RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 ZDHHC21Q8IVQ6 265 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 SIAH3Q8IW03 269 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 POC1BQ8TC44 478 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 PHF10Q8WUB8 498 aaKnown RBP6.96□□□□□ -1.3
MSH6-211ENST00000606499 CANT1Q8WVQ1 401 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 SLC35B4Q969S0 331 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 RELTQ969Z4 430 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 SLCO4A1Q96BD0 722 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 SNRNP40Q96DI7 357 aaKnown RBP6.96□□□□□ -1.3
MSH6-211ENST00000606499 MCHR1Q99705 422 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 ZNF559Q9BR84 538 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 OR2B2Q9GZK3 357 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 DENND2DQ9H6A0 471 aaPredicted RBP6.96□□□□□ -1.3
MSH6-211ENST00000606499 ZDHHC11Q9H8X9 412 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 HHATLQ9HCP6 504 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 ACER3Q9NUN7 267 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 RHCGQ9UBD6 479 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 ANAPC2Q9UJX6 822 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 AURKCQ9UQB9 309 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 SLC6A5Q9Y345 797 aa6.96□□□□□ -1.3
MSH6-211ENST00000606499 UTP20O75691 2785 aaKnown RBP6.95□□□□□ -1.3
MSH6-211ENST00000606499 A0A087WZY1 265 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 A0A1B0GWA3 101 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 C7orf72A4D263 438 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 NPIPA5E9PKD4 350 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 ETV2O00321 342 aaPredicted RBP6.95□□□□□ -1.3
MSH6-211ENST00000606499 FFAR1O14842 300 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 ZNHIT1O43257 154 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 FMO6PO60774 539 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 ENTPD5O75356 428 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 LYPD3O95274 346 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 NTN1O95631 604 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 CRYABP02511 175 aaKnown RBP6.95□□□□□ -1.3
MSH6-211ENST00000606499 THY1P04216 161 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 PRB1P04280 392 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 FABP3P05413 133 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 GPIP06744 558 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 RAP2AP10114 183 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 GP1BBP13224 206 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 CCNA2P20248 432 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 TACR3P29371 465 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 SLC1A3P43003 542 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 MLLT10P55197 1068 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 GFRA1P56159 465 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 ACTR3P61158 418 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 COPZ1P61923 177 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 HSF1Q00613 529 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 MERTKQ12866 999 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 FOXD4Q12950 439 aaPredicted RBP6.95□□□□□ -1.3
MSH6-211ENST00000606499 PIN1Q13526 163 aaPredicted RBP6.95□□□□□ -1.3
MSH6-211ENST00000606499 OR1Q1Q15612 314 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 TMEM44Q2T9K0 475 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 IQCCQ4KMZ1 466 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 FAM98BQ52LJ0 330 aaKnown RBP6.95□□□□□ -1.3
MSH6-211ENST00000606499 SLC25A53Q5H9E4 307 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 DCST1Q5T197 706 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 ZNF324BQ6AW86 544 aaPredicted RBP6.95□□□□□ -1.3
MSH6-211ENST00000606499 WBP2NLQ6ICG8 309 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 TRILQ7L0X0 811 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 GTPBP8Q8N3Z3 284 aaPredicted RBP6.95□□□□□ -1.3
MSH6-211ENST00000606499 LSMEM1Q8N8F7 131 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 RNF217Q8TC41 542 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 ADAMTS16Q8TE57 1224 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 ST8SIA1Q92185 356 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 NR4A3Q92570 626 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 ZBTB8AQ96BR9 441 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 C3orf49Q96BT1 292 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 ZNF300Q96RE9 604 aaPredicted RBP6.95□□□□□ -1.3
MSH6-211ENST00000606499 UGT2B28Q9BY64 529 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 TRIM2Q9C040 744 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 MAGIXQ9H6Y5 334 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 TMEM185BQ9H7F4 350 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 EVA1AQ9H8M9 152 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 ASF1BQ9NVP2 202 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 QPCTLQ9NXS2 382 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 NDUFAF4Q9P032 175 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 TNFRSF10DQ9UBN6 386 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 RPS6KB2Q9UBS0 482 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 RALYQ9UKM9 306 aaKnown RBP6.95□□□□□ -1.3
MSH6-211ENST00000606499 SLC7A7Q9UM01 511 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 A4GNTQ9UNA3 340 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 NPIPA1Q9UND3 350 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 TESMINQ9Y4I5 508 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 ENPP4Q9Y6X5 453 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 FREM3P0C091 2139 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 KIAA1549Q9HCM3 1950 aa6.95□□□□□ -1.3
MSH6-211ENST00000606499 TMED7-TICAM2A0A0A6YYA0 188 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 TRGV5A0A0B4J1U4 118 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 A0A0B4J2E0 115 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 A0A1B0GX12 115 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 TRAPPC13A5PLN9 417 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 TTLL8A6PVC2 850 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 H3BML4 177 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 EFNA2O43921 213 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 FKBP6O75344 327 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 PRSS23O95084 383 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 IGHG3P01860 377 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 OPN1LWP04000 364 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 PEPDP12955 493 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms