RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 CLNS1AP54105 237 aaKnown RBP8.71□□□□□ -1.02
VRK3-216ENST00000599342 CASP9P55211 416 aa8.71□□□□□ -1.02
VRK3-216ENST00000599342 CSNK2A1P68400 391 aaPredicted RBP8.71□□□□□ -1.02
VRK3-216ENST00000599342 ZNF844Q08AG5 666 aa8.71□□□□□ -1.02
VRK3-216ENST00000599342 RASGEF1BQ0VAM2 473 aa8.71□□□□□ -1.02
VRK3-216ENST00000599342 MERTKQ12866 999 aa8.71□□□□□ -1.02
VRK3-216ENST00000599342 ITGADQ13349 1161 aa8.71□□□□□ -1.02
VRK3-216ENST00000599342 P2RY6Q15077 328 aa8.71□□□□□ -1.02
VRK3-216ENST00000599342 TSC22D1Q15714 1073 aa8.71□□□□□ -1.02
VRK3-216ENST00000599342 TNFAIP8L2Q6P589 184 aaPredicted RBP8.71□□□□□ -1.02
VRK3-216ENST00000599342 ANKRD46Q86W74 232 aa8.71□□□□□ -1.02
VRK3-216ENST00000599342 ZNF619Q8N2I2 560 aa8.71□□□□□ -1.02
VRK3-216ENST00000599342 CIARTQ8N365 385 aaPredicted RBP8.71□□□□□ -1.02
VRK3-216ENST00000599342 ZNF611Q8N823 705 aa8.71□□□□□ -1.02
VRK3-216ENST00000599342 ZNF563Q8TA94 476 aa8.71□□□□□ -1.02
VRK3-216ENST00000599342 MIPOL1Q8TD10 442 aa8.71□□□□□ -1.02
VRK3-216ENST00000599342 SLC25A43Q8WUT9 341 aaPredicted RBP8.71□□□□□ -1.02
VRK3-216ENST00000599342 XAGE5Q8WWM1 108 aa8.71□□□□□ -1.02
VRK3-216ENST00000599342 OIT3Q8WWZ8 545 aa8.71□□□□□ -1.02
VRK3-216ENST00000599342 HSD17B8Q92506 261 aa8.71□□□□□ -1.02
VRK3-216ENST00000599342 TESCQ96BS2 214 aa8.71□□□□□ -1.02
VRK3-216ENST00000599342 PSD2Q9BQI7 771 aa8.71□□□□□ -1.02
VRK3-216ENST00000599342 TMEM204Q9BSN7 226 aa8.71□□□□□ -1.02
VRK3-216ENST00000599342 POTEKPQ9BYX7 375 aa8.71□□□□□ -1.02
VRK3-216ENST00000599342 NUF2Q9BZD4 464 aa8.71□□□□□ -1.02
VRK3-216ENST00000599342 QRSL1Q9H0R6 528 aaKnown RBP8.71□□□□□ -1.02
VRK3-216ENST00000599342 BCO1Q9HAY6 547 aa8.71□□□□□ -1.02
VRK3-216ENST00000599342 POLE3Q9NRF9 147 aa8.71□□□□□ -1.02
VRK3-216ENST00000599342 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.71□□□□□ -1.02
VRK3-216ENST00000599342 SLC35A3Q9Y2D2 325 aa8.71□□□□□ -1.02
VRK3-216ENST00000599342 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.71□□□□□ -1.02
VRK3-216ENST00000599342 WDR45Q9Y484 360 aa8.71□□□□□ -1.02
VRK3-216ENST00000599342 RNF115Q9Y4L5 304 aa8.71□□□□□ -1.02
VRK3-216ENST00000599342 V9GYY5 206 aaPredicted RBP8.71□□□□□ -1.02
VRK3-216ENST00000599342 CENPVL1A0A0U1RR11 272 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 TRIM64A6NGJ6 449 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 TRIM64BA6NI03 449 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 ESPNB1AK53 854 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 E9PBE3 544 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 SULT2B1O00204 365 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 ETV2O00321 342 aaPredicted RBP8.7□□□□□ -1.02
VRK3-216ENST00000599342 ANKRD28O15084 1053 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 SMAD9O15198 467 aaKnown RBP8.7□□□□□ -1.02
VRK3-216ENST00000599342 CYTIPO60759 359 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 H6PDO95479 791 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 CNOT4O95628 575 aaKnown RBP8.7□□□□□ -1.02
VRK3-216ENST00000599342 LY6G6DO95868 133 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 CD3EP07766 207 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 TFPIP10646 304 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 LBPP18428 481 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 BGNP21810 368 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 S100A3P33764 101 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 APOBEC1P41238 236 aaKnown RBP8.7□□□□□ -1.02
VRK3-216ENST00000599342 OR3A2P47893 321 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 DIO1P49895 249 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 ATP5J2P56134 94 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 SESN3P58005 492 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 RPS4XP62701 263 aaKnown RBP8.7□□□□□ -1.02
VRK3-216ENST00000599342 STX3Q13277 289 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 TAB1Q15750 504 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 STK11Q15831 433 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 GPAT3Q53EU6 434 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 SYT14P1Q58G82 188 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 SPANXN4Q5MJ08 99 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 SAXO2Q658L1 398 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 HEPHL1Q6MZM0 1159 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 Q6ZT83 130 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 BHLHA15Q7RTS1 189 aaPredicted RBP8.7□□□□□ -1.02
VRK3-216ENST00000599342 OLIG3Q7RTU3 272 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 ZNF100Q8IYN0 542 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 LRRC34Q8IZ02 419 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 TRIML2Q8N7C3 387 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 RAB3IL1Q8TBN0 382 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 RAB8BQ92930 207 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 FBXW5Q969U6 566 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 ROPN1LQ96C74 230 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 ZHX1-C8orf76Q96EF9 292 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 PAIP2Q9BPZ3 127 aaKnown RBP8.7□□□□□ -1.02
VRK3-216ENST00000599342 SLC35A5Q9BS91 424 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 C20orf27Q9GZN8 174 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 KCNK9Q9NPC2 374 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 EMC3Q9P0I2 261 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 MARCOQ9UEW3 520 aaPredicted RBP8.7□□□□□ -1.02
VRK3-216ENST00000599342 KCNE5Q9UJ90 142 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 LAMP3Q9UQV4 416 aa8.7□□□□□ -1.02
VRK3-216ENST00000599342 RAI1Q7Z5J4 1906 aaPredicted RBP8.7□□□□□ -1.02
VRK3-216ENST00000599342 VPS13CQ709C8 3753 aa8.69□□□□□ -1.02
VRK3-216ENST00000599342 ZNF724A8MTY0 619 aa8.69□□□□□ -1.02
VRK3-216ENST00000599342 ZNF814B7Z6K7 855 aa8.69□□□□□ -1.02
VRK3-216ENST00000599342 DNAJA2O60884 412 aa8.69□□□□□ -1.02
VRK3-216ENST00000599342 LYZL6O75951 148 aa8.69□□□□□ -1.02
VRK3-216ENST00000599342 FESP07332 822 aa8.69□□□□□ -1.02
VRK3-216ENST00000599342 GUSBP08236 651 aa8.69□□□□□ -1.02
VRK3-216ENST00000599342 DHRS4L1P0CG22 281 aa8.69□□□□□ -1.02
VRK3-216ENST00000599342 PAX1P15863 534 aa8.69□□□□□ -1.02
VRK3-216ENST00000599342 RYKP34925 604 aa8.69□□□□□ -1.02
VRK3-216ENST00000599342 PGM1P36871 562 aa8.69□□□□□ -1.02
VRK3-216ENST00000599342 ANXA11P50995 505 aaKnown RBP8.69□□□□□ -1.02
VRK3-216ENST00000599342 PPP2R2BQ00005 443 aa8.69□□□□□ -1.02
VRK3-216ENST00000599342 CASP8Q14790 479 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms