RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 LSM14AQ8ND56 463 aaKnown RBP13.72□□□□□ -0.21
SYMPK-213ENST00000599460 ELP5Q8TE02 316 aa13.72□□□□□ -0.21
SYMPK-213ENST00000599460 KCND3Q9UK17 655 aa13.72□□□□□ -0.21
SYMPK-213ENST00000599460 NEU3Q9UQ49 428 aa13.72□□□□□ -0.21
SYMPK-213ENST00000599460 FTCDNL1E5RQL4 147 aa13.71□□□□□ -0.21
SYMPK-213ENST00000599460 LMO7DNF2Z398 122 aa13.71□□□□□ -0.21
SYMPK-213ENST00000599460 F10P00742 488 aa13.71□□□□□ -0.21
SYMPK-213ENST00000599460 CSNK1A1P48729 337 aa13.71□□□□□ -0.21
SYMPK-213ENST00000599460 POU3F1Q03052 451 aaPredicted RBP13.71□□□□□ -0.21
SYMPK-213ENST00000599460 HLA-BQ31612 363 aa13.71□□□□□ -0.21
SYMPK-213ENST00000599460 B3GNT8Q7Z7M8 397 aa13.71□□□□□ -0.21
SYMPK-213ENST00000599460 CA13Q8N1Q1 262 aa13.71□□□□□ -0.21
SYMPK-213ENST00000599460 DTX3Q8N9I9 347 aa13.71□□□□□ -0.21
SYMPK-213ENST00000599460 HOXB13Q92826 284 aaPredicted RBP13.71□□□□□ -0.21
SYMPK-213ENST00000599460 PLAC1Q9HBJ0 212 aa13.71□□□□□ -0.21
SYMPK-213ENST00000599460 ZNF639Q9UID6 485 aa13.71□□□□□ -0.21
SYMPK-213ENST00000599460 TRIP11Q15643 1979 aa13.71□□□□□ -0.21
SYMPK-213ENST00000599460 TVP23AA6NH52 213 aa13.71□□□□□ -0.21
SYMPK-213ENST00000599460 ERCC1P07992 297 aaPredicted RBP13.71□□□□□ -0.21
SYMPK-213ENST00000599460 RAB40BQ12829 278 aa13.71□□□□□ -0.21
SYMPK-213ENST00000599460 ELAVL1Q15717 326 aaKnown RBP13.71□□□□□ -0.21
SYMPK-213ENST00000599460 SMAD2Q15796 467 aaKnown RBP13.71□□□□□ -0.21
SYMPK-213ENST00000599460 DUSP5Q16690 384 aa13.71□□□□□ -0.21
SYMPK-213ENST00000599460 TMEM176BQ3YBM2 270 aaPredicted RBP13.71□□□□□ -0.21
SYMPK-213ENST00000599460 TMEM201Q5SNT2 666 aa13.71□□□□□ -0.21
SYMPK-213ENST00000599460 PAQR7Q86WK9 346 aa13.71□□□□□ -0.21
SYMPK-213ENST00000599460 OR5W2Q8NH69 310 aa13.71□□□□□ -0.21
SYMPK-213ENST00000599460 STACQ99469 402 aa13.71□□□□□ -0.21
SYMPK-213ENST00000599460 PCED1AQ9H1Q7 454 aa13.71□□□□□ -0.21
SYMPK-213ENST00000599460 SPNS1Q9H2V7 528 aa13.71□□□□□ -0.21
SYMPK-213ENST00000599460 ACOT13Q9NPJ3 140 aa13.71□□□□□ -0.21
SYMPK-213ENST00000599460 SLC16A7O60669 478 aa13.71□□□□□ -0.21
SYMPK-213ENST00000599460 OCLNQ16625 522 aa13.71□□□□□ -0.21
SYMPK-213ENST00000599460 VWA2Q5GFL6 755 aa13.71□□□□□ -0.21
SYMPK-213ENST00000599460 UGT2A3Q6UWM9 527 aa13.71□□□□□ -0.21
SYMPK-213ENST00000599460 C6orf15Q6UXA7 325 aaPredicted RBP13.71□□□□□ -0.21
SYMPK-213ENST00000599460 MBOAT2Q6ZWT7 520 aa13.71□□□□□ -0.21
SYMPK-213ENST00000599460 OR8S1Q8NH09 359 aa13.71□□□□□ -0.21
SYMPK-213ENST00000599460 NANOS1Q8WY41 292 aaKnown RBP13.71□□□□□ -0.21
SYMPK-213ENST00000599460 AMBRA1Q9C0C7 1298 aa13.71□□□□□ -0.21
SYMPK-213ENST00000599460 SLC22A7Q9Y694 548 aa13.71□□□□□ -0.21
SYMPK-213ENST00000599460 SYT5O00445 386 aa13.71□□□□□ -0.22
SYMPK-213ENST00000599460 TRHRP34981 398 aaPredicted RBP13.71□□□□□ -0.22
SYMPK-213ENST00000599460 PRKXP51817 358 aa13.71□□□□□ -0.22
SYMPK-213ENST00000599460 RRADP55042 308 aa13.71□□□□□ -0.22
SYMPK-213ENST00000599460 ZNF45Q02386 682 aa13.71□□□□□ -0.22
SYMPK-213ENST00000599460 C17orf67Q0P5P2 114 aa13.71□□□□□ -0.22
SYMPK-213ENST00000599460 LINC00696Q6ZRV3 163 aa13.71□□□□□ -0.22
SYMPK-213ENST00000599460 MARCH3Q86UD3 253 aa13.71□□□□□ -0.22
SYMPK-213ENST00000599460 TMEM102Q8N9M5 508 aaPredicted RBP13.71□□□□□ -0.22
SYMPK-213ENST00000599460 DRAXINQ8NBI3 349 aaPredicted RBP13.71□□□□□ -0.22
SYMPK-213ENST00000599460 SPRYD4Q8WW59 207 aaPredicted RBP13.71□□□□□ -0.22
SYMPK-213ENST00000599460 FCAMRQ8WWV6 532 aa13.71□□□□□ -0.22
SYMPK-213ENST00000599460 INTS14Q96SY0 518 aa13.71□□□□□ -0.22
SYMPK-213ENST00000599460 NUDT22Q9BRQ3 303 aa13.71□□□□□ -0.22
SYMPK-213ENST00000599460 POU2F3Q9UKI9 436 aa13.71□□□□□ -0.22
SYMPK-213ENST00000599460 GIPRP48546 466 aa13.7□□□□□ -0.22
SYMPK-213ENST00000599460 MEPCEQ7L2J0 689 aaKnown RBP13.7□□□□□ -0.22
SYMPK-213ENST00000599460 SPRED1Q7Z699 444 aa13.7□□□□□ -0.22
SYMPK-213ENST00000599460 SMRP1Q8NCR6 262 aa13.7□□□□□ -0.22
SYMPK-213ENST00000599460 OR6T1Q8NGN1 323 aa13.7□□□□□ -0.22
SYMPK-213ENST00000599460 FER1L6-AS2Q96M78 137 aa13.7□□□□□ -0.22
SYMPK-213ENST00000599460 FOXN4Q96NZ1 517 aa13.7□□□□□ -0.22
SYMPK-213ENST00000599460 C19orf53Q9UNZ5 99 aaPredicted RBP13.7□□□□□ -0.22
SYMPK-213ENST00000599460 MRPS14O60783 128 aaKnown RBP13.7□□□□□ -0.22
SYMPK-213ENST00000599460 TIGD4Q8IY51 512 aa13.7□□□□□ -0.22
SYMPK-213ENST00000599460 SLC2A12Q8TD20 617 aa13.7□□□□□ -0.22
SYMPK-213ENST00000599460 SCGB3A2Q96PL1 93 aa13.7□□□□□ -0.22
SYMPK-213ENST00000599460 POMT2Q9UKY4 750 aa13.7□□□□□ -0.22
SYMPK-213ENST00000599460 GMEB1Q9Y692 573 aa13.7□□□□□ -0.22
SYMPK-213ENST00000599460 GGT3PA6NGU5 568 aa13.7□□□□□ -0.22
SYMPK-213ENST00000599460 SOX3P41225 446 aa13.7□□□□□ -0.22
SYMPK-213ENST00000599460 FTMTQ8N4E7 242 aa13.7□□□□□ -0.22
SYMPK-213ENST00000599460 CHDHQ8NE62 594 aaPredicted RBP13.7□□□□□ -0.22
SYMPK-213ENST00000599460 SPTSSAQ969W0 71 aa13.7□□□□□ -0.22
SYMPK-213ENST00000599460 TMIGD2Q96BF3 282 aa13.7□□□□□ -0.22
SYMPK-213ENST00000599460 PRR14Q9BWN1 585 aa13.7□□□□□ -0.22
SYMPK-213ENST00000599460 CASP8AP2Q9UKL3 1982 aa13.7□□□□□ -0.22
SYMPK-213ENST00000599460 DOCK3Q8IZD9 2030 aa13.7□□□□□ -0.22
SYMPK-213ENST00000599460 A0A1B0GWA3 101 aa13.7□□□□□ -0.22
SYMPK-213ENST00000599460 TMEM69Q5SWH9 247 aa13.7□□□□□ -0.22
SYMPK-213ENST00000599460 UNQ6126/PRO20091Q6UXV3 157 aa13.7□□□□□ -0.22
SYMPK-213ENST00000599460 CCDC54Q8NEL0 328 aa13.7□□□□□ -0.22
SYMPK-213ENST00000599460 TMEM255BQ8WV15 326 aa13.7□□□□□ -0.22
SYMPK-213ENST00000599460 HAVCR1Q96D42 359 aa13.7□□□□□ -0.22
SYMPK-213ENST00000599460 ZNF69Q9UC07 566 aa13.7□□□□□ -0.22
SYMPK-213ENST00000599460 CAMK2AQ9UQM7 478 aa13.7□□□□□ -0.22
SYMPK-213ENST00000599460 C5orf51A6NDU8 294 aa13.69□□□□□ -0.22
SYMPK-213ENST00000599460 CENPBD1B2RD01 187 aa13.69□□□□□ -0.22
SYMPK-213ENST00000599460 HMGN4O00479 90 aa13.69□□□□□ -0.22
SYMPK-213ENST00000599460 SYT7O43581 403 aa13.69□□□□□ -0.22
SYMPK-213ENST00000599460 RAD1O60671 282 aa13.69□□□□□ -0.22
SYMPK-213ENST00000599460 CDK1P06493 297 aa13.69□□□□□ -0.22
SYMPK-213ENST00000599460 S100A9P06702 114 aaKnown RBP13.69□□□□□ -0.22
SYMPK-213ENST00000599460 NME1P15531 152 aaKnown RBP13.69□□□□□ -0.22
SYMPK-213ENST00000599460 ELAVL4P26378 380 aaKnown RBP13.69□□□□□ -0.22
SYMPK-213ENST00000599460 SF3B4Q15427 424 aaKnown RBP eCLIP13.69□□□□□ -0.221e-6■■■■□ 25.1
SYMPK-213ENST00000599460 SPIN3Q5JUX0 258 aa13.69□□□□□ -0.22
SYMPK-213ENST00000599460 GDF7Q7Z4P5 450 aa13.69□□□□□ -0.22
SYMPK-213ENST00000599460 DMRTB1Q96MA1 342 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms