RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 SKP2Q13309 424 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 GPR68Q15743 365 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 ZNF239Q16600 458 aaKnown RBP11.78□□□□□ -0.52
H3F3B-213ENST00000593254 FAM174BQ3ZCQ3 159 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 SAXO2Q658L1 398 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 C16orf62Q7Z3J2 963 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 YTHDF3Q7Z739 585 aaKnown RBP11.78□□□□□ -0.52
H3F3B-213ENST00000593254 TMCO5AQ8N6Q1 288 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 OR5W2Q8NH69 310 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 RNF128Q8TEB7 428 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 OIT3Q8WWZ8 545 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 PIGTQ969N2 578 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 CPNE4Q96A23 557 aaPredicted RBP11.78□□□□□ -0.52
H3F3B-213ENST00000593254 NEURL3Q96EH8 262 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 TEX37Q96LM6 180 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 CCDC115Q96NT0 180 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 COQ10BQ9H8M1 238 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 EXD2Q9NVH0 621 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 AIG1Q9NVV5 245 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 THAP1Q9NVV9 213 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 ZNF226Q9NYT6 803 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 C6orf203Q9P0P8 240 aaPredicted RBP11.78□□□□□ -0.52
H3F3B-213ENST00000593254 MKLN1Q9UL63 735 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 GJE1A6NN92 205 aa11.77□□□□□ -0.53
H3F3B-213ENST00000593254 HDAC3O15379 428 aa11.77□□□□□ -0.53
H3F3B-213ENST00000593254 CRLF1O75462 422 aa11.77□□□□□ -0.53
H3F3B-213ENST00000593254 PABPC4LP0CB38 370 aaKnown RBP11.77□□□□□ -0.53
H3F3B-213ENST00000593254 OR12D1P0DN82 309 aa11.77□□□□□ -0.53
H3F3B-213ENST00000593254 AGTR1P30556 359 aa11.77□□□□□ -0.53
H3F3B-213ENST00000593254 S100A3P33764 101 aa11.77□□□□□ -0.53
H3F3B-213ENST00000593254 CASP9P55211 416 aa11.77□□□□□ -0.53
H3F3B-213ENST00000593254 UFM1P61960 85 aa11.77□□□□□ -0.53
H3F3B-213ENST00000593254 FUT5Q11128 374 aa11.77□□□□□ -0.53
H3F3B-213ENST00000593254 SELENBP1Q13228 472 aa11.77□□□□□ -0.53
H3F3B-213ENST00000593254 CBFBQ13951 182 aa11.77□□□□□ -0.53
H3F3B-213ENST00000593254 QPRTQ15274 297 aa11.77□□□□□ -0.53
H3F3B-213ENST00000593254 TMEM176BQ3YBM2 270 aaPredicted RBP11.77□□□□□ -0.53
H3F3B-213ENST00000593254 GTF2IRD2BQ6EKJ0 949 aa11.77□□□□□ -0.53
H3F3B-213ENST00000593254 TNFAIP8L2Q6P589 184 aaPredicted RBP11.77□□□□□ -0.53
H3F3B-213ENST00000593254 C22orf34Q6ZV56 151 aa11.77□□□□□ -0.53
H3F3B-213ENST00000593254 OLIG3Q7RTU3 272 aa11.77□□□□□ -0.53
H3F3B-213ENST00000593254 ZNF550Q7Z398 422 aa11.77□□□□□ -0.53
H3F3B-213ENST00000593254 SPATA19Q7Z5L4 167 aa11.77□□□□□ -0.53
H3F3B-213ENST00000593254 GTF2IRD2Q86UP8 949 aa11.77□□□□□ -0.53
H3F3B-213ENST00000593254 RFWD2Q8NHY2 731 aa11.77□□□□□ -0.53
H3F3B-213ENST00000593254 ZFP90Q8TF47 636 aa11.77□□□□□ -0.53
H3F3B-213ENST00000593254 MARK4Q96L34 752 aa11.77□□□□□ -0.53
H3F3B-213ENST00000593254 SRXN1Q9BYN0 137 aa11.77□□□□□ -0.53
H3F3B-213ENST00000593254 LAT2Q9GZY6 243 aa11.77□□□□□ -0.53
H3F3B-213ENST00000593254 SAP130Q9H0E3 1048 aa11.77□□□□□ -0.53
H3F3B-213ENST00000593254 TIGARQ9NQ88 270 aa11.77□□□□□ -0.53
H3F3B-213ENST00000593254 POLE3Q9NRF9 147 aa11.77□□□□□ -0.53
H3F3B-213ENST00000593254 BTNL2Q9UIR0 455 aa11.77□□□□□ -0.53
H3F3B-213ENST00000593254 TRPC5OSA6NMA1 111 aa11.76□□□□□ -0.53
H3F3B-213ENST00000593254 CSTAP01040 98 aa11.76□□□□□ -0.53
H3F3B-213ENST00000593254 EPHA3P29320 983 aa11.76□□□□□ -0.53
H3F3B-213ENST00000593254 IL12AP29459 219 aa11.76□□□□□ -0.53
H3F3B-213ENST00000593254 KHKP50053 298 aa11.76□□□□□ -0.53
H3F3B-213ENST00000593254 CCR4P51679 360 aa11.76□□□□□ -0.53
H3F3B-213ENST00000593254 RNPS1Q15287 305 aaKnown RBP11.76□□□□□ -0.53
H3F3B-213ENST00000593254 MAPK14Q16539 360 aa11.76□□□□□ -0.53
H3F3B-213ENST00000593254 EXOC3L2Q2M3D2 409 aa11.76□□□□□ -0.53
H3F3B-213ENST00000593254 BEND6Q5SZJ8 279 aaPredicted RBP11.76□□□□□ -0.53
H3F3B-213ENST00000593254 ATAD3BQ5T9A4 648 aa11.76□□□□□ -0.53
H3F3B-213ENST00000593254 TYW3Q6IPR3 259 aaKnown RBP11.76□□□□□ -0.53
H3F3B-213ENST00000593254 STAC2Q6ZMT1 411 aa11.76□□□□□ -0.53
H3F3B-213ENST00000593254 FRRS1Q6ZNA5 592 aa11.76□□□□□ -0.53
H3F3B-213ENST00000593254 BEND4Q6ZU67 534 aa11.76□□□□□ -0.53
H3F3B-213ENST00000593254 EIF3MQ7L2H7 374 aaKnown RBP11.76□□□□□ -0.53
H3F3B-213ENST00000593254 PHC2Q8IXK0 858 aa11.76□□□□□ -0.53
H3F3B-213ENST00000593254 FAM71CQ8NEG0 241 aa11.76□□□□□ -0.53
H3F3B-213ENST00000593254 RAB3IL1Q8TBN0 382 aa11.76□□□□□ -0.53
H3F3B-213ENST00000593254 MGARPQ8TDB4 240 aa11.76□□□□□ -0.53
H3F3B-213ENST00000593254 ABHD3Q8WU67 409 aa11.76□□□□□ -0.53
H3F3B-213ENST00000593254 XAGE5Q8WWM1 108 aa11.76□□□□□ -0.53
H3F3B-213ENST00000593254 ROBO4Q8WZ75 1007 aa11.76□□□□□ -0.53
H3F3B-213ENST00000593254 ST8SIA1Q92185 356 aa11.76□□□□□ -0.53
H3F3B-213ENST00000593254 RAB8BQ92930 207 aa11.76□□□□□ -0.53
H3F3B-213ENST00000593254 TLCD1Q96CP7 247 aa11.76□□□□□ -0.53
H3F3B-213ENST00000593254 REXO5Q96IC2 774 aaKnown RBP11.76□□□□□ -0.53
H3F3B-213ENST00000593254 SLC35A5Q9BS91 424 aa11.76□□□□□ -0.53
H3F3B-213ENST00000593254 THUMPD3Q9BV44 507 aaKnown RBP11.76□□□□□ -0.53
H3F3B-213ENST00000593254 KLHL4Q9C0H6 718 aa11.76□□□□□ -0.53
H3F3B-213ENST00000593254 WDR55Q9H6Y2 383 aaPredicted RBP11.76□□□□□ -0.53
H3F3B-213ENST00000593254 GP6Q9HCN6 339 aa11.76□□□□□ -0.53
H3F3B-213ENST00000593254 MARCOQ9UEW3 520 aaPredicted RBP11.76□□□□□ -0.53
H3F3B-213ENST00000593254 WDR45Q9Y484 360 aa11.76□□□□□ -0.53
H3F3B-213ENST00000593254 GPR45Q9Y5Y3 372 aa11.76□□□□□ -0.53
H3F3B-213ENST00000593254 PLCE1Q9P212 2302 aa11.76□□□□□ -0.53
H3F3B-213ENST00000593254 GOLGA8QA0A0J9YX86 632 aa11.75□□□□□ -0.53
H3F3B-213ENST00000593254 PRAMEF27A3QJZ7 478 aa11.75□□□□□ -0.53
H3F3B-213ENST00000593254 GOLGA8OA6NCC3 632 aa11.75□□□□□ -0.53
H3F3B-213ENST00000593254 C9JVG2 144 aa11.75□□□□□ -0.53
H3F3B-213ENST00000593254 GOLGA8NF8WBI6 632 aa11.75□□□□□ -0.53
H3F3B-213ENST00000593254 SLCO1B7G3V0H7 640 aa11.75□□□□□ -0.53
H3F3B-213ENST00000593254 HMGN4O00479 90 aa11.75□□□□□ -0.53
H3F3B-213ENST00000593254 ERLIN1O75477 346 aa11.75□□□□□ -0.53
H3F3B-213ENST00000593254 C1QCP02747 245 aa11.75□□□□□ -0.53
H3F3B-213ENST00000593254 PGRP06401 933 aa11.75□□□□□ -0.53
H3F3B-213ENST00000593254 THBDP07204 575 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms