RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 FAM71CQ8NEG0 241 aa12.39□□□□□ -0.43
APOC1-208ENST00000592535 PNPT1Q8TCS8 783 aaKnown RBP12.39□□□□□ -0.43
APOC1-208ENST00000592535 RNF128Q8TEB7 428 aa12.39□□□□□ -0.43
APOC1-208ENST00000592535 OIT3Q8WWZ8 545 aa12.39□□□□□ -0.43
APOC1-208ENST00000592535 ST8SIA1Q92185 356 aa12.39□□□□□ -0.43
APOC1-208ENST00000592535 CPNE4Q96A23 557 aaPredicted RBP12.39□□□□□ -0.43
APOC1-208ENST00000592535 REXO5Q96IC2 774 aaKnown RBP12.39□□□□□ -0.43
APOC1-208ENST00000592535 FOXC2Q99958 501 aa12.39□□□□□ -0.43
APOC1-208ENST00000592535 MED18Q9BUE0 208 aa12.39□□□□□ -0.43
APOC1-208ENST00000592535 KLHL4Q9C0H6 718 aa12.39□□□□□ -0.43
APOC1-208ENST00000592535 CXXC4Q9H2H0 198 aa12.39□□□□□ -0.43
APOC1-208ENST00000592535 C12orf49Q9H741 205 aa12.39□□□□□ -0.43
APOC1-208ENST00000592535 TIGARQ9NQ88 270 aa12.39□□□□□ -0.43
APOC1-208ENST00000592535 SLC6A13Q9NSD5 602 aa12.39□□□□□ -0.43
APOC1-208ENST00000592535 ARGLU1Q9NWB6 273 aaPredicted RBP12.39□□□□□ -0.43
APOC1-208ENST00000592535 USH1CQ9Y6N9 552 aa12.39□□□□□ -0.43
APOC1-208ENST00000592535 CLDN24A6NM45 220 aa12.38□□□□□ -0.43
APOC1-208ENST00000592535 DEFB108AA8MXU0 73 aa12.38□□□□□ -0.43
APOC1-208ENST00000592535 RFXANKO14593 260 aa12.38□□□□□ -0.43
APOC1-208ENST00000592535 UBDO15205 165 aa12.38□□□□□ -0.43
APOC1-208ENST00000592535 DIAPH2O60879 1101 aa12.38□□□□□ -0.43
APOC1-208ENST00000592535 ATE1O95260 518 aa12.38□□□□□ -0.43
APOC1-208ENST00000592535 RAF1P04049 648 aa12.38□□□□□ -0.43
APOC1-208ENST00000592535 IL6P05231 212 aa12.38□□□□□ -0.43
APOC1-208ENST00000592535 CHRM4P08173 479 aa12.38□□□□□ -0.43
APOC1-208ENST00000592535 PABPC4LP0CB38 370 aaKnown RBP12.38□□□□□ -0.43
APOC1-208ENST00000592535 PGCP20142 388 aa12.38□□□□□ -0.43
APOC1-208ENST00000592535 SLC7A1P30825 629 aa12.38□□□□□ -0.43
APOC1-208ENST00000592535 GSTA3Q16772 222 aa12.38□□□□□ -0.43
APOC1-208ENST00000592535 TTMPQ5BVD1 217 aa12.38□□□□□ -0.43
APOC1-208ENST00000592535 GTF2IRD2BQ6EKJ0 949 aa12.38□□□□□ -0.43
APOC1-208ENST00000592535 C3orf33Q6P1S2 294 aa12.38□□□□□ -0.43
APOC1-208ENST00000592535 C22orf34Q6ZV56 151 aa12.38□□□□□ -0.43
APOC1-208ENST00000592535 PLEKHM3Q6ZWE6 761 aa12.38□□□□□ -0.43
APOC1-208ENST00000592535 FCRLAQ7L513 359 aa12.38□□□□□ -0.43
APOC1-208ENST00000592535 GTF2IRD2Q86UP8 949 aa12.38□□□□□ -0.43
APOC1-208ENST00000592535 OR9I1Q8NGQ6 314 aa12.38□□□□□ -0.43
APOC1-208ENST00000592535 ZC3HAV1LQ96H79 300 aaKnown RBP12.38□□□□□ -0.43
APOC1-208ENST00000592535 ATP6V1G3Q96LB4 118 aa12.38□□□□□ -0.43
APOC1-208ENST00000592535 TRNT1Q96Q11 434 aaKnown RBP12.38□□□□□ -0.43
APOC1-208ENST00000592535 SLC38A1Q9H2H9 487 aa12.38□□□□□ -0.43
APOC1-208ENST00000592535 SDR39U1Q9NRG7 319 aaPredicted RBP12.38□□□□□ -0.43
APOC1-208ENST00000592535 ZNF226Q9NYT6 803 aa12.38□□□□□ -0.43
APOC1-208ENST00000592535 ZIM2Q9NZV7 527 aa12.38□□□□□ -0.43
APOC1-208ENST00000592535 EDARQ9UNE0 448 aa12.38□□□□□ -0.43
APOC1-208ENST00000592535 SLC35A3Q9Y2D2 325 aa12.38□□□□□ -0.43
APOC1-208ENST00000592535 HIVEP1P15822 2718 aa12.38□□□□□ -0.43
APOC1-208ENST00000592535 CELSR1Q9NYQ6 3014 aa12.37□□□□□ -0.43
APOC1-208ENST00000592535 IGHV3-15A0A0B4J1V0 119 aa12.37□□□□□ -0.43
APOC1-208ENST00000592535 KLK2P20151 261 aa12.37□□□□□ -0.43
APOC1-208ENST00000592535 ENPP1P22413 925 aa12.37□□□□□ -0.43
APOC1-208ENST00000592535 CRYGSP22914 178 aa12.37□□□□□ -0.43
APOC1-208ENST00000592535 RYKP34925 604 aa12.37□□□□□ -0.43
APOC1-208ENST00000592535 ANXA11P50995 505 aaKnown RBP12.37□□□□□ -0.43
APOC1-208ENST00000592535 MVDP53602 400 aa12.37□□□□□ -0.43
APOC1-208ENST00000592535 KCNJ10P78508 379 aa12.37□□□□□ -0.43
APOC1-208ENST00000592535 MERTKQ12866 999 aa12.37□□□□□ -0.43
APOC1-208ENST00000592535 RNPS1Q15287 305 aaKnown RBP12.37□□□□□ -0.43
APOC1-208ENST00000592535 GTDC1Q4AE62 458 aa12.37□□□□□ -0.43
APOC1-208ENST00000592535 TMEM201Q5SNT2 666 aa12.37□□□□□ -0.43
APOC1-208ENST00000592535 EPGNQ6UW88 154 aa12.37□□□□□ -0.43
APOC1-208ENST00000592535 STAC2Q6ZMT1 411 aa12.37□□□□□ -0.43
APOC1-208ENST00000592535 NUFIP2Q7Z417 695 aaKnown RBP12.37□□□□□ -0.43
APOC1-208ENST00000592535 TUSC5Q8IXB3 177 aa12.37□□□□□ -0.43
APOC1-208ENST00000592535 ZNF563Q8TA94 476 aa12.37□□□□□ -0.43
APOC1-208ENST00000592535 TMEM234Q8WY98 164 aa12.37□□□□□ -0.43
APOC1-208ENST00000592535 PIK3IP1Q96FE7 263 aa12.37□□□□□ -0.43
APOC1-208ENST00000592535 C7orf26Q96N11 449 aa12.37□□□□□ -0.43
APOC1-208ENST00000592535 OR5B2Q96R09 309 aa12.37□□□□□ -0.43
APOC1-208ENST00000592535 SLCO1B3Q9NPD5 702 aa12.37□□□□□ -0.43
APOC1-208ENST00000592535 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.37□□□□□ -0.43
APOC1-208ENST00000592535 ACER3Q9NUN7 267 aa12.37□□□□□ -0.43
APOC1-208ENST00000592535 ZNF446Q9NWS9 450 aa12.37□□□□□ -0.43
APOC1-208ENST00000592535 KLHL13Q9P2N7 655 aa12.37□□□□□ -0.43
APOC1-208ENST00000592535 LIPT1Q9Y234 373 aa12.37□□□□□ -0.43
APOC1-208ENST00000592535 PRR14LQ5THK1 2151 aa12.36□□□□□ -0.43
APOC1-208ENST00000592535 AGAP5A6NIR3 686 aa12.36□□□□□ -0.43
APOC1-208ENST00000592535 SMAD9O15198 467 aaKnown RBP12.36□□□□□ -0.43
APOC1-208ENST00000592535 ADAM11O75078 769 aa12.36□□□□□ -0.43
APOC1-208ENST00000592535 PRKD3O94806 890 aa12.36□□□□□ -0.43
APOC1-208ENST00000592535 ANP32DO95626 131 aa12.36□□□□□ -0.43
APOC1-208ENST00000592535 KRT75O95678 551 aa12.36□□□□□ -0.43
APOC1-208ENST00000592535 THBDP07204 575 aa12.36□□□□□ -0.43
APOC1-208ENST00000592535 NR2F1P10589 423 aa12.36□□□□□ -0.43
APOC1-208ENST00000592535 POLR2JP52435 117 aaKnown RBP12.36□□□□□ -0.43
APOC1-208ENST00000592535 RAC3P60763 192 aa12.36□□□□□ -0.43
APOC1-208ENST00000592535 TXNL4AP83876 142 aaKnown RBP12.36□□□□□ -0.43
APOC1-208ENST00000592535 KEAP1Q14145 624 aa12.36□□□□□ -0.43
APOC1-208ENST00000592535 MAPK11Q15759 364 aa12.36□□□□□ -0.43
APOC1-208ENST00000592535 LRRC74BQ6ZQY2 392 aa12.36□□□□□ -0.43
APOC1-208ENST00000592535 BEND4Q6ZU67 534 aa12.36□□□□□ -0.43
APOC1-208ENST00000592535 STK32CQ86UX6 486 aa12.36□□□□□ -0.43
APOC1-208ENST00000592535 LSRQ86X29 649 aaPredicted RBP12.36□□□□□ -0.43
APOC1-208ENST00000592535 MIER2Q8N344 545 aa12.36□□□□□ -0.43
APOC1-208ENST00000592535 ARFGAP2Q8N6H7 521 aa12.36□□□□□ -0.43
APOC1-208ENST00000592535 LRRC8CQ8TDW0 803 aa12.36□□□□□ -0.43
APOC1-208ENST00000592535 CNOT9Q92600 299 aaKnown RBP12.36□□□□□ -0.43
APOC1-208ENST00000592535 VPS33AQ96AX1 596 aa12.36□□□□□ -0.43
APOC1-208ENST00000592535 MBD6Q96DN6 1003 aa12.36□□□□□ -0.43
APOC1-208ENST00000592535 EXOSC3Q9NQT5 275 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms