RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 FAM234BA2RU67 622 aa17.21■□□□□ 0.35
SGMS1-208ENST00000608287 HMGN4O00479 90 aa17.21■□□□□ 0.35
SGMS1-208ENST00000608287 PHF1O43189 567 aaPredicted RBP17.21■□□□□ 0.35
SGMS1-208ENST00000608287 CRHP06850 196 aa17.21■□□□□ 0.35
SGMS1-208ENST00000608287 UBL4AP11441 157 aa17.21■□□□□ 0.35
SGMS1-208ENST00000608287 ANXA11P50995 505 aaKnown RBP17.21■□□□□ 0.35
SGMS1-208ENST00000608287 CLDN15P56746 228 aa17.21■□□□□ 0.35
SGMS1-208ENST00000608287 HPCAP84074 193 aa17.21■□□□□ 0.35
SGMS1-208ENST00000608287 FUT5Q11128 374 aa17.21■□□□□ 0.35
SGMS1-208ENST00000608287 ZNF141Q15928 474 aa17.21■□□□□ 0.35
SGMS1-208ENST00000608287 GPAT3Q53EU6 434 aa17.21■□□□□ 0.35
SGMS1-208ENST00000608287 MSANTD1Q6ZTZ1 278 aa17.21■□□□□ 0.35
SGMS1-208ENST00000608287 GTPBP8Q8N3Z3 284 aaPredicted RBP17.21■□□□□ 0.35
SGMS1-208ENST00000608287 TMCO5AQ8N6Q1 288 aa17.21■□□□□ 0.35
SGMS1-208ENST00000608287 VPS33AQ96AX1 596 aa17.21■□□□□ 0.35
SGMS1-208ENST00000608287 INTS12Q96CB8 462 aaKnown RBP17.21■□□□□ 0.35
SGMS1-208ENST00000608287 ITCHQ96J02 903 aa17.21■□□□□ 0.35
SGMS1-208ENST00000608287 RNF145Q96MT1 663 aa17.21■□□□□ 0.35
SGMS1-208ENST00000608287 SLC39A3Q9BRY0 314 aa17.21■□□□□ 0.35
SGMS1-208ENST00000608287 ZNF446Q9NWS9 450 aa17.21■□□□□ 0.35
SGMS1-208ENST00000608287 KLHL28Q9NXS3 571 aa17.21■□□□□ 0.35
SGMS1-208ENST00000608287 KCNE5Q9UJ90 142 aa17.21■□□□□ 0.35
SGMS1-208ENST00000608287 C7orf72A4D263 438 aa17.2■□□□□ 0.34
SGMS1-208ENST00000608287 SERINC4A6NH21 518 aa17.2■□□□□ 0.34
SGMS1-208ENST00000608287 SLC22A20A6NK97 555 aa17.2■□□□□ 0.34
SGMS1-208ENST00000608287 ZNF264O43296 627 aa17.2■□□□□ 0.34
SGMS1-208ENST00000608287 KIAA0513O60268 411 aa17.2■□□□□ 0.34
SGMS1-208ENST00000608287 UGT2B17O75795 530 aa17.2■□□□□ 0.34
SGMS1-208ENST00000608287 KRT75O95678 551 aa17.2■□□□□ 0.34
SGMS1-208ENST00000608287 TGM6O95932 706 aa17.2■□□□□ 0.34
SGMS1-208ENST00000608287 SUMO3P55854 103 aaPredicted RBP17.2■□□□□ 0.34
SGMS1-208ENST00000608287 RPS3AP61247 264 aaKnown RBP17.2■□□□□ 0.34
SGMS1-208ENST00000608287 KRTAP1-1Q07627 177 aa17.2■□□□□ 0.34
SGMS1-208ENST00000608287 FOXF2Q12947 444 aa17.2■□□□□ 0.34
SGMS1-208ENST00000608287 C6orf10Q5SRN2 563 aa17.2■□□□□ 0.34
SGMS1-208ENST00000608287 TYW3Q6IPR3 259 aaKnown RBP17.2■□□□□ 0.34
SGMS1-208ENST00000608287 GCNT2Q8N0V5 402 aa17.2■□□□□ 0.34
SGMS1-208ENST00000608287 THOC1Q96FV9 657 aaKnown RBP17.2■□□□□ 0.34
SGMS1-208ENST00000608287 WFIKKN1Q96NZ8 548 aa17.2■□□□□ 0.34
SGMS1-208ENST00000608287 PINK1Q9BXM7 581 aa17.2■□□□□ 0.34
SGMS1-208ENST00000608287 POLE3Q9NRF9 147 aa17.2■□□□□ 0.34
SGMS1-208ENST00000608287 SLC6A13Q9NSD5 602 aa17.2■□□□□ 0.34
SGMS1-208ENST00000608287 ELOVL5Q9NYP7 299 aa17.2■□□□□ 0.34
SGMS1-208ENST00000608287 ICAM5Q9UMF0 924 aa17.2■□□□□ 0.34
SGMS1-208ENST00000608287 ABCA1O95477 2261 aa17.2■□□□□ 0.34
SGMS1-208ENST00000608287 CENPVL1A0A0U1RR11 272 aa17.19■□□□□ 0.34
SGMS1-208ENST00000608287 EIF1AYO14602 144 aaKnown RBP17.19■□□□□ 0.34
SGMS1-208ENST00000608287 CD5LO43866 347 aa17.19■□□□□ 0.34
SGMS1-208ENST00000608287 EIF4E2O60573 245 aaKnown RBP17.19■□□□□ 0.34
SGMS1-208ENST00000608287 CYP7B1O75881 506 aa17.19■□□□□ 0.34
SGMS1-208ENST00000608287 OPN1LWP04000 364 aa17.19■□□□□ 0.34
SGMS1-208ENST00000608287 LINGO3P0C6S8 592 aa17.19■□□□□ 0.34
SGMS1-208ENST00000608287 CD79BP40259 229 aa17.19■□□□□ 0.34
SGMS1-208ENST00000608287 CCR4P51679 360 aa17.19■□□□□ 0.34
SGMS1-208ENST00000608287 TXNL4AP83876 142 aaKnown RBP17.19■□□□□ 0.34
SGMS1-208ENST00000608287 FOXF1Q12946 379 aa17.19■□□□□ 0.34
SGMS1-208ENST00000608287 TNK1Q13470 666 aa17.19■□□□□ 0.34
SGMS1-208ENST00000608287 VEZF1Q14119 521 aa17.19■□□□□ 0.34
SGMS1-208ENST00000608287 SYPL1Q16563 259 aa17.19■□□□□ 0.34
SGMS1-208ENST00000608287 SGCBQ16585 318 aa17.19■□□□□ 0.34
SGMS1-208ENST00000608287 COX20Q5RI15 118 aa17.19■□□□□ 0.34
SGMS1-208ENST00000608287 OR2A2Q6IF42 318 aa17.19■□□□□ 0.34
SGMS1-208ENST00000608287 FRRS1Q6ZNA5 592 aa17.19■□□□□ 0.34
SGMS1-208ENST00000608287 BTLAQ7Z6A9 289 aa17.19■□□□□ 0.34
SGMS1-208ENST00000608287 GGNQ86UU5 652 aa17.19■□□□□ 0.34
SGMS1-208ENST00000608287 ZNF619Q8N2I2 560 aa17.19■□□□□ 0.34
SGMS1-208ENST00000608287 TOR1AIP2Q8NFQ8 470 aa17.19■□□□□ 0.34
SGMS1-208ENST00000608287 POC1BQ8TC44 478 aa17.19■□□□□ 0.34
SGMS1-208ENST00000608287 ZFP90Q8TF47 636 aa17.19■□□□□ 0.34
SGMS1-208ENST00000608287 TMEM185BQ9H7F4 350 aa17.19■□□□□ 0.34
SGMS1-208ENST00000608287 PRAMEF27A3QJZ7 478 aa17.18■□□□□ 0.34
SGMS1-208ENST00000608287 SIAH2O43255 324 aa17.18■□□□□ 0.34
SGMS1-208ENST00000608287 H6PDO95479 791 aa17.18■□□□□ 0.34
SGMS1-208ENST00000608287 CSTAP01040 98 aa17.18■□□□□ 0.34
SGMS1-208ENST00000608287 GUSBP08236 651 aa17.18■□□□□ 0.34
SGMS1-208ENST00000608287 ME2P23368 584 aa17.18■□□□□ 0.34
SGMS1-208ENST00000608287 PSMA4P25789 261 aaKnown RBP17.18■□□□□ 0.34
SGMS1-208ENST00000608287 EIF1P41567 113 aaKnown RBP17.18■□□□□ 0.34
SGMS1-208ENST00000608287 EIF1AXP47813 144 aaKnown RBP17.18■□□□□ 0.34
SGMS1-208ENST00000608287 MRPL19P49406 292 aaKnown RBP17.18■□□□□ 0.34
SGMS1-208ENST00000608287 CHRNEQ04844 493 aa17.18■□□□□ 0.34
SGMS1-208ENST00000608287 MAPK14Q16539 360 aa17.18■□□□□ 0.34
SGMS1-208ENST00000608287 PPP4R4Q6NUP7 873 aa17.18■□□□□ 0.34
SGMS1-208ENST00000608287 EIF3MQ7L2H7 374 aaKnown RBP17.18■□□□□ 0.34
SGMS1-208ENST00000608287 HMGN2P46Q86SG4 172 aa17.18■□□□□ 0.34
SGMS1-208ENST00000608287 METTL25Q8N6Q8 603 aa17.18■□□□□ 0.34
SGMS1-208ENST00000608287 ANKFN1Q8N957 763 aa17.18■□□□□ 0.34
SGMS1-208ENST00000608287 OR5W2Q8NH69 310 aa17.18■□□□□ 0.34
SGMS1-208ENST00000608287 GPR119Q8TDV5 335 aa17.18■□□□□ 0.34
SGMS1-208ENST00000608287 FIG4Q92562 907 aa17.18■□□□□ 0.34
SGMS1-208ENST00000608287 ZNF845Q96IR2 970 aaPredicted RBP17.18■□□□□ 0.34
SGMS1-208ENST00000608287 SAP130Q9H0E3 1048 aa17.18■□□□□ 0.34
SGMS1-208ENST00000608287 YAE1D1Q9NRH1 226 aa17.18■□□□□ 0.34
SGMS1-208ENST00000608287 CCDC167Q9P0B6 97 aa17.18■□□□□ 0.34
SGMS1-208ENST00000608287 LIPT1Q9Y234 373 aa17.18■□□□□ 0.34
SGMS1-208ENST00000608287 MED12LQ86YW9 2145 aa17.18■□□□□ 0.34
SGMS1-208ENST00000608287 HEATR5AQ86XA9 2040 aa17.18■□□□□ 0.34
SGMS1-208ENST00000608287 NR5A2O00482 541 aa17.17■□□□□ 0.34
SGMS1-208ENST00000608287 EDF1O60869 148 aaKnown RBP17.17■□□□□ 0.34
SGMS1-208ENST00000608287 UBTFL6P0CB48 400 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms