RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 EMC9Q9Y3B6 208 aa9.06□□□□□ -0.96
BRCA1-227ENST00000591849 SPIN1Q9Y657 262 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-227ENST00000591849 PKDREJQ9NTG1 2253 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 EXPH5Q8NEV8 1989 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 CFAP73A6NFT4 308 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 CLDN24A6NM45 220 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 SYT5O00445 386 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 NUDT7P0C024 238 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 NID1P14543 1247 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 CCNA2P20248 432 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 SLC6A2P23975 617 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 SSTR2P30874 369 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 PEX19P40855 299 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 APOBEC1P41238 236 aaKnown RBP9.05□□□□□ -0.96
BRCA1-227ENST00000591849 KIR2DL3P43628 341 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 HTR3AP46098 478 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 KCNJ5P48544 419 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 MVDP53602 400 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 CYLC2Q14093 348 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-227ENST00000591849 ZSWIM7Q19AV6 140 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 ZNF311Q5JNZ3 666 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 RPS26P11Q5JNZ5 115 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-227ENST00000591849 MRPL2Q5T653 305 aaKnown RBP9.05□□□□□ -0.96
BRCA1-227ENST00000591849 ZNF550Q7Z398 422 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 GGNQ86UU5 652 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 VRK2Q86Y07 508 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 DMRTC2Q8IXT2 367 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-227ENST00000591849 RELL2Q8NC24 303 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-227ENST00000591849 NFKBIDQ8NI38 313 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 BBS10Q8TAM1 723 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 TREX2Q9BQ50 279 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-227ENST00000591849 ZNF559Q9BR84 538 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 SPATA5L1Q9BVQ7 753 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 NSRP1Q9H0G5 558 aaKnown RBP9.05□□□□□ -0.96
BRCA1-227ENST00000591849 ENKD1Q9H0I2 346 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 CCDC134Q9H6E4 229 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 A4GALTQ9NPC4 353 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 EXOSC3Q9NQT5 275 aaKnown RBP9.05□□□□□ -0.96
BRCA1-227ENST00000591849 SLC25A37Q9NYZ2 338 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 VAPAQ9P0L0 249 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 SLAMF8Q9P0V8 285 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 KLHL14Q9P2G3 628 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 PACSIN3Q9UKS6 424 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 APCP25054 2843 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 NCKAP5O14513 1909 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 MED12Q93074 2177 aa9.05□□□□□ -0.96
BRCA1-227ENST00000591849 CACNA1CQ13936 2221 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 FREM3P0C091 2139 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 LOC100653049A0A140TA62 436 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 A0A1W2PNV4 684 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 ADAMDEC1O15204 470 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 KRT34O76011 436 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 AQP8O94778 261 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 IL11P20809 199 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 PSMA4P25789 261 aaKnown RBP9.04□□□□□ -0.96
BRCA1-227ENST00000591849 FKBP2P26885 142 aaKnown RBP9.04□□□□□ -0.96
BRCA1-227ENST00000591849 CPOXP36551 454 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 CDK6Q00534 326 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 TFF3Q07654 80 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 KLF10Q13118 480 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 SCARB2Q14108 478 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 CYP51A1Q16850 503 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 SLC25A53Q5H9E4 307 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 PRAMEF8Q5VWM4 474 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 PRAMEF7Q5VXH5 474 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 AP1ARQ63HQ0 302 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 REEP3Q6NUK4 255 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 C3orf33Q6P1S2 294 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 PLEKHM3Q6ZWE6 761 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 GRINAQ7Z429 371 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 CPLX4Q7Z7G2 160 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 CADM2Q8N3J6 435 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 SLC25A43Q8WUT9 341 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-227ENST00000591849 ROBO4Q8WZ75 1007 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 MAL2Q969L2 176 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 CPNE4Q96A23 557 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-227ENST00000591849 ZHX1-C8orf76Q96EF9 292 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 ZNF607Q96SK3 696 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 CGREF1Q99674 301 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 SH3GL1Q99961 368 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 SLC39A3Q9BRY0 314 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 SPATA9Q9BWV2 254 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 TRIM8Q9BZR9 551 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 FAM107BQ9H098 131 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 RNF122Q9H9V4 155 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 FANCFQ9NPI8 374 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 SLC52A3Q9NQ40 469 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 NPDC1Q9NQX5 325 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-227ENST00000591849 CTPS2Q9NRF8 586 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 GLRX2Q9NS18 164 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 RLIMQ9NVW2 624 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 GID8Q9NWU2 228 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 DNAJB12Q9NXW2 375 aaKnown RBP9.04□□□□□ -0.96
BRCA1-227ENST00000591849 RPS6KB2Q9UBS0 482 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 CLEC4AQ9UMR7 237 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 PROCRQ9UNN8 238 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 ANGPT4Q9Y264 503 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 ZNF443Q9Y2A4 671 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-227ENST00000591849 CAPN7Q9Y6W3 813 aa9.04□□□□□ -0.96
BRCA1-227ENST00000591849 C2CD3Q4AC94 2353 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms