RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 SLC7A1P30825 629 aa13.09□□□□□ -0.31
PNKP-202ENST00000593706 ACVR1BP36896 505 aa13.09□□□□□ -0.31
PNKP-202ENST00000593706 MAGOHP61326 146 aaKnown RBP13.09□□□□□ -0.31
PNKP-202ENST00000593706 HBA1P69905 142 aa13.09□□□□□ -0.31
PNKP-202ENST00000593706 LASP1Q14847 261 aaKnown RBP13.09□□□□□ -0.31
PNKP-202ENST00000593706 STK11Q15831 433 aa13.09□□□□□ -0.31
PNKP-202ENST00000593706 ZNF672Q499Z4 452 aaPredicted RBP13.09□□□□□ -0.31
PNKP-202ENST00000593706 OGFOD2Q6N063 350 aa13.09□□□□□ -0.31
PNKP-202ENST00000593706 NATD1Q8N6N6 113 aa13.09□□□□□ -0.31
PNKP-202ENST00000593706 TMCO5AQ8N6Q1 288 aa13.09□□□□□ -0.31
PNKP-202ENST00000593706 ZNF614Q8N883 585 aa13.09□□□□□ -0.31
PNKP-202ENST00000593706 ATP6V1C2Q8NEY4 427 aa13.09□□□□□ -0.31
PNKP-202ENST00000593706 OR8J2Q8NGG1 315 aa13.09□□□□□ -0.31
PNKP-202ENST00000593706 LILRB1Q8NHL6 650 aaPredicted RBP13.09□□□□□ -0.31
PNKP-202ENST00000593706 FBXO27Q8NI29 283 aa13.09□□□□□ -0.31
PNKP-202ENST00000593706 SFXN5Q8TD22 340 aa13.09□□□□□ -0.31
PNKP-202ENST00000593706 ZFP90Q8TF47 636 aa13.09□□□□□ -0.31
PNKP-202ENST00000593706 NEUROG1Q92886 237 aa13.09□□□□□ -0.31
PNKP-202ENST00000593706 HS6ST2Q96MM7 605 aa13.09□□□□□ -0.31
PNKP-202ENST00000593706 STACQ99469 402 aa13.09□□□□□ -0.31
PNKP-202ENST00000593706 NUF2Q9BZD4 464 aa13.09□□□□□ -0.31
PNKP-202ENST00000593706 SLCO5A1Q9H2Y9 848 aa13.09□□□□□ -0.31
PNKP-202ENST00000593706 IGHV3-15A0A0B4J1V0 119 aa13.08□□□□□ -0.32
PNKP-202ENST00000593706 NPIPA5A0A0B4J1W7 369 aa13.08□□□□□ -0.32
PNKP-202ENST00000593706 NPIPA7E9PJI5 369 aa13.08□□□□□ -0.32
PNKP-202ENST00000593706 H3BNH8 94 aa13.08□□□□□ -0.32
PNKP-202ENST00000593706 SDHDO14521 159 aa13.08□□□□□ -0.32
PNKP-202ENST00000593706 PRKD3O94806 890 aa13.08□□□□□ -0.32
PNKP-202ENST00000593706 YES1P07947 543 aa13.08□□□□□ -0.32
PNKP-202ENST00000593706 ALDOCP09972 364 aaKnown RBP13.08□□□□□ -0.32
PNKP-202ENST00000593706 NPIPA8P0DM63 369 aa13.08□□□□□ -0.32
PNKP-202ENST00000593706 PHC1P78364 1004 aa13.08□□□□□ -0.32
PNKP-202ENST00000593706 ITGADQ13349 1161 aa13.08□□□□□ -0.32
PNKP-202ENST00000593706 CASP8Q14790 479 aa13.08□□□□□ -0.32
PNKP-202ENST00000593706 P2RY6Q15077 328 aa13.08□□□□□ -0.32
PNKP-202ENST00000593706 HMBOX1Q6NT76 420 aa13.08□□□□□ -0.32
PNKP-202ENST00000593706 CDC73Q6P1J9 531 aa13.08□□□□□ -0.32
PNKP-202ENST00000593706 BHLHA15Q7RTS1 189 aaPredicted RBP13.08□□□□□ -0.32
PNKP-202ENST00000593706 MTERF4Q7Z6M4 381 aaKnown RBP13.08□□□□□ -0.32
PNKP-202ENST00000593706 ATG4DQ86TL0 474 aaPredicted RBP13.08□□□□□ -0.32
PNKP-202ENST00000593706 OR56A1Q8NGH5 318 aa13.08□□□□□ -0.32
PNKP-202ENST00000593706 TESCQ96BS2 214 aa13.08□□□□□ -0.32
PNKP-202ENST00000593706 USB1Q9BQ65 265 aaKnown RBP13.08□□□□□ -0.32
PNKP-202ENST00000593706 DUSP26Q9BV47 211 aa13.08□□□□□ -0.32
PNKP-202ENST00000593706 PIGUQ9H490 435 aa13.08□□□□□ -0.32
PNKP-202ENST00000593706 SERHL2Q9H4I8 314 aa13.08□□□□□ -0.32
PNKP-202ENST00000593706 GP6Q9HCN6 339 aa13.08□□□□□ -0.32
PNKP-202ENST00000593706 FAIMQ9NVQ4 179 aa13.08□□□□□ -0.32
PNKP-202ENST00000593706 KLHL9Q9P2J3 617 aa13.08□□□□□ -0.32
PNKP-202ENST00000593706 CARD8Q9Y2G2 431 aa13.08□□□□□ -0.32
PNKP-202ENST00000593706 GPC6Q9Y625 555 aaPredicted RBP13.08□□□□□ -0.32
PNKP-202ENST00000593706 SVEP1Q4LDE5 3571 aa13.07□□□□□ -0.32
PNKP-202ENST00000593706 RNF212BA8MTL3 300 aa13.07□□□□□ -0.32
PNKP-202ENST00000593706 NPIPB9F8W1W9 429 aa13.07□□□□□ -0.32
PNKP-202ENST00000593706 GTPBP1O00178 669 aaKnown RBP13.07□□□□□ -0.32
PNKP-202ENST00000593706 RNASET2O00584 256 aaKnown RBP13.07□□□□□ -0.32
PNKP-202ENST00000593706 ZNF195O14628 629 aa13.07□□□□□ -0.32
PNKP-202ENST00000593706 TLX2O43763 284 aaPredicted RBP13.07□□□□□ -0.32
PNKP-202ENST00000593706 LYZL6O75951 148 aa13.07□□□□□ -0.32
PNKP-202ENST00000593706 IFNA2P01563 188 aa13.07□□□□□ -0.32
PNKP-202ENST00000593706 IGHV4-39P01824 125 aa13.07□□□□□ -0.32
PNKP-202ENST00000593706 CCT3P49368 545 aaKnown RBP13.07□□□□□ -0.32
PNKP-202ENST00000593706 P2RX1P51575 399 aa13.07□□□□□ -0.32
PNKP-202ENST00000593706 CCR4P51679 360 aa13.07□□□□□ -0.32
PNKP-202ENST00000593706 SUMO3P55854 103 aaPredicted RBP13.07□□□□□ -0.32
PNKP-202ENST00000593706 SELENBP1Q13228 472 aa13.07□□□□□ -0.32
PNKP-202ENST00000593706 TP53BP2Q13625 1128 aa13.07□□□□□ -0.32
PNKP-202ENST00000593706 LSM12Q3MHD2 195 aaKnown RBP13.07□□□□□ -0.32
PNKP-202ENST00000593706 TMEM176BQ3YBM2 270 aaPredicted RBP13.07□□□□□ -0.32
PNKP-202ENST00000593706 DCST2Q5T1A1 773 aa13.07□□□□□ -0.32
PNKP-202ENST00000593706 HHATQ5VTY9 493 aa13.07□□□□□ -0.32
PNKP-202ENST00000593706 PODNL1Q6PEZ8 512 aa13.07□□□□□ -0.32
PNKP-202ENST00000593706 CBLN3Q6UW01 205 aa13.07□□□□□ -0.32
PNKP-202ENST00000593706 MAVSQ7Z434 540 aa13.07□□□□□ -0.32
PNKP-202ENST00000593706 CLECL1Q8IZS7 167 aa13.07□□□□□ -0.32
PNKP-202ENST00000593706 SLC43A2Q8N370 569 aa13.07□□□□□ -0.32
PNKP-202ENST00000593706 RFWD2Q8NHY2 731 aa13.07□□□□□ -0.32
PNKP-202ENST00000593706 TEX37Q96LM6 180 aa13.07□□□□□ -0.32
PNKP-202ENST00000593706 PRPF18Q99633 342 aaKnown RBP13.07□□□□□ -0.32
PNKP-202ENST00000593706 ACTRT3Q9BYD9 372 aa13.07□□□□□ -0.32
PNKP-202ENST00000593706 COQ10BQ9H8M1 238 aa13.07□□□□□ -0.32
PNKP-202ENST00000593706 BARX1Q9HBU1 254 aaPredicted RBP13.07□□□□□ -0.32
PNKP-202ENST00000593706 YAE1D1Q9NRH1 226 aa13.07□□□□□ -0.32
PNKP-202ENST00000593706 THAP1Q9NVV9 213 aa13.07□□□□□ -0.32
PNKP-202ENST00000593706 KCNE3Q9Y6H6 103 aa13.07□□□□□ -0.32
PNKP-202ENST00000593706 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.06□□□□□ -0.322e-6■■■■□ 22.1
PNKP-202ENST00000593706 MALRD1Q5VYJ5 2156 aa13.06□□□□□ -0.32
PNKP-202ENST00000593706 OIP5O43482 229 aa13.06□□□□□ -0.32
PNKP-202ENST00000593706 CD5LO43866 347 aa13.06□□□□□ -0.32
PNKP-202ENST00000593706 ADAM11O75078 769 aa13.06□□□□□ -0.32
PNKP-202ENST00000593706 LBPP18428 481 aa13.06□□□□□ -0.32
PNKP-202ENST00000593706 CDH11P55287 796 aa13.06□□□□□ -0.32
PNKP-202ENST00000593706 PPA1Q15181 289 aa13.06□□□□□ -0.32
PNKP-202ENST00000593706 NDUFAF6Q330K2 333 aa13.06□□□□□ -0.32
PNKP-202ENST00000593706 SPDYE7PQ495Y7 208 aa13.06□□□□□ -0.32
PNKP-202ENST00000593706 OR4F3Q6IEY1 312 aa13.06□□□□□ -0.32
PNKP-202ENST00000593706 Q6ZT83 130 aa13.06□□□□□ -0.32
PNKP-202ENST00000593706 PIWIL2Q8TC59 973 aaKnown RBP13.06□□□□□ -0.32
PNKP-202ENST00000593706 MGARPQ8TDB4 240 aa13.06□□□□□ -0.32
PNKP-202ENST00000593706 ADAMTS15Q8TE58 950 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms