RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 HMGA1P17096 107 aaKnown RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 SLC6A1P30531 599 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 EVI2BP34910 448 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 ACVR1BP36896 505 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 CCR4P51679 360 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 TAS2R19P59542 299 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 GALK2Q01415 458 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 IFITM2Q01629 132 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 PRDX1Q06830 199 aaKnown RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 DPTQ07507 201 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 CRYZQ08257 329 aaKnown RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 CRHR2Q13324 411 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 SLC14A1Q13336 389 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 RAB11BQ15907 218 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 POM121L1PQ3SYA9 428 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 FLYWCH1Q4VC44 716 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 SOWAHCQ53LP3 525 aaPredicted RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 LRRC73Q5JTD7 316 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 ENPP7Q6UWV6 458 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 ADAMTSL4Q6UY14 1074 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 Q6ZNB5 142 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 DGLUCYQ7Z3D6 616 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 TAF8Q7Z7C8 310 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 ZER1Q7Z7L7 766 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 SIAH3Q8IW03 269 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 GLB1L2Q8IW92 636 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 C2orf73Q8N5S3 287 aaPredicted RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 LSMEM1Q8N8F7 131 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 NLGN2Q8NFZ4 835 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 OR4F15Q8NGB8 312 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 OR5D16Q8NGK9 328 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 OR1J4Q8NGS1 313 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 OR2L8Q8NGY9 312 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 OR5AK2Q8NH90 309 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 ZNF563Q8TA94 476 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 GPR148Q8TDV2 347 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 PIGKQ92643 395 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 BPIFA2Q96DR5 249 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 CPNE2Q96FN4 548 aaPredicted RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 PRRT1Q99946 306 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 SLC25A21Q9BQT8 299 aaPredicted RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 IER2Q9BTL4 223 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 ZNF416Q9BWM5 594 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 JAM3Q9BX67 310 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 ZNF471Q9BX82 626 aaPredicted RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 MFFQ9GZY8 342 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 MARCH5Q9NX47 278 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 PLEKHB1Q9UF11 243 aaPredicted RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 LSM2Q9Y333 95 aaKnown RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 CSNK1G3Q9Y6M4 447 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 COL4A5P29400 1685 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 TSPAN11A1L157 253 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 TMEM200CA6NKL6 621 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 SURF4O15260 269 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 CCL16O15467 120 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 SEC14L5O43304 696 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 AQP8O94778 261 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 KLHL18O94889 574 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 PMS2P2O95744 297 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 CSF2RAP15509 400 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 ZNF823P16415 610 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 PRKACAP17612 351 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 TYRP1P17643 537 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 PVALBP20472 110 aaPredicted RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 RFX2P48378 723 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 PGFP49763 221 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 PRKXP51817 358 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 CTSCP53634 463 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 OR12D2P58182 307 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 SIRPAP78324 504 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 RAE1P78406 368 aaKnown RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 PRKCZQ05513 592 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 AIMP2Q13155 320 aaKnown RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 ZMYND11Q15326 602 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 HMGN3Q15651 99 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 AANATQ16613 207 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 ZNF385BQ569K4 471 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 ZMAT1Q5H9K5 638 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 FAM76BQ5HYJ3 339 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 LY6G5CQ5SRR4 150 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 OLFML2AQ68BL7 652 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 NIPAL3Q6P499 406 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 ULK3Q6PHR2 472 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 CD300LGQ6UXG3 332 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 VRK3Q8IV63 474 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 ZNF584Q8IVC4 421 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 CMIPQ8IY22 773 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 ACOT4Q8N9L9 421 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 CHST14Q8NCH0 376 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 DNAAF1Q8NEP3 725 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 OR6C4Q8NGE1 309 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 OR6T1Q8NGN1 323 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 ELP5Q8TE02 316 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 SMIM4Q8WVI0 70 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 HGDQ93099 445 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 CCDC120Q96HB5 630 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 C4orf36Q96KX1 117 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 SMIM14Q96QK8 99 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 STACQ99469 402 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 PHB2Q99623 299 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms