RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 HS3ST5Q8IZT8 346 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 TMEM251Q8N6I4 163 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 NFAM1Q8NET5 270 aaPredicted RBP11.67□□□□□ -0.54
SCAF1-202ENST00000595242 OR5T3Q8NGG3 340 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 ADAMTS16Q8TE57 1224 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 SLC38A5Q8WUX1 472 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 TMEM19Q96HH6 336 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 BBS4Q96RK4 519 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 AMBRA1Q9C0C7 1298 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 TOR3AQ9H497 397 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 LDAHQ9H6V9 325 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 REEP1Q9H902 201 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 SMURF2Q9HAU4 748 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 BCL2L10Q9HD36 194 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 FAM118AQ9NWS6 357 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 FBXW2Q9UKT8 454 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 SNX8Q9Y5X2 465 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 SLC22A7Q9Y694 548 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 TRBV11-1A0A0K0K1C0 115 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 PRAMEF25A6NGN4 478 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 ZNF860A6NHJ4 632 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 G3V3Y1 287 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 CLDN4O14493 209 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 EMC8O43402 210 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 B3GALT2O43825 422 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 DNAJB6O75190 326 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 PRKRAO75569 313 aaKnown RBP11.66□□□□□ -0.54
SCAF1-202ENST00000595242 PGM3O95394 542 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 BCHEP06276 602 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 FHP07954 510 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 ALOX12P18054 663 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 AQP1P29972 269 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 MPIP34949 423 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 ALDH3B2P48448 385 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 SSR4P51571 173 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 NR1H2P55055 460 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 DUSP2Q05923 314 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 RNF220Q5VTB9 566 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 FAM180BQ6P0A1 224 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 TNFAIP8L2Q6P589 184 aaPredicted RBP11.66□□□□□ -0.54
SCAF1-202ENST00000595242 APCDD1LQ8NCL9 501 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 TSPAN14Q8NG11 270 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 OR4C15Q8NGM1 316 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 FBLIM1Q8WUP2 373 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 RASSF5Q8WWW0 418 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 PERPQ96FX8 193 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 TPD52L3Q96J77 140 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 PTCHD1Q96NR3 888 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 ZNF300Q96RE9 604 aaPredicted RBP11.66□□□□□ -0.54
SCAF1-202ENST00000595242 NPLQ9BXD5 320 aaPredicted RBP11.66□□□□□ -0.54
SCAF1-202ENST00000595242 OR51I1Q9H343 314 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 EXO5Q9H790 373 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 ZCCHC3Q9NUD5 404 aaKnown RBP11.66□□□□□ -0.54
SCAF1-202ENST00000595242 NDUFAF4Q9P032 175 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 P2RX2Q9UBL9 471 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 ZNF629Q9UEG4 869 aaPredicted RBP11.66□□□□□ -0.54
SCAF1-202ENST00000595242 PSME2Q9UL46 239 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 DAPP1Q9UN19 280 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 SAMHD1Q9Y3Z3 626 aaKnown RBP11.66□□□□□ -0.54
SCAF1-202ENST00000595242 PCDHGB3Q9Y5G1 929 aa11.66□□□□□ -0.54
SCAF1-202ENST00000595242 RAI1Q7Z5J4 1906 aaPredicted RBP11.66□□□□□ -0.54
SCAF1-202ENST00000595242 ARRDC5A6NEK1 342 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 A8MUA0 341 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 C5orf58C9J3I9 102 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 WIPF1O43516 503 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 ERAL1O75616 437 aaKnown RBP11.65□□□□□ -0.54
SCAF1-202ENST00000595242 SLITRK5O94991 958 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 MFN2O95140 757 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 CNOT4O95628 575 aaKnown RBP11.65□□□□□ -0.54
SCAF1-202ENST00000595242 OPN1SWP03999 348 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 IGFBP5P24593 272 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 RYKP34925 604 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 GPC1P35052 558 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 LIMS1P48059 325 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 HMGA2P52926 109 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 CASP9P55211 416 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 LIM2P55344 173 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 BTG2P78543 158 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 SORDQ00796 357 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 TP53BP2Q13625 1128 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 RUNX2Q13950 521 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 SLC10A1Q14973 349 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 TTC33Q6PID6 262 aaPredicted RBP11.65□□□□□ -0.54
SCAF1-202ENST00000595242 POMZP3Q6PJE2 187 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 IL20RBQ6UXL0 311 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 THAP5Q7Z6K1 395 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 CYP4Z1Q86W10 505 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 C8orf59Q8N0T1 100 aaPredicted RBP11.65□□□□□ -0.54
SCAF1-202ENST00000595242 PIK3C3Q8NEB9 887 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 ZNF555Q8NEP9 628 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 BBS10Q8TAM1 723 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 BTBD2Q9BX70 525 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 CXorf56Q9H5V9 222 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 DDX18Q9NVP1 670 aaKnown RBP11.65□□□□□ -0.54
SCAF1-202ENST00000595242 HPF1Q9NWY4 346 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 SPRR3Q9UBC9 169 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 YARS2Q9Y2Z4 477 aaKnown RBP11.65□□□□□ -0.54
SCAF1-202ENST00000595242 ORC6Q9Y5N6 252 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 LYVE1Q9Y5Y7 322 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 GPC6Q9Y625 555 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms