RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 GATSQ8NAP1 163 aa12.3□□□□□ -0.44
VMP1-217ENST00000593168 ACOT11Q8WXI4 607 aaPredicted RBP12.3□□□□□ -0.44
VMP1-217ENST00000593168 FER1L6-AS2Q96M78 137 aa12.3□□□□□ -0.44
VMP1-217ENST00000593168 NODALQ96S42 347 aa12.3□□□□□ -0.44
VMP1-217ENST00000593168 SECISBP2Q96T21 854 aaKnown RBP12.3□□□□□ -0.44
VMP1-217ENST00000593168 HHATLQ9HCP6 504 aa12.3□□□□□ -0.44
VMP1-217ENST00000593168 KRT84Q9NSB2 600 aa12.3□□□□□ -0.44
VMP1-217ENST00000593168 KIF17Q9P2E2 1029 aa12.3□□□□□ -0.44
VMP1-217ENST00000593168 CARD8Q9Y2G2 431 aa12.3□□□□□ -0.44
VMP1-217ENST00000593168 EXPH5Q8NEV8 1989 aa12.3□□□□□ -0.44
VMP1-217ENST00000593168 A0A1B0GWA3 101 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 ADAM10O14672 748 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 TP53I11O14683 189 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 SLC16A6O15403 523 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 OIP5O43482 229 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 CHP2O43745 196 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 OR10H3O60404 316 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 GASTP01350 101 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 CAPGP40121 348 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 CASRP41180 1078 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 SSR4P51571 173 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 COPZ1P61923 177 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 RPP38P78345 283 aaKnown RBP12.29□□□□□ -0.44
VMP1-217ENST00000593168 C17orf67Q0P5P2 114 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 ATP1A4Q13733 1029 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 NDUFAF6Q330K2 333 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 SWT1Q5T5J6 900 aaKnown RBP12.29□□□□□ -0.44
VMP1-217ENST00000593168 C1orf94Q6P1W5 598 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 TMEM81Q6P7N7 255 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 ULK3Q6PHR2 472 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 CBLN3Q6UW01 205 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 RRM2BQ7LG56 351 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 NKAIN4Q8IVV8 208 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 APLFQ8IW19 511 aaPredicted RBP12.29□□□□□ -0.44
VMP1-217ENST00000593168 RNF113BQ8IZP6 322 aaKnown RBP12.29□□□□□ -0.44
VMP1-217ENST00000593168 PARP8Q8N3A8 854 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 MARVELD2Q8N4S9 558 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 AQP11Q8NBQ7 271 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 OR4K5Q8NGD3 323 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 OR9Q2Q8NGE9 314 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 GRHL3Q8TE85 626 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 DNAJA4Q8WW22 397 aaPredicted RBP12.29□□□□□ -0.44
VMP1-217ENST00000593168 ASB15Q8WXK1 588 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 MPP4Q96JB8 637 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 HS6ST2Q96MM7 605 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 PRSS27Q9BQR3 290 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 DGCR6LQ9BY27 220 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 RTN4RQ9BZR6 473 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 TOR3AQ9H497 397 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 ZNF556Q9HAH1 456 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 ATP13A2Q9NQ11 1180 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 PAPOLBQ9NRJ5 636 aaKnown RBP12.29□□□□□ -0.44
VMP1-217ENST00000593168 ENOPH1Q9UHY7 261 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 SLC7A7Q9UM01 511 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 POFUT2Q9Y2G5 429 aa12.29□□□□□ -0.44
VMP1-217ENST00000593168 PCSK5Q92824 1860 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 MASP2O00187 686 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 HCRTR2O43614 444 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 SCO2O43819 266 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 MITFO75030 526 aaPredicted RBP12.28□□□□□ -0.44
VMP1-217ENST00000593168 RYKP34925 604 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 SOX3P41225 446 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 GAS1P54826 345 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 UGT2B15P54855 530 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 ZNF117Q03924 483 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 COX10Q12887 443 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 FOXD4Q12950 439 aaPredicted RBP12.28□□□□□ -0.44
VMP1-217ENST00000593168 AIMP2Q13155 320 aaKnown RBP12.28□□□□□ -0.44
VMP1-217ENST00000593168 MEP1AQ16819 746 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 ZIK1Q3SY52 487 aaPredicted RBP12.28□□□□□ -0.44
VMP1-217ENST00000593168 DCAF10Q5QP82 559 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 WBP2NLQ6ICG8 309 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 PGBD2Q6P3X8 592 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 CD300LDQ6UXZ3 194 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 ZNF730Q6ZMV8 503 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 MBOAT2Q6ZWT7 520 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 USP51Q70EK9 711 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 ZER1Q7Z7L7 766 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 CHERPQ8IWX8 916 aaKnown RBP12.28□□□□□ -0.44
VMP1-217ENST00000593168 ZNF555Q8NEP9 628 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 OR5M3Q8NGP4 307 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 OR5W2Q8NH69 310 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 PSMF1Q92530 271 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 ARSGQ96EG1 525 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 ZNF570Q96NI8 536 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 MBOAT4Q96T53 435 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 NIPSNAP1Q9BPW8 284 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 GABARAPL3Q9BY60 117 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 ANKRD60Q9BZ19 345 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 ZNF71Q9NQZ8 489 aaPredicted RBP12.28□□□□□ -0.44
VMP1-217ENST00000593168 SDHAF3Q9NRP4 125 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 FAM118AQ9NWS6 357 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 RPS6KB2Q9UBS0 482 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 TUBD1Q9UJT1 453 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 ICAM5Q9UMF0 924 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 USP9YO00507 2555 aaPredicted RBP12.28□□□□□ -0.44
VMP1-217ENST00000593168 HEATR5AQ86XA9 2040 aa12.28□□□□□ -0.44
VMP1-217ENST00000593168 IGLV3-32A0A0A0MS00 114 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 E9PQ18 207 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 CDK2AP1O14519 115 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms