RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 A4GALTQ9NPC4 353 aa15.02■□□□□ -0
SSBP4-204ENST00000597724 A0A1W2PNV4 684 aa15.01□□□□□ -0.01
SSBP4-204ENST00000597724 TNFSF11O14788 317 aa15.01□□□□□ -0.01
SSBP4-204ENST00000597724 ANGPT2O15123 496 aa15.01□□□□□ -0.01
SSBP4-204ENST00000597724 CXCL13O43927 109 aa15.01□□□□□ -0.01
SSBP4-204ENST00000597724 ADAM11O75078 769 aa15.01□□□□□ -0.01
SSBP4-204ENST00000597724 TNFSF13O75888 250 aa15.01□□□□□ -0.01
SSBP4-204ENST00000597724 GPX2P18283 190 aa15.01□□□□□ -0.01
SSBP4-204ENST00000597724 RYKP34925 604 aa15.01□□□□□ -0.01
SSBP4-204ENST00000597724 RUNDC3AQ59EK9 446 aa15.01□□□□□ -0.01
SSBP4-204ENST00000597724 RPS26P11Q5JNZ5 115 aaPredicted RBP15.01□□□□□ -0.01
SSBP4-204ENST00000597724 PDSS1Q5T2R2 415 aa15.01□□□□□ -0.01
SSBP4-204ENST00000597724 PRAMEF8Q5VWM4 474 aa15.01□□□□□ -0.01
SSBP4-204ENST00000597724 PRAMEF7Q5VXH5 474 aa15.01□□□□□ -0.01
SSBP4-204ENST00000597724 HBMQ6B0K9 141 aa15.01□□□□□ -0.01
SSBP4-204ENST00000597724 RETREG3Q86VR2 466 aa15.01□□□□□ -0.01
SSBP4-204ENST00000597724 ZNF295-AS1Q8N0V1 137 aa15.01□□□□□ -0.01
SSBP4-204ENST00000597724 C10orf111Q8N326 155 aa15.01□□□□□ -0.01
SSBP4-204ENST00000597724 OR52P1PQ8NH57 321 aa15.01□□□□□ -0.01
SSBP4-204ENST00000597724 TMEM234Q8WY98 164 aa15.01□□□□□ -0.01
SSBP4-204ENST00000597724 OSTF1Q92882 214 aa15.01□□□□□ -0.01
SSBP4-204ENST00000597724 TRIM8Q9BZR9 551 aa15.01□□□□□ -0.01
SSBP4-204ENST00000597724 IKZF5Q9H5V7 419 aa15.01□□□□□ -0.01
SSBP4-204ENST00000597724 BCL2L10Q9HD36 194 aa15.01□□□□□ -0.01
SSBP4-204ENST00000597724 ACER3Q9NUN7 267 aa15.01□□□□□ -0.01
SSBP4-204ENST00000597724 MRGBPQ9NV56 204 aa15.01□□□□□ -0.01
SSBP4-204ENST00000597724 DNAJB12Q9NXW2 375 aaKnown RBP15.01□□□□□ -0.01
SSBP4-204ENST00000597724 GJE1A6NN92 205 aa15□□□□□ -0.01
SSBP4-204ENST00000597724 EVPLLA8MZ36 301 aa15□□□□□ -0.01
SSBP4-204ENST00000597724 AQP8O94778 261 aa15□□□□□ -0.01
SSBP4-204ENST00000597724 FCGR2AP12318 317 aa15□□□□□ -0.01
SSBP4-204ENST00000597724 SLC6A8P48029 635 aa15□□□□□ -0.01
SSBP4-204ENST00000597724 CARD18P57730 90 aa15□□□□□ -0.01
SSBP4-204ENST00000597724 SELENBP1Q13228 472 aa15□□□□□ -0.01
SSBP4-204ENST00000597724 TMEM176BQ3YBM2 270 aaPredicted RBP15□□□□□ -0.01
SSBP4-204ENST00000597724 MRPL2Q5T653 305 aaKnown RBP15□□□□□ -0.01
SSBP4-204ENST00000597724 PLEKHM3Q6ZWE6 761 aa15□□□□□ -0.01
SSBP4-204ENST00000597724 VRK2Q86Y07 508 aa15□□□□□ -0.01
SSBP4-204ENST00000597724 ZNF563Q8TA94 476 aa15□□□□□ -0.01
SSBP4-204ENST00000597724 RNASE6Q93091 150 aaKnown RBP15□□□□□ -0.01
SSBP4-204ENST00000597724 LRRC46Q96FV0 321 aa15□□□□□ -0.01
SSBP4-204ENST00000597724 PRRG4Q9BZD6 226 aa15□□□□□ -0.01
SSBP4-204ENST00000597724 PIGMQ9H3S5 423 aa15□□□□□ -0.01
SSBP4-204ENST00000597724 SAR1AQ9NR31 198 aa15□□□□□ -0.01
SSBP4-204ENST00000597724 KLHL14Q9P2G3 628 aa15□□□□□ -0.01
SSBP4-204ENST00000597724 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15□□□□□ -0.01
SSBP4-204ENST00000597724 FOXD3Q9UJU5 478 aaPredicted RBP15□□□□□ -0.01
SSBP4-204ENST00000597724 MCTS1Q9ULC4 181 aaKnown RBP15□□□□□ -0.01
SSBP4-204ENST00000597724 CORO2BQ9UQ03 480 aa15□□□□□ -0.01
SSBP4-204ENST00000597724 CDHR4A6H8M9 788 aa14.99□□□□□ -0.01
SSBP4-204ENST00000597724 EEF1E1-BLOC1S5C9J1V9 151 aa14.99□□□□□ -0.01
SSBP4-204ENST00000597724 AP3D1O14617 1153 aa14.99□□□□□ -0.01
SSBP4-204ENST00000597724 EEF1E1O43324 174 aaKnown RBP14.99□□□□□ -0.01
SSBP4-204ENST00000597724 PGM3O95394 542 aa14.99□□□□□ -0.01
SSBP4-204ENST00000597724 SYNGR4O95473 234 aa14.99□□□□□ -0.01
SSBP4-204ENST00000597724 THBS1P07996 1170 aa14.99□□□□□ -0.01
SSBP4-204ENST00000597724 ARAFP10398 606 aa14.99□□□□□ -0.01
SSBP4-204ENST00000597724 UQCRC1P31930 480 aa14.99□□□□□ -0.01
SSBP4-204ENST00000597724 APOBEC1P41238 236 aaKnown RBP14.99□□□□□ -0.01
SSBP4-204ENST00000597724 KIR2DL2P43627 348 aaPredicted RBP14.99□□□□□ -0.01
SSBP4-204ENST00000597724 MERTKQ12866 999 aa14.99□□□□□ -0.01
SSBP4-204ENST00000597724 GUSBP1Q15486 140 aa14.99□□□□□ -0.01
SSBP4-204ENST00000597724 ZSWIM7Q19AV6 140 aa14.99□□□□□ -0.01
SSBP4-204ENST00000597724 LIN52Q52LA3 116 aa14.99□□□□□ -0.01
SSBP4-204ENST00000597724 C3orf33Q6P1S2 294 aa14.99□□□□□ -0.01
SSBP4-204ENST00000597724 ZNF836Q6ZNA1 936 aa14.99□□□□□ -0.01
SSBP4-204ENST00000597724 DHDDSQ86SQ9 333 aa14.99□□□□□ -0.01
SSBP4-204ENST00000597724 ATP6V1C2Q8NEY4 427 aa14.99□□□□□ -0.01
SSBP4-204ENST00000597724 BBS10Q8TAM1 723 aa14.99□□□□□ -0.01
SSBP4-204ENST00000597724 STARD4Q96DR4 205 aa14.99□□□□□ -0.01
SSBP4-204ENST00000597724 ANKRD27Q96NW4 1050 aa14.99□□□□□ -0.01
SSBP4-204ENST00000597724 CGREF1Q99674 301 aa14.99□□□□□ -0.01
SSBP4-204ENST00000597724 CPPED1Q9BRF8 314 aaPredicted RBP14.99□□□□□ -0.01
SSBP4-204ENST00000597724 CCDC106Q9BWC9 280 aa14.99□□□□□ -0.01
SSBP4-204ENST00000597724 TMEM38AQ9H6F2 299 aa14.99□□□□□ -0.01
SSBP4-204ENST00000597724 SERINC1Q9NRX5 453 aa14.99□□□□□ -0.01
SSBP4-204ENST00000597724 RLIMQ9NVW2 624 aa14.99□□□□□ -0.01
SSBP4-204ENST00000597724 PACSIN3Q9UKS6 424 aa14.99□□□□□ -0.01
SSBP4-204ENST00000597724 ZNF232Q9UNY5 417 aa14.99□□□□□ -0.01
SSBP4-204ENST00000597724 ZNF443Q9Y2A4 671 aaPredicted RBP14.99□□□□□ -0.01
SSBP4-204ENST00000597724 IFT52Q9Y366 437 aa14.99□□□□□ -0.01
SSBP4-204ENST00000597724 ANKHD1Q8IWZ3 2542 aaKnown RBP14.99□□□□□ -0.01
SSBP4-204ENST00000597724 A8MXE2 369 aa14.98□□□□□ -0.01
SSBP4-204ENST00000597724 C5orf58C9J3I9 102 aa14.98□□□□□ -0.01
SSBP4-204ENST00000597724 FAAHO00519 579 aa14.98□□□□□ -0.01
SSBP4-204ENST00000597724 FBP2O00757 339 aa14.98□□□□□ -0.01
SSBP4-204ENST00000597724 IDH2P48735 452 aaKnown RBP14.98□□□□□ -0.01
SSBP4-204ENST00000597724 EPS8Q12929 822 aa14.98□□□□□ -0.01
SSBP4-204ENST00000597724 KLF10Q13118 480 aa14.98□□□□□ -0.01
SSBP4-204ENST00000597724 LARS2Q15031 903 aaKnown RBP14.98□□□□□ -0.01
SSBP4-204ENST00000597724 ADRM1Q16186 407 aa14.98□□□□□ -0.01
SSBP4-204ENST00000597724 GCNT6Q5T4J0 391 aa14.98□□□□□ -0.01
SSBP4-204ENST00000597724 RNF220Q5VTB9 566 aa14.98□□□□□ -0.01
SSBP4-204ENST00000597724 PPP4R4Q6NUP7 873 aa14.98□□□□□ -0.01
SSBP4-204ENST00000597724 VWA1Q6PCB0 445 aa14.98□□□□□ -0.01
SSBP4-204ENST00000597724 GDF7Q7Z4P5 450 aa14.98□□□□□ -0.01
SSBP4-204ENST00000597724 LUZP2Q86TE4 346 aa14.98□□□□□ -0.01
SSBP4-204ENST00000597724 ZNF440Q8IYI8 595 aa14.98□□□□□ -0.01
SSBP4-204ENST00000597724 CLIP4Q8N3C7 705 aa14.98□□□□□ -0.01
SSBP4-204ENST00000597724 CNEP1R1Q8N9A8 125 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms