RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 CLDN8P56748 225 aa18.15■□□□□ 0.5
TRIM47-207ENST00000593089 VSNL1P62760 191 aa18.15■□□□□ 0.5
TRIM47-207ENST00000593089 EMX2Q04743 252 aa18.15■□□□□ 0.5
TRIM47-207ENST00000593089 RASGEF1BQ0VAM2 473 aa18.15■□□□□ 0.5
TRIM47-207ENST00000593089 SKP2Q13309 424 aa18.15■□□□□ 0.5
TRIM47-207ENST00000593089 TNK1Q13470 666 aa18.15■□□□□ 0.5
TRIM47-207ENST00000593089 STK11Q15831 433 aa18.15■□□□□ 0.5
TRIM47-207ENST00000593089 KBTBD8Q8NFY9 601 aa18.15■□□□□ 0.5
TRIM47-207ENST00000593089 ARL8AQ96BM9 186 aa18.15■□□□□ 0.5
TRIM47-207ENST00000593089 ZNF300Q96RE9 604 aaPredicted RBP18.15■□□□□ 0.5
TRIM47-207ENST00000593089 POTEKPQ9BYX7 375 aa18.15■□□□□ 0.5
TRIM47-207ENST00000593089 ROPN1BQ9BZX4 212 aaPredicted RBP18.15■□□□□ 0.5
TRIM47-207ENST00000593089 LAT2Q9GZY6 243 aa18.15■□□□□ 0.5
TRIM47-207ENST00000593089 ROPN1Q9HAT0 212 aaPredicted RBP18.15■□□□□ 0.5
TRIM47-207ENST00000593089 NOP53Q9NZM5 478 aaKnown RBP18.15■□□□□ 0.5
TRIM47-207ENST00000593089 TLN2Q9Y4G6 2542 aa18.15■□□□□ 0.5
TRIM47-207ENST00000593089 HIVEP2P31629 2446 aa18.14■□□□□ 0.5
TRIM47-207ENST00000593089 CSPG4Q6UVK1 2322 aa18.14■□□□□ 0.49
TRIM47-207ENST00000593089 ETV2O00321 342 aaPredicted RBP18.14■□□□□ 0.49
TRIM47-207ENST00000593089 UGT2B17O75795 530 aa18.14■□□□□ 0.49
TRIM47-207ENST00000593089 AK1P00568 194 aa18.14■□□□□ 0.49
TRIM47-207ENST00000593089 CSTAP01040 98 aa18.14■□□□□ 0.49
TRIM47-207ENST00000593089 UBTFL6P0CB48 400 aaPredicted RBP18.14■□□□□ 0.49
TRIM47-207ENST00000593089 EDNRAP25101 427 aa18.14■□□□□ 0.49
TRIM47-207ENST00000593089 CDKN1AP38936 164 aa18.14■□□□□ 0.49
TRIM47-207ENST00000593089 C21orf58P58505 322 aa18.14■□□□□ 0.49
TRIM47-207ENST00000593089 BSPH1Q075Z2 132 aa18.14■□□□□ 0.49
TRIM47-207ENST00000593089 VEZF1Q14119 521 aa18.14■□□□□ 0.49
TRIM47-207ENST00000593089 ZNF141Q15928 474 aa18.14■□□□□ 0.49
TRIM47-207ENST00000593089 PDCD2Q16342 344 aaPredicted RBP18.14■□□□□ 0.49
TRIM47-207ENST00000593089 CLEC12BQ2HXU8 276 aa18.14■□□□□ 0.49
TRIM47-207ENST00000593089 ARHGAP11BQ3KRB8 267 aa18.14■□□□□ 0.49
TRIM47-207ENST00000593089 Q6ZT83 130 aa18.14■□□□□ 0.49
TRIM47-207ENST00000593089 C16orf62Q7Z3J2 963 aa18.14■□□□□ 0.49
TRIM47-207ENST00000593089 NUDCD3Q8IVD9 361 aa18.14■□□□□ 0.49
TRIM47-207ENST00000593089 OR4A15Q8NGL6 344 aa18.14■□□□□ 0.49
TRIM47-207ENST00000593089 SMAP2Q8WU79 429 aaPredicted RBP18.14■□□□□ 0.49
TRIM47-207ENST00000593089 GTPBP3Q969Y2 492 aaKnown RBP18.14■□□□□ 0.49
TRIM47-207ENST00000593089 TRMT61AQ96FX7 289 aaKnown RBP18.14■□□□□ 0.49
TRIM47-207ENST00000593089 PKNOX2Q96KN3 472 aa18.14■□□□□ 0.49
TRIM47-207ENST00000593089 OR51I1Q9H343 314 aa18.14■□□□□ 0.49
TRIM47-207ENST00000593089 MAGED1Q9Y5V3 778 aaPredicted RBP18.14■□□□□ 0.49
TRIM47-207ENST00000593089 ITM2AO43736 263 aa18.13■□□□□ 0.49
TRIM47-207ENST00000593089 TYROBPO43914 113 aa18.13■□□□□ 0.49
TRIM47-207ENST00000593089 CYTIPO60759 359 aa18.13■□□□□ 0.49
TRIM47-207ENST00000593089 DANCRP0C864 163 aa18.13■□□□□ 0.49
TRIM47-207ENST00000593089 ETV4P43268 484 aa18.13■□□□□ 0.49
TRIM47-207ENST00000593089 SESN3P58005 492 aa18.13■□□□□ 0.49
TRIM47-207ENST00000593089 MERTKQ12866 999 aa18.13■□□□□ 0.49
TRIM47-207ENST00000593089 ZNF672Q499Z4 452 aaPredicted RBP18.13■□□□□ 0.49
TRIM47-207ENST00000593089 SEZ6L2Q6UXD5 910 aa18.13■□□□□ 0.49
TRIM47-207ENST00000593089 MAPK1IP1LQ8NDC0 245 aa18.13■□□□□ 0.49
TRIM47-207ENST00000593089 PIWIL2Q8TC59 973 aaKnown RBP18.13■□□□□ 0.49
TRIM47-207ENST00000593089 ST8SIA1Q92185 356 aa18.13■□□□□ 0.49
TRIM47-207ENST00000593089 USB1Q9BQ65 265 aaKnown RBP18.13■□□□□ 0.49
TRIM47-207ENST00000593089 ZNF350Q9GZX5 532 aa18.13■□□□□ 0.49
TRIM47-207ENST00000593089 SERINC1Q9NRX5 453 aa18.13■□□□□ 0.49
TRIM47-207ENST00000593089 EXD2Q9NVH0 621 aa18.13■□□□□ 0.49
TRIM47-207ENST00000593089 ASIC5Q9NY37 505 aa18.13■□□□□ 0.49
TRIM47-207ENST00000593089 ZANQ9Y493 2812 aa18.13■□□□□ 0.49
TRIM47-207ENST00000593089 A0A1W2PP18 115 aa18.12■□□□□ 0.49
TRIM47-207ENST00000593089 WDR91A4D1P6 747 aa18.12■□□□□ 0.49
TRIM47-207ENST00000593089 DPRXA6NFQ7 191 aa18.12■□□□□ 0.49
TRIM47-207ENST00000593089 RNF223E7ERA6 249 aa18.12■□□□□ 0.49
TRIM47-207ENST00000593089 OVOL3O00110 214 aa18.12■□□□□ 0.49
TRIM47-207ENST00000593089 RNASET2O00584 256 aaKnown RBP18.12■□□□□ 0.49
TRIM47-207ENST00000593089 DNAJA2O60884 412 aa18.12■□□□□ 0.49
TRIM47-207ENST00000593089 CPSF4O95639 269 aaKnown RBP18.12■□□□□ 0.49
TRIM47-207ENST00000593089 FESP07332 822 aa18.12■□□□□ 0.49
TRIM47-207ENST00000593089 PGCP20142 388 aa18.12■□□□□ 0.49
TRIM47-207ENST00000593089 DIO1P49895 249 aa18.12■□□□□ 0.49
TRIM47-207ENST00000593089 FAPQ12884 760 aa18.12■□□□□ 0.49
TRIM47-207ENST00000593089 EIF3MQ7L2H7 374 aaKnown RBP18.12■□□□□ 0.49
TRIM47-207ENST00000593089 ANKRD46Q86W74 232 aa18.12■□□□□ 0.49
TRIM47-207ENST00000593089 ZNF100Q8IYN0 542 aa18.12■□□□□ 0.49
TRIM47-207ENST00000593089 ZNF781Q8N8C0 355 aa18.12■□□□□ 0.49
TRIM47-207ENST00000593089 TMEM234Q8WY98 164 aa18.12■□□□□ 0.49
TRIM47-207ENST00000593089 AKTIPQ9H8T0 292 aa18.12■□□□□ 0.49
TRIM47-207ENST00000593089 PCDHGB4Q9UN71 923 aa18.12■□□□□ 0.49
TRIM47-207ENST00000593089 LIPT1Q9Y234 373 aa18.12■□□□□ 0.49
TRIM47-207ENST00000593089 JMJD1CQ15652 2540 aa18.12■□□□□ 0.49
TRIM47-207ENST00000593089 ZNF724A8MTY0 619 aa18.11■□□□□ 0.49
TRIM47-207ENST00000593089 SULT2B1O00204 365 aa18.11■□□□□ 0.49
TRIM47-207ENST00000593089 OR12D1P0DN82 309 aa18.11■□□□□ 0.49
TRIM47-207ENST00000593089 PPA1Q15181 289 aa18.11■□□□□ 0.49
TRIM47-207ENST00000593089 MAPK14Q16539 360 aa18.11■□□□□ 0.49
TRIM47-207ENST00000593089 SMU1Q2TAY7 513 aa18.11■□□□□ 0.49
TRIM47-207ENST00000593089 SYT14P1Q58G82 188 aa18.11■□□□□ 0.49
TRIM47-207ENST00000593089 TNFAIP8L2Q6P589 184 aaPredicted RBP18.11■□□□□ 0.49
TRIM47-207ENST00000593089 TMPPEQ6ZT21 453 aa18.11■□□□□ 0.49
TRIM47-207ENST00000593089 GALNT5Q7Z7M9 940 aa18.11■□□□□ 0.49
TRIM47-207ENST00000593089 XAGE5Q8WWM1 108 aa18.11■□□□□ 0.49
TRIM47-207ENST00000593089 ZNF75CPQ92670 426 aaPredicted RBP18.11■□□□□ 0.49
TRIM47-207ENST00000593089 RAB8BQ92930 207 aa18.11■□□□□ 0.49
TRIM47-207ENST00000593089 DNAJA3Q96EY1 480 aa18.11■□□□□ 0.49
TRIM47-207ENST00000593089 DPY30Q9C005 99 aa18.11■□□□□ 0.49
TRIM47-207ENST00000593089 ACER3Q9NUN7 267 aa18.11■□□□□ 0.49
TRIM47-207ENST00000593089 KIAA0513O60268 411 aa18.1■□□□□ 0.49
TRIM47-207ENST00000593089 RAMP1O60894 148 aa18.1■□□□□ 0.49
TRIM47-207ENST00000593089 TFPIP10646 304 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms