386 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 A8MUI8 341 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 PPIAL4DF5H284 164 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 WWP2O00308 870 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 FCN1O00602 326 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 OR7A17O14581 309 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 DNALI1O14645 258 aaPredicted RBP3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 GPX5O75715 221 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 UFL1O94874 794 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 F10P00742 488 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 P0C879 139 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 TROVE2P10155 538 aaKnown RBP eCLIP3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 HPGDP15428 266 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 SERPINA2P20848 420 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 DRD5P21918 477 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 PRKACBP22694 351 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 CPN2P22792 545 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 ADORA2BP29275 332 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 RPL29P47914 159 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 PRRX1P54821 245 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 CARD18P57730 90 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms