RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	PGC	P20142	388 aa		13.85	□□□□□ -0.19
PLD3-223	ENST00000600948	RPS4Y1	P22090	263 aa	Known RBP	13.85	□□□□□ -0.19
PLD3-223	ENST00000600948	CARD18	P57730	90 aa		13.85	□□□□□ -0.19
PLD3-223	ENST00000600948	SESN3	P58005	492 aa		13.85	□□□□□ -0.19
PLD3-223	ENST00000600948	KCNJ10	P78508	379 aa		13.85	□□□□□ -0.19
PLD3-223	ENST00000600948	TMEM176B	Q3YBM2	270 aa	Predicted RBP	13.85	□□□□□ -0.19
PLD3-223	ENST00000600948	C6orf10	Q5SRN2	563 aa		13.85	□□□□□ -0.19
PLD3-223	ENST00000600948	SLC2A7	Q6PXP3	512 aa		13.85	□□□□□ -0.19
PLD3-223	ENST00000600948	FUNDC1	Q8IVP5	155 aa		13.85	□□□□□ -0.19
PLD3-223	ENST00000600948	ZNF610	Q8N9Z0	462 aa		13.85	□□□□□ -0.19
PLD3-223	ENST00000600948	ATP6V1C2	Q8NEY4	427 aa		13.85	□□□□□ -0.19
PLD3-223	ENST00000600948	PAIP1	Q9H074	479 aa	Known RBP	13.85	□□□□□ -0.19
PLD3-223	ENST00000600948	TPT1P8	Q9HAU6	139 aa		13.85	□□□□□ -0.19
PLD3-223	ENST00000600948	EXOSC3	Q9NQT5	275 aa	Known RBP	13.85	□□□□□ -0.19
PLD3-223	ENST00000600948	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	13.85	□□□□□ -0.19
PLD3-223	ENST00000600948	ACER3	Q9NUN7	267 aa		13.85	□□□□□ -0.19
PLD3-223	ENST00000600948	DNAJB12	Q9NXW2	375 aa	Known RBP	13.85	□□□□□ -0.19
PLD3-223	ENST00000600948	CD79B	P40259	229 aa		13.84	□□□□□ -0.19
PLD3-223	ENST00000600948	FAM27E3	Q08E93	113 aa		13.84	□□□□□ -0.19
PLD3-223	ENST00000600948	C3orf33	Q6P1S2	294 aa		13.84	□□□□□ -0.19
PLD3-223	ENST00000600948	BLOC1S3	Q6QNY0	202 aa		13.84	□□□□□ -0.19
PLD3-223	ENST00000600948	PLEKHM3	Q6ZWE6	761 aa		13.84	□□□□□ -0.19
PLD3-223	ENST00000600948	OR6K3	Q8NGY3	331 aa		13.84	□□□□□ -0.19
PLD3-223	ENST00000600948	RNF128	Q8TEB7	428 aa		13.84	□□□□□ -0.19
PLD3-223	ENST00000600948	STON2	Q8WXE9	905 aa		13.84	□□□□□ -0.19
PLD3-223	ENST00000600948	TMEM234	Q8WY98	164 aa		13.84	□□□□□ -0.19
PLD3-223	ENST00000600948	ROBO4	Q8WZ75	1007 aa		13.84	□□□□□ -0.19
PLD3-223	ENST00000600948	CNOT9	Q92600	299 aa	Known RBP	13.84	□□□□□ -0.19
PLD3-223	ENST00000600948	PMM1	Q92871	262 aa		13.84	□□□□□ -0.19
PLD3-223	ENST00000600948	CPNE4	Q96A23	557 aa	Predicted RBP	13.84	□□□□□ -0.19
PLD3-223	ENST00000600948	DACH2	Q96NX9	599 aa		13.84	□□□□□ -0.19
PLD3-223	ENST00000600948	POLDIP3	Q9BY77	421 aa	Known RBP	13.84	□□□□□ -0.19
PLD3-223	ENST00000600948	MTHFD2L	Q9H903	347 aa	Predicted RBP	13.84	□□□□□ -0.19
PLD3-223	ENST00000600948	SLC52A3	Q9NQ40	469 aa		13.84	□□□□□ -0.19
PLD3-223	ENST00000600948	TIGAR	Q9NQ88	270 aa		13.84	□□□□□ -0.19
PLD3-223	ENST00000600948	GLRX2	Q9NS18	164 aa		13.84	□□□□□ -0.19
PLD3-223	ENST00000600948	P2RX2	Q9UBL9	471 aa		13.84	□□□□□ -0.19
PLD3-223	ENST00000600948	PROCR	Q9UNN8	238 aa		13.84	□□□□□ -0.19
PLD3-223	ENST00000600948	EMC9	Q9Y3B6	208 aa		13.84	□□□□□ -0.19
PLD3-223	ENST00000600948	PCDHB14	Q9Y5E9	798 aa		13.84	□□□□□ -0.19
PLD3-223	ENST00000600948	DSPP	Q9NZW4	1301 aa		13.84	□□□□□ -0.19
PLD3-223	ENST00000600948		A0A1W2PNR3	127 aa		13.83	□□□□□ -0.2
PLD3-223	ENST00000600948	SH3D21	A4FU49	640 aa		13.83	□□□□□ -0.2
PLD3-223	ENST00000600948	ADAM11	O75078	769 aa		13.83	□□□□□ -0.2
PLD3-223	ENST00000600948	PLG	P00747	810 aa	Predicted RBP	13.83	□□□□□ -0.2
PLD3-223	ENST00000600948	CCKAR	P32238	428 aa		13.83	□□□□□ -0.2
PLD3-223	ENST00000600948	RYK	P34925	604 aa		13.83	□□□□□ -0.2
PLD3-223	ENST00000600948	CRAT	P43155	626 aa		13.83	□□□□□ -0.2
PLD3-223	ENST00000600948	ATP4B	P51164	291 aa		13.83	□□□□□ -0.2
PLD3-223	ENST00000600948	CTBP2	P56545	445 aa		13.83	□□□□□ -0.2
PLD3-223	ENST00000600948	DSTN	P60981	165 aa		13.83	□□□□□ -0.2
PLD3-223	ENST00000600948	MERTK	Q12866	999 aa		13.83	□□□□□ -0.2
PLD3-223	ENST00000600948	CMIP	Q8IY22	773 aa		13.83	□□□□□ -0.2
PLD3-223	ENST00000600948	ARFGAP2	Q8N6H7	521 aa		13.83	□□□□□ -0.2
PLD3-223	ENST00000600948	WDR60	Q8WVS4	1066 aa		13.83	□□□□□ -0.2
PLD3-223	ENST00000600948	NRGN	Q92686	78 aa		13.83	□□□□□ -0.2
PLD3-223	ENST00000600948	CLEC4M	Q9H2X3	399 aa	Predicted RBP	13.83	□□□□□ -0.2
PLD3-223	ENST00000600948	PLSCR4	Q9NRQ2	329 aa		13.83	□□□□□ -0.2
PLD3-223	ENST00000600948	ELOVL5	Q9NYP7	299 aa		13.83	□□□□□ -0.2
PLD3-223	ENST00000600948	CCDC167	Q9P0B6	97 aa		13.83	□□□□□ -0.2
PLD3-223	ENST00000600948	PRR14L	Q5THK1	2151 aa		13.82	□□□□□ -0.2
PLD3-223	ENST00000600948		A0A096LPI6	279 aa		13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	NR5A2	O00482	541 aa		13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	EDF1	O60869	148 aa	Known RBP	13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	GOSR1	O95249	250 aa		13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	BCHE	P06276	602 aa		13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	DBI	P07108	87 aa	Known RBP	13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	TFPT	P0C1Z6	253 aa		13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	PABPC4L	P0CB38	370 aa	Known RBP	13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	POU2F1	P14859	743 aa		13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	CD1E	P15812	388 aa		13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	AGTR1	P30556	359 aa		13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	SLC7A1	P30825	629 aa		13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	RAC3	P60763	192 aa		13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	IRX1	P78414	480 aa	Predicted RBP	13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	LRIF1	Q5T3J3	769 aa		13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	MRPL2	Q5T653	305 aa	Known RBP	13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	FCRLA	Q7L513	359 aa		13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	MSRB3	Q8IXL7	192 aa		13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	ZNF563	Q8TA94	476 aa		13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	ABHD3	Q8WU67	409 aa		13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	SLC38A5	Q8WUX1	472 aa		13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	SPDL1	Q96EA4	605 aa		13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	THOC1	Q96FV9	657 aa	Known RBP	13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	OR5B2	Q96R09	309 aa		13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	SLC39A3	Q9BRY0	314 aa		13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	CCDC106	Q9BWC9	280 aa		13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	CTPS2	Q9NRF8	586 aa		13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	SERINC1	Q9NRX5	453 aa		13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	TMEM45A	Q9NWC5	275 aa		13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	ZNF446	Q9NWS9	450 aa		13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	SLC25A37	Q9NYZ2	338 aa		13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	CALML5	Q9NZT1	146 aa		13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	TESMIN	Q9Y4I5	508 aa		13.82	□□□□□ -0.2
PLD3-223	ENST00000600948	CLIC1	O00299	241 aa		13.81	□□□□□ -0.2
PLD3-223	ENST00000600948	AP3D1	O14617	1153 aa		13.81	□□□□□ -0.2
PLD3-223	ENST00000600948	BMP2	P12643	396 aa		13.81	□□□□□ -0.2
PLD3-223	ENST00000600948	IL7R	P16871	459 aa		13.81	□□□□□ -0.2
PLD3-223	ENST00000600948	DNAJA1	P31689	397 aa	Known RBP	13.81	□□□□□ -0.2
PLD3-223	ENST00000600948	UGT2B10	P36537	528 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms