RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 SSR4P51571 173 aa13.86□□□□□ -0.19
VRK3-207ENST00000594092 CDK5R2Q13319 367 aa13.86□□□□□ -0.19
VRK3-207ENST00000594092 BICRALQ6AI39 1079 aa13.86□□□□□ -0.19
VRK3-207ENST00000594092 ULK3Q6PHR2 472 aa13.86□□□□□ -0.19
VRK3-207ENST00000594092 IL20RBQ6UXL0 311 aa13.86□□□□□ -0.19
VRK3-207ENST00000594092 CD300LDQ6UXZ3 194 aa13.86□□□□□ -0.19
VRK3-207ENST00000594092 Q6ZPB1 254 aaPredicted RBP13.86□□□□□ -0.19
VRK3-207ENST00000594092 DEPDC4Q8N2C3 294 aa13.86□□□□□ -0.19
VRK3-207ENST00000594092 CNIH3Q8TBE1 160 aa13.86□□□□□ -0.19
VRK3-207ENST00000594092 PIGXQ8TBF5 258 aa13.86□□□□□ -0.19
VRK3-207ENST00000594092 FAM81AQ8TBF8 368 aa13.86□□□□□ -0.19
VRK3-207ENST00000594092 DUSP19Q8WTR2 217 aa13.86□□□□□ -0.19
VRK3-207ENST00000594092 TMEM239Q8WW34 195 aa13.86□□□□□ -0.19
VRK3-207ENST00000594092 ASB15Q8WXK1 588 aa13.86□□□□□ -0.19
VRK3-207ENST00000594092 ZNF524Q96C55 264 aa13.86□□□□□ -0.19
VRK3-207ENST00000594092 GALNT9Q9HCQ5 603 aa13.86□□□□□ -0.19
VRK3-207ENST00000594092 PIP5K1CO60331 668 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 CRHBPP24387 322 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 EEF1B2P24534 225 aaKnown RBP13.85□□□□□ -0.19
VRK3-207ENST00000594092 POU1F1P28069 291 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 PTGDSP41222 190 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 HLCSP50747 726 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 NR1H2P55055 460 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 CDH15P55291 814 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 MAD2L1BPQ15013 274 aaPredicted RBP13.85□□□□□ -0.19
VRK3-207ENST00000594092 PTGES3Q15185 160 aaKnown RBP13.85□□□□□ -0.19
VRK3-207ENST00000594092 DCAF10Q5QP82 559 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 WBP2NLQ6ICG8 309 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 VASH2Q86V25 355 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 MEX3DQ86XN8 651 aaKnown RBP13.85□□□□□ -0.19
VRK3-207ENST00000594092 CCDC71Q8IV32 467 aaPredicted RBP13.85□□□□□ -0.19
VRK3-207ENST00000594092 NRMQ8IXM6 262 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 SIRT6Q8N6T7 355 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 BRIX1Q8TDN6 353 aaKnown RBP13.85□□□□□ -0.19
VRK3-207ENST00000594092 DNAJA4Q8WW22 397 aaPredicted RBP13.85□□□□□ -0.19
VRK3-207ENST00000594092 C3orf49Q96BT1 292 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 MPP4Q96JB8 637 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 ZNF426Q9BUY5 554 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 KLRF1Q9NZS2 232 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 REV1Q9UBZ9 1251 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 CHCHD2Q9Y6H1 151 aaPredicted RBP13.85□□□□□ -0.19
VRK3-207ENST00000594092 C2orf72A6NCS6 295 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 ZAR1LA6NP61 321 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 H3BN98 237 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 SLC1A7O00341 560 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 TP53I11O14683 189 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 GMFGO60234 142 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 TFAP2AP05549 437 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 CCDC159P0C7I6 412 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 MST1P26927 711 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 ITPKBP27987 946 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 P2RX1P51575 399 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 GABARAPL2P60520 117 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 CDC42P60953 191 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 ALDH6A1Q02252 535 aaKnown RBP13.85□□□□□ -0.19
VRK3-207ENST00000594092 B3GNTL1Q67FW5 361 aaPredicted RBP13.85□□□□□ -0.19
VRK3-207ENST00000594092 LINC00114Q6XXX2 140 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 ENTHD1Q8IYW4 607 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 RNF113BQ8IZP6 322 aaKnown RBP13.85□□□□□ -0.19
VRK3-207ENST00000594092 OR5W2Q8NH69 310 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 B4GALNT2Q8NHY0 566 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 PSMF1Q92530 271 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 ZNF566Q969W8 418 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 FAM46AQ96IP4 442 aaKnown RBP13.85□□□□□ -0.19
VRK3-207ENST00000594092 THOC3Q96J01 351 aaKnown RBP13.85□□□□□ -0.19
VRK3-207ENST00000594092 HS6ST2Q96MM7 605 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 METTL7AQ9H8H3 244 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 RYDENQ9NUL5 291 aaKnown RBP13.85□□□□□ -0.19
VRK3-207ENST00000594092 WDR70Q9NW82 654 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 IMPAD1Q9NX62 359 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 SELENONQ9NZV5 590 aa13.85□□□□□ -0.19
VRK3-207ENST00000594092 TRABD2BA6NFA1 517 aa13.84□□□□□ -0.19
VRK3-207ENST00000594092 SOX14O95416 240 aa13.84□□□□□ -0.19
VRK3-207ENST00000594092 CASP3P42574 277 aa13.84□□□□□ -0.19
VRK3-207ENST00000594092 RBM34P42696 430 aaKnown RBP13.84□□□□□ -0.19
VRK3-207ENST00000594092 CXCR4P61073 352 aa13.84□□□□□ -0.19
VRK3-207ENST00000594092 C17orf67Q0P5P2 114 aa13.84□□□□□ -0.19
VRK3-207ENST00000594092 TSPAN31Q12999 210 aa13.84□□□□□ -0.19
VRK3-207ENST00000594092 TOMM34Q15785 309 aaPredicted RBP13.84□□□□□ -0.19
VRK3-207ENST00000594092 LAIR2Q6ISS4 152 aa13.84□□□□□ -0.19
VRK3-207ENST00000594092 JMJD6Q6NYC1 403 aaPredicted RBP13.84□□□□□ -0.19
VRK3-207ENST00000594092 DND1Q8IYX4 353 aaKnown RBP13.84□□□□□ -0.19
VRK3-207ENST00000594092 TMEM156Q8N614 296 aa13.84□□□□□ -0.19
VRK3-207ENST00000594092 BPIFB6Q8NFQ5 453 aa13.84□□□□□ -0.19
VRK3-207ENST00000594092 PFN4Q8NHR9 129 aa13.84□□□□□ -0.19
VRK3-207ENST00000594092 ZNF563Q8TA94 476 aa13.84□□□□□ -0.19
VRK3-207ENST00000594092 RASSF1Q9NS23 344 aa13.84□□□□□ -0.19
VRK3-207ENST00000594092 CNIH4Q9P003 139 aa13.84□□□□□ -0.19
VRK3-207ENST00000594092 RNF6Q9Y252 685 aa13.84□□□□□ -0.19
VRK3-207ENST00000594092 DOCK10Q96BY6 2186 aa13.83□□□□□ -0.19
VRK3-207ENST00000594092 A0A087WUJ7 227 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 B4DXG7 233 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 KLF4O43474 513 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 TP53P04637 393 aaPredicted RBP13.83□□□□□ -0.2
VRK3-207ENST00000594092 PGCP20142 388 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 SLC1A3P43003 542 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 GPR4P46093 362 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 SRSF6Q13247 344 aaKnown RBP13.83□□□□□ -0.2
VRK3-207ENST00000594092 CBFBQ13951 182 aa13.83□□□□□ -0.2
VRK3-207ENST00000594092 COL28A1Q2UY09 1125 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms