RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 CTPS2Q9NRF8 586 aa12.97□□□□□ -0.33
HDDC2-204ENST00000608295 POLE3Q9NRF9 147 aa12.97□□□□□ -0.33
HDDC2-204ENST00000608295 RLIMQ9NVW2 624 aa12.97□□□□□ -0.33
HDDC2-204ENST00000608295 JKAMPQ9P055 326 aa12.97□□□□□ -0.33
HDDC2-204ENST00000608295 SLAMF8Q9P0V8 285 aa12.97□□□□□ -0.33
HDDC2-204ENST00000608295 PROCRQ9UNN8 238 aa12.97□□□□□ -0.33
HDDC2-204ENST00000608295 SLC35A3Q9Y2D2 325 aa12.97□□□□□ -0.33
HDDC2-204ENST00000608295 PCDHB14Q9Y5E9 798 aa12.97□□□□□ -0.33
HDDC2-204ENST00000608295 ANKRD17O75179 2603 aaKnown RBP12.96□□□□□ -0.33
HDDC2-204ENST00000608295 CSMD2Q7Z408 3487 aa12.96□□□□□ -0.33
HDDC2-204ENST00000608295 GKN3PP0CG01 181 aa12.96□□□□□ -0.33
HDDC2-204ENST00000608295 IL7RP16871 459 aa12.96□□□□□ -0.33
HDDC2-204ENST00000608295 PGCP20142 388 aa12.96□□□□□ -0.33
HDDC2-204ENST00000608295 CCKARP32238 428 aa12.96□□□□□ -0.33
HDDC2-204ENST00000608295 IDH2P48735 452 aaKnown RBP12.96□□□□□ -0.33
HDDC2-204ENST00000608295 SQLEQ14534 574 aa12.96□□□□□ -0.33
HDDC2-204ENST00000608295 MAPK11Q15759 364 aa12.96□□□□□ -0.33
HDDC2-204ENST00000608295 PDSS1Q5T2R2 415 aa12.96□□□□□ -0.33
HDDC2-204ENST00000608295 C3orf33Q6P1S2 294 aa12.96□□□□□ -0.33
HDDC2-204ENST00000608295 ZNF836Q6ZNA1 936 aa12.96□□□□□ -0.33
HDDC2-204ENST00000608295 MSANTD1Q6ZTZ1 278 aa12.96□□□□□ -0.33
HDDC2-204ENST00000608295 PLEKHM3Q6ZWE6 761 aa12.96□□□□□ -0.33
HDDC2-204ENST00000608295 ZNF550Q7Z398 422 aa12.96□□□□□ -0.33
HDDC2-204ENST00000608295 KIF18BQ86Y91 864 aa12.96□□□□□ -0.33
HDDC2-204ENST00000608295 MSRB3Q8IXL7 192 aa12.96□□□□□ -0.33
HDDC2-204ENST00000608295 C10orf111Q8N326 155 aa12.96□□□□□ -0.33
HDDC2-204ENST00000608295 REXO5Q96IC2 774 aaKnown RBP12.96□□□□□ -0.33
HDDC2-204ENST00000608295 MRGPRX4Q96LA9 322 aa12.96□□□□□ -0.33
HDDC2-204ENST00000608295 TMEM120AQ9BXJ8 343 aa12.96□□□□□ -0.33
HDDC2-204ENST00000608295 POLDIP3Q9BY77 421 aaKnown RBP12.96□□□□□ -0.33
HDDC2-204ENST00000608295 OR11A1Q9GZK7 315 aa12.96□□□□□ -0.33
HDDC2-204ENST00000608295 SAP130Q9H0E3 1048 aa12.96□□□□□ -0.33
HDDC2-204ENST00000608295 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.96□□□□□ -0.33
HDDC2-204ENST00000608295 FGFR1OP2Q9NVK5 253 aa12.96□□□□□ -0.33
HDDC2-204ENST00000608295 KLHL28Q9NXS3 571 aa12.96□□□□□ -0.33
HDDC2-204ENST00000608295 DNAJB12Q9NXW2 375 aaKnown RBP12.96□□□□□ -0.33
HDDC2-204ENST00000608295 SLC25A37Q9NYZ2 338 aa12.96□□□□□ -0.33
HDDC2-204ENST00000608295 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.96□□□□□ -0.33
HDDC2-204ENST00000608295 FOXD3Q9UJU5 478 aaPredicted RBP12.96□□□□□ -0.33
HDDC2-204ENST00000608295 EMC9Q9Y3B6 208 aa12.96□□□□□ -0.33
HDDC2-204ENST00000608295 AKAP6Q13023 2319 aa12.96□□□□□ -0.34
HDDC2-204ENST00000608295 MYO9AB2RTY4 2548 aa12.95□□□□□ -0.34
HDDC2-204ENST00000608295 SH3D21A4FU49 640 aa12.95□□□□□ -0.34
HDDC2-204ENST00000608295 AGAP5A6NIR3 686 aa12.95□□□□□ -0.34
HDDC2-204ENST00000608295 A8MXE2 369 aa12.95□□□□□ -0.34
HDDC2-204ENST00000608295 CLIC1O00299 241 aa12.95□□□□□ -0.34
HDDC2-204ENST00000608295 ADAMDEC1O15204 470 aa12.95□□□□□ -0.34
HDDC2-204ENST00000608295 FRS3O43559 492 aa12.95□□□□□ -0.34
HDDC2-204ENST00000608295 POU2F1P14859 743 aa12.95□□□□□ -0.34
HDDC2-204ENST00000608295 ENPP1P22413 925 aa12.95□□□□□ -0.34
HDDC2-204ENST00000608295 CRISP3P54108 245 aa12.95□□□□□ -0.34
HDDC2-204ENST00000608295 ALKBH2Q6NS38 261 aa12.95□□□□□ -0.34
HDDC2-204ENST00000608295 BLOC1S3Q6QNY0 202 aa12.95□□□□□ -0.34
HDDC2-204ENST00000608295 ZNF474Q6S9Z5 364 aaPredicted RBP12.95□□□□□ -0.34
HDDC2-204ENST00000608295 LRRC74BQ6ZQY2 392 aa12.95□□□□□ -0.34
HDDC2-204ENST00000608295 FAM214BQ7L5A3 538 aa12.95□□□□□ -0.34
HDDC2-204ENST00000608295 FAM71CQ8NEG0 241 aa12.95□□□□□ -0.34
HDDC2-204ENST00000608295 ZNF775Q96BV0 537 aaPredicted RBP12.95□□□□□ -0.34
HDDC2-204ENST00000608295 KLHL4Q9C0H6 718 aa12.95□□□□□ -0.34
HDDC2-204ENST00000608295 CLEC4MQ9H2X3 399 aaPredicted RBP12.95□□□□□ -0.34
HDDC2-204ENST00000608295 LIME1Q9H400 295 aa12.95□□□□□ -0.34
HDDC2-204ENST00000608295 LIPT1Q9Y234 373 aa12.95□□□□□ -0.34
HDDC2-204ENST00000608295 PDZD2O15018 2839 aa12.94□□□□□ -0.34
HDDC2-204ENST00000608295 A0A096LPI6 279 aa12.94□□□□□ -0.34
HDDC2-204ENST00000608295 TMEM247A6NEH6 219 aa12.94□□□□□ -0.34
HDDC2-204ENST00000608295 GJE1A6NN92 205 aa12.94□□□□□ -0.34
HDDC2-204ENST00000608295 A6NNC1 897 aa12.94□□□□□ -0.34
HDDC2-204ENST00000608295 MSTNO14793 375 aa12.94□□□□□ -0.34
HDDC2-204ENST00000608295 CTAG2O75638 210 aa12.94□□□□□ -0.34
HDDC2-204ENST00000608295 ZCCHC18P0CG32 403 aa12.94□□□□□ -0.34
HDDC2-204ENST00000608295 HOXB9P17482 250 aaPredicted RBP12.94□□□□□ -0.34
HDDC2-204ENST00000608295 RPS4Y1P22090 263 aaKnown RBP12.94□□□□□ -0.34
HDDC2-204ENST00000608295 AGTR1P30556 359 aa12.94□□□□□ -0.34
HDDC2-204ENST00000608295 CD79BP40259 229 aa12.94□□□□□ -0.34
HDDC2-204ENST00000608295 GUCY1A3Q02108 690 aa12.94□□□□□ -0.34
HDDC2-204ENST00000608295 RGNQ15493 299 aa12.94□□□□□ -0.34
HDDC2-204ENST00000608295 SYT14P1Q58G82 188 aa12.94□□□□□ -0.34
HDDC2-204ENST00000608295 FCRLAQ7L513 359 aa12.94□□□□□ -0.34
HDDC2-204ENST00000608295 LURAP1LQ8IV03 231 aa12.94□□□□□ -0.34
HDDC2-204ENST00000608295 PEX5LQ8IYB4 626 aa12.94□□□□□ -0.34
HDDC2-204ENST00000608295 CADM2Q8N3J6 435 aa12.94□□□□□ -0.34
HDDC2-204ENST00000608295 OR52P1PQ8NH57 321 aa12.94□□□□□ -0.34
HDDC2-204ENST00000608295 NFKBIDQ8NI38 313 aa12.94□□□□□ -0.34
HDDC2-204ENST00000608295 RNF128Q8TEB7 428 aa12.94□□□□□ -0.34
HDDC2-204ENST00000608295 FAM222BQ8WU58 562 aa12.94□□□□□ -0.34
HDDC2-204ENST00000608295 SLC38A5Q8WUX1 472 aa12.94□□□□□ -0.34
HDDC2-204ENST00000608295 TMEM234Q8WY98 164 aa12.94□□□□□ -0.34
HDDC2-204ENST00000608295 ST8SIA1Q92185 356 aa12.94□□□□□ -0.34
HDDC2-204ENST00000608295 CPNE4Q96A23 557 aaPredicted RBP12.94□□□□□ -0.34
HDDC2-204ENST00000608295 GMPPAQ96IJ6 420 aaPredicted RBP12.94□□□□□ -0.34
HDDC2-204ENST00000608295 ACER3Q9NUN7 267 aa12.94□□□□□ -0.34
HDDC2-204ENST00000608295 VAPAQ9P0L0 249 aa12.94□□□□□ -0.34
HDDC2-204ENST00000608295 C6orf203Q9P0P8 240 aaPredicted RBP12.94□□□□□ -0.34
HDDC2-204ENST00000608295 ZNF443Q9Y2A4 671 aaPredicted RBP12.94□□□□□ -0.34
HDDC2-204ENST00000608295 FREM1Q5H8C1 2179 aa12.93□□□□□ -0.34
HDDC2-204ENST00000608295 C5orf58C9J3I9 102 aa12.93□□□□□ -0.34
HDDC2-204ENST00000608295 SS18L1O75177 396 aaPredicted RBP12.93□□□□□ -0.34
HDDC2-204ENST00000608295 CGAP01215 116 aa12.93□□□□□ -0.34
HDDC2-204ENST00000608295 CRHP06850 196 aa12.93□□□□□ -0.34
HDDC2-204ENST00000608295 DBIP07108 87 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms