RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 OR5B2Q96R09 309 aa11.86□□□□□ -0.51
POLR2J3-219ENST00000608621 REG4Q9BYZ8 158 aa11.86□□□□□ -0.51
POLR2J3-219ENST00000608621 LAT2Q9GZY6 243 aa11.86□□□□□ -0.51
POLR2J3-219ENST00000608621 QRSL1Q9H0R6 528 aaKnown RBP11.86□□□□□ -0.51
POLR2J3-219ENST00000608621 L2HGDHQ9H9P8 463 aa11.86□□□□□ -0.51
POLR2J3-219ENST00000608621 KCNE5Q9UJ90 142 aa11.86□□□□□ -0.51
POLR2J3-219ENST00000608621 MAGED1Q9Y5V3 778 aaPredicted RBP11.86□□□□□ -0.51
POLR2J3-219ENST00000608621 DUXAA6NLW8 204 aa11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 ETV2O00321 342 aaPredicted RBP11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 SMAD9O15198 467 aaKnown RBP11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 FCMRO60667 390 aa11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 CYTIPO60759 359 aa11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 RAMP1O60894 148 aa11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 NDUFS7O75251 213 aa11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 H6PDO95479 791 aa11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 G6PDP11413 515 aa11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 SOAT1P35610 550 aa11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 ACVR1BP36896 505 aa11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 SESN3P58005 492 aa11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 RPS26P62854 115 aaKnown RBP11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 FAPQ12884 760 aa11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 STK11Q15831 433 aa11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 ZNF141Q15928 474 aa11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 PGGHGQ32M88 737 aa11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 BHLHB9Q6PI77 547 aa11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 SEZ6L2Q6UXD5 910 aa11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 CLEC4FQ8N1N0 589 aa11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 ZNF75CPQ92670 426 aaPredicted RBP11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 ARL8AQ96BM9 186 aa11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 TUBGCP3Q96CW5 907 aa11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 ZNF300Q96RE9 604 aaPredicted RBP11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 POTEKPQ9BYX7 375 aa11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 TRIM2Q9C040 744 aa11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 NMUR2Q9GZQ4 415 aa11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 SLCO5A1Q9H2Y9 848 aa11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 SERHL2Q9H4I8 314 aa11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 SERINC1Q9NRX5 453 aa11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 CISD1Q9NZ45 108 aaKnown RBP11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 MKLN1Q9UL63 735 aa11.85□□□□□ -0.51
POLR2J3-219ENST00000608621 ALPK2Q86TB3 2170 aa11.84□□□□□ -0.51
POLR2J3-219ENST00000608621 SONP18583 2426 aaKnown RBP11.84□□□□□ -0.51
POLR2J3-219ENST00000608621 ZNF724A8MTY0 619 aa11.84□□□□□ -0.51
POLR2J3-219ENST00000608621 DNAJA2O60884 412 aa11.84□□□□□ -0.51
POLR2J3-219ENST00000608621 STX11O75558 287 aa11.84□□□□□ -0.51
POLR2J3-219ENST00000608621 UGT2B17O75795 530 aa11.84□□□□□ -0.51
POLR2J3-219ENST00000608621 CSTAP01040 98 aa11.84□□□□□ -0.51
POLR2J3-219ENST00000608621 CD8AP01732 235 aa11.84□□□□□ -0.51
POLR2J3-219ENST00000608621 FESP07332 822 aa11.84□□□□□ -0.51
POLR2J3-219ENST00000608621 SERPINB5P36952 375 aa11.84□□□□□ -0.51
POLR2J3-219ENST00000608621 CLDN8P56748 225 aa11.84□□□□□ -0.51
POLR2J3-219ENST00000608621 EMX2Q04743 252 aa11.84□□□□□ -0.51
POLR2J3-219ENST00000608621 SKP2Q13309 424 aa11.84□□□□□ -0.51
POLR2J3-219ENST00000608621 PPA1Q15181 289 aa11.84□□□□□ -0.51
POLR2J3-219ENST00000608621 ETFDHQ16134 617 aa11.84□□□□□ -0.51
POLR2J3-219ENST00000608621 ARHGAP11BQ3KRB8 267 aa11.84□□□□□ -0.51
POLR2J3-219ENST00000608621 OR4F3Q6IEY1 312 aa11.84□□□□□ -0.51
POLR2J3-219ENST00000608621 HEPHL1Q6MZM0 1159 aa11.84□□□□□ -0.51
POLR2J3-219ENST00000608621 C3orf33Q6P1S2 294 aa11.84□□□□□ -0.51
POLR2J3-219ENST00000608621 TMPPEQ6ZT21 453 aa11.84□□□□□ -0.51
POLR2J3-219ENST00000608621 GALNT5Q7Z7M9 940 aa11.84□□□□□ -0.51
POLR2J3-219ENST00000608621 ZNF100Q8IYN0 542 aa11.84□□□□□ -0.51
POLR2J3-219ENST00000608621 CLECL1Q8IZS7 167 aa11.84□□□□□ -0.51
POLR2J3-219ENST00000608621 RIBC1Q8N443 379 aaPredicted RBP11.84□□□□□ -0.51
POLR2J3-219ENST00000608621 MUCL1Q96DR8 90 aa11.84□□□□□ -0.51
POLR2J3-219ENST00000608621 COL6A5A8TX70 2615 aa11.83□□□□□ -0.52
POLR2J3-219ENST00000608621 ABCA1O95477 2261 aa11.83□□□□□ -0.52
POLR2J3-219ENST00000608621 CHD3Q12873 2000 aaKnown RBP11.83□□□□□ -0.52
POLR2J3-219ENST00000608621 CENPVL1A0A0U1RR11 272 aa11.83□□□□□ -0.52
POLR2J3-219ENST00000608621 SULT2B1O00204 365 aa11.83□□□□□ -0.52
POLR2J3-219ENST00000608621 PGM3O95394 542 aa11.83□□□□□ -0.52
POLR2J3-219ENST00000608621 AK1P00568 194 aa11.83□□□□□ -0.52
POLR2J3-219ENST00000608621 IGHV4-39P01824 125 aa11.83□□□□□ -0.52
POLR2J3-219ENST00000608621 BPGMP07738 259 aa11.83□□□□□ -0.52
POLR2J3-219ENST00000608621 THBS1P07996 1170 aa11.83□□□□□ -0.52
POLR2J3-219ENST00000608621 UBTFL6P0CB48 400 aaPredicted RBP11.83□□□□□ -0.52
POLR2J3-219ENST00000608621 CREB1P16220 341 aa11.83□□□□□ -0.52
POLR2J3-219ENST00000608621 PGCP20142 388 aa11.83□□□□□ -0.52
POLR2J3-219ENST00000608621 PTNP21246 168 aa11.83□□□□□ -0.52
POLR2J3-219ENST00000608621 IGHV1-2P23083 117 aa11.83□□□□□ -0.52
POLR2J3-219ENST00000608621 DIO1P49895 249 aa11.83□□□□□ -0.52
POLR2J3-219ENST00000608621 CASP9P55211 416 aa11.83□□□□□ -0.52
POLR2J3-219ENST00000608621 C21orf58P58505 322 aa11.83□□□□□ -0.52
POLR2J3-219ENST00000608621 MERTKQ12866 999 aa11.83□□□□□ -0.52
POLR2J3-219ENST00000608621 MAD2L1Q13257 205 aaPredicted RBP11.83□□□□□ -0.52
POLR2J3-219ENST00000608621 TMEM234Q8WY98 164 aa11.83□□□□□ -0.52
POLR2J3-219ENST00000608621 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.83□□□□□ -0.52
POLR2J3-219ENST00000608621 ST8SIA1Q92185 356 aa11.83□□□□□ -0.52
POLR2J3-219ENST00000608621 SLC35G5Q96KT7 338 aa11.83□□□□□ -0.52
POLR2J3-219ENST00000608621 TRAF4Q9BUZ4 470 aaPredicted RBP11.83□□□□□ -0.52
POLR2J3-219ENST00000608621 OR51I1Q9H343 314 aa11.83□□□□□ -0.52
POLR2J3-219ENST00000608621 ALG2Q9H553 416 aa11.83□□□□□ -0.52
POLR2J3-219ENST00000608621 ACER3Q9NUN7 267 aa11.83□□□□□ -0.52
POLR2J3-219ENST00000608621 LGALS13Q9UHV8 139 aa11.83□□□□□ -0.52
POLR2J3-219ENST00000608621 GDF2Q9UK05 429 aaPredicted RBP11.83□□□□□ -0.52
POLR2J3-219ENST00000608621 RNF103-CHMP3A0A140T963 221 aa11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 SHISA9B4DS77 424 aa11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 ADAM11O75078 769 aa11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 CPSF4O95639 269 aaKnown RBP11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 TP53P04637 393 aaPredicted RBP11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 NUDT17P0C025 328 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms