RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 THUMPD3Q9BV44 507 aaKnown RBP14.54□□□□□ -0.08
LSM4-206ENST00000600289 QRSL1Q9H0R6 528 aaKnown RBP14.54□□□□□ -0.08
LSM4-206ENST00000600289 NDUFAF1Q9Y375 327 aa14.54□□□□□ -0.08
LSM4-206ENST00000600289 GJE1A6NN92 205 aa14.53□□□□□ -0.08
LSM4-206ENST00000600289 H0YC42 278 aa14.53□□□□□ -0.08
LSM4-206ENST00000600289 ANGPT2O15123 496 aa14.53□□□□□ -0.08
LSM4-206ENST00000600289 TGM6O95932 706 aa14.53□□□□□ -0.08
LSM4-206ENST00000600289 BCHEP06276 602 aa14.53□□□□□ -0.08
LSM4-206ENST00000600289 THBS1P07996 1170 aa14.53□□□□□ -0.08
LSM4-206ENST00000600289 SNRPB2P08579 225 aaKnown RBP14.53□□□□□ -0.08
LSM4-206ENST00000600289 UBTFL6P0CB48 400 aaPredicted RBP14.53□□□□□ -0.08
LSM4-206ENST00000600289 FCGR2AP12318 317 aa14.53□□□□□ -0.08
LSM4-206ENST00000600289 COX6B1P14854 86 aa14.53□□□□□ -0.08
LSM4-206ENST00000600289 GPX2P18283 190 aa14.53□□□□□ -0.08
LSM4-206ENST00000600289 ADSLP30566 484 aaPredicted RBP14.53□□□□□ -0.08
LSM4-206ENST00000600289 TPD52P55327 224 aaPredicted RBP14.53□□□□□ -0.08
LSM4-206ENST00000600289 KRTAP10-9P60411 292 aa14.53□□□□□ -0.08
LSM4-206ENST00000600289 COQ5Q5HYK3 327 aa14.53□□□□□ -0.08
LSM4-206ENST00000600289 RNF220Q5VTB9 566 aa14.53□□□□□ -0.08
LSM4-206ENST00000600289 PEX5LQ8IYB4 626 aa14.53□□□□□ -0.08
LSM4-206ENST00000600289 OR2V1Q8NHB1 315 aa14.53□□□□□ -0.08
LSM4-206ENST00000600289 SMPDL3BQ92485 455 aa14.53□□□□□ -0.08
LSM4-206ENST00000600289 ZNF524Q96C55 264 aa14.53□□□□□ -0.08
LSM4-206ENST00000600289 TMEM19Q96HH6 336 aa14.53□□□□□ -0.08
LSM4-206ENST00000600289 KLHL15Q96M94 604 aa14.53□□□□□ -0.08
LSM4-206ENST00000600289 PINK1Q9BXM7 581 aa14.53□□□□□ -0.08
LSM4-206ENST00000600289 RNF122Q9H9V4 155 aa14.53□□□□□ -0.08
LSM4-206ENST00000600289 ACER3Q9NUN7 267 aa14.53□□□□□ -0.08
LSM4-206ENST00000600289 DNAJB12Q9NXW2 375 aaKnown RBP14.53□□□□□ -0.08
LSM4-206ENST00000600289 FOXD3Q9UJU5 478 aaPredicted RBP14.53□□□□□ -0.08
LSM4-206ENST00000600289 SYT5O00445 386 aa14.52□□□□□ -0.09
LSM4-206ENST00000600289 EIF1AYO14602 144 aaKnown RBP14.52□□□□□ -0.09
LSM4-206ENST00000600289 SLC22A2O15244 555 aa14.52□□□□□ -0.09
LSM4-206ENST00000600289 EFNA2O43921 213 aa14.52□□□□□ -0.09
LSM4-206ENST00000600289 BCAS1O75363 584 aaPredicted RBP14.52□□□□□ -0.09
LSM4-206ENST00000600289 ARAFP10398 606 aa14.52□□□□□ -0.09
LSM4-206ENST00000600289 IL7RP16871 459 aa14.52□□□□□ -0.09
LSM4-206ENST00000600289 IL11P20809 199 aa14.52□□□□□ -0.09
LSM4-206ENST00000600289 BMP5P22003 454 aa14.52□□□□□ -0.09
LSM4-206ENST00000600289 PEX19P40855 299 aa14.52□□□□□ -0.09
LSM4-206ENST00000600289 CCR4P51679 360 aa14.52□□□□□ -0.09
LSM4-206ENST00000600289 GUSBP1Q15486 140 aa14.52□□□□□ -0.09
LSM4-206ENST00000600289 LIN52Q52LA3 116 aa14.52□□□□□ -0.09
LSM4-206ENST00000600289 RUNDC3AQ59EK9 446 aa14.52□□□□□ -0.09
LSM4-206ENST00000600289 PDSS1Q5T2R2 415 aa14.52□□□□□ -0.09
LSM4-206ENST00000600289 P4HA3Q7Z4N8 544 aa14.52□□□□□ -0.09
LSM4-206ENST00000600289 DHDDSQ86SQ9 333 aa14.52□□□□□ -0.09
LSM4-206ENST00000600289 RETREG3Q86VR2 466 aa14.52□□□□□ -0.09
LSM4-206ENST00000600289 ZNF295-AS1Q8N0V1 137 aa14.52□□□□□ -0.09
LSM4-206ENST00000600289 LILRA2Q8N149 483 aa14.52□□□□□ -0.09
LSM4-206ENST00000600289 OR10D3Q8NH80 312 aa14.52□□□□□ -0.09
LSM4-206ENST00000600289 BBS10Q8TAM1 723 aa14.52□□□□□ -0.09
LSM4-206ENST00000600289 FIG4Q92562 907 aa14.52□□□□□ -0.09
LSM4-206ENST00000600289 LRRC46Q96FV0 321 aa14.52□□□□□ -0.09
LSM4-206ENST00000600289 CPPED1Q9BRF8 314 aaPredicted RBP14.52□□□□□ -0.09
LSM4-206ENST00000600289 PIGMQ9H3S5 423 aa14.52□□□□□ -0.09
LSM4-206ENST00000600289 TMEM38AQ9H6F2 299 aa14.52□□□□□ -0.09
LSM4-206ENST00000600289 SLC24A3Q9HC58 644 aa14.52□□□□□ -0.09
LSM4-206ENST00000600289 A0A0J9YW62 118 aa14.51□□□□□ -0.09
LSM4-206ENST00000600289 A0A1W2PNV4 684 aa14.51□□□□□ -0.09
LSM4-206ENST00000600289 CDHR4A6H8M9 788 aa14.51□□□□□ -0.09
LSM4-206ENST00000600289 CLDN24A6NM45 220 aa14.51□□□□□ -0.09
LSM4-206ENST00000600289 CYP7B1O75881 506 aa14.51□□□□□ -0.09
LSM4-206ENST00000600289 TNFSF13O75888 250 aa14.51□□□□□ -0.09
LSM4-206ENST00000600289 NUDT7P0C024 238 aa14.51□□□□□ -0.09
LSM4-206ENST00000600289 EIF1AXP47813 144 aaKnown RBP14.51□□□□□ -0.09
LSM4-206ENST00000600289 PCYT1AP49585 367 aa14.51□□□□□ -0.09
LSM4-206ENST00000600289 SESN3P58005 492 aa14.51□□□□□ -0.09
LSM4-206ENST00000600289 FOXF2Q12947 444 aa14.51□□□□□ -0.09
LSM4-206ENST00000600289 PON3Q15166 354 aa14.51□□□□□ -0.09
LSM4-206ENST00000600289 MRPL2Q5T653 305 aaKnown RBP14.51□□□□□ -0.09
LSM4-206ENST00000600289 C3orf33Q6P1S2 294 aa14.51□□□□□ -0.09
LSM4-206ENST00000600289 PLEKHM3Q6ZWE6 761 aa14.51□□□□□ -0.09
LSM4-206ENST00000600289 DMRTC2Q8IXT2 367 aaPredicted RBP14.51□□□□□ -0.09
LSM4-206ENST00000600289 ZNF440Q8IYI8 595 aa14.51□□□□□ -0.09
LSM4-206ENST00000600289 C10orf111Q8N326 155 aa14.51□□□□□ -0.09
LSM4-206ENST00000600289 OR52P1PQ8NH57 321 aa14.51□□□□□ -0.09
LSM4-206ENST00000600289 FNDC9Q8TBE3 224 aa14.51□□□□□ -0.09
LSM4-206ENST00000600289 SLC25A43Q8WUT9 341 aaPredicted RBP14.51□□□□□ -0.09
LSM4-206ENST00000600289 C10orf82Q8WW14 230 aa14.51□□□□□ -0.09
LSM4-206ENST00000600289 CNOT9Q92600 299 aaKnown RBP14.51□□□□□ -0.09
LSM4-206ENST00000600289 RNASE6Q93091 150 aaKnown RBP14.51□□□□□ -0.09
LSM4-206ENST00000600289 SLC35B4Q969S0 331 aa14.51□□□□□ -0.09
LSM4-206ENST00000600289 ZNF845Q96IR2 970 aaPredicted RBP14.51□□□□□ -0.09
LSM4-206ENST00000600289 ANKRD27Q96NW4 1050 aa14.51□□□□□ -0.09
LSM4-206ENST00000600289 IKZF5Q9H5V7 419 aa14.51□□□□□ -0.09
LSM4-206ENST00000600289 SAR1AQ9NR31 198 aa14.51□□□□□ -0.09
LSM4-206ENST00000600289 IFT52Q9Y366 437 aa14.51□□□□□ -0.09
LSM4-206ENST00000600289 BBIP1A8MTZ0 92 aa14.5□□□□□ -0.09
LSM4-206ENST00000600289 EVPLLA8MZ36 301 aa14.5□□□□□ -0.09
LSM4-206ENST00000600289 ADAM11O75078 769 aa14.5□□□□□ -0.09
LSM4-206ENST00000600289 ETS2P15036 469 aa14.5□□□□□ -0.09
LSM4-206ENST00000600289 FKBP2P26885 142 aaKnown RBP14.5□□□□□ -0.09
LSM4-206ENST00000600289 APOBEC1P41238 236 aaKnown RBP14.5□□□□□ -0.09
LSM4-206ENST00000600289 KLF10Q13118 480 aa14.5□□□□□ -0.09
LSM4-206ENST00000600289 LARS2Q15031 903 aaKnown RBP14.5□□□□□ -0.09
LSM4-206ENST00000600289 MAPRE2Q15555 327 aa14.5□□□□□ -0.09
LSM4-206ENST00000600289 SGCBQ16585 318 aa14.5□□□□□ -0.09
LSM4-206ENST00000600289 GCNT6Q5T4J0 391 aa14.5□□□□□ -0.09
LSM4-206ENST00000600289 HBMQ6B0K9 141 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms