RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 MRGPRX4Q96LA9 322 aa14□□□□□ -0.17
DDX39A-216ENST00000591275 TSSK3Q96PN8 268 aa14□□□□□ -0.17
DDX39A-216ENST00000591275 OR5B2Q96R09 309 aa14□□□□□ -0.17
DDX39A-216ENST00000591275 REEP4Q9H6H4 257 aa14□□□□□ -0.17
DDX39A-216ENST00000591275 CCL27Q9Y4X3 112 aa14□□□□□ -0.17
DDX39A-216ENST00000591275 ACTL7BQ9Y614 415 aa14□□□□□ -0.17
DDX39A-216ENST00000591275 SLC25A15Q9Y619 301 aa14□□□□□ -0.17
DDX39A-216ENST00000591275 ARFGEF3Q5TH69 2177 aa14□□□□□ -0.17
DDX39A-216ENST00000591275 A0A087WUV0 522 aaPredicted RBP13.99□□□□□ -0.17
DDX39A-216ENST00000591275 EXOC1LA0A1B0GW35 172 aa13.99□□□□□ -0.17
DDX39A-216ENST00000591275 ZNF724A8MTY0 619 aa13.99□□□□□ -0.17
DDX39A-216ENST00000591275 NPIPB8E9PQR5 432 aa13.99□□□□□ -0.17
DDX39A-216ENST00000591275 H3BNH8 94 aa13.99□□□□□ -0.17
DDX39A-216ENST00000591275 HMGN2P05204 90 aaKnown RBP13.99□□□□□ -0.17
DDX39A-216ENST00000591275 GSTA1P08263 222 aa13.99□□□□□ -0.17
DDX39A-216ENST00000591275 FRKP42685 505 aaPredicted RBP13.99□□□□□ -0.17
DDX39A-216ENST00000591275 CCR4P51679 360 aa13.99□□□□□ -0.17
DDX39A-216ENST00000591275 EFNA4P52798 201 aa13.99□□□□□ -0.17
DDX39A-216ENST00000591275 SUMO3P55854 103 aaPredicted RBP13.99□□□□□ -0.17
DDX39A-216ENST00000591275 VSNL1P62760 191 aa13.99□□□□□ -0.17
DDX39A-216ENST00000591275 LASP1Q14847 261 aaKnown RBP13.99□□□□□ -0.17
DDX39A-216ENST00000591275 QPRTQ15274 297 aa13.99□□□□□ -0.17
DDX39A-216ENST00000591275 EXOSC6Q5RKV6 272 aaKnown RBP13.99□□□□□ -0.17
DDX39A-216ENST00000591275 EMBQ6PCB8 327 aa13.99□□□□□ -0.17
DDX39A-216ENST00000591275 ZCCHC12Q6PEW1 402 aa13.99□□□□□ -0.17
DDX39A-216ENST00000591275 TIFABQ6ZNK6 161 aa13.99□□□□□ -0.17
DDX39A-216ENST00000591275 SSX8Q7RTT4 187 aa13.99□□□□□ -0.17
DDX39A-216ENST00000591275 DEPDC4Q8N2C3 294 aa13.99□□□□□ -0.17
DDX39A-216ENST00000591275 ZNF527Q8NB42 609 aa13.99□□□□□ -0.17
DDX39A-216ENST00000591275 MSI2Q96DH6 328 aaKnown RBP13.99□□□□□ -0.17
DDX39A-216ENST00000591275 FAM120BQ96EK7 910 aaKnown RBP13.99□□□□□ -0.17
DDX39A-216ENST00000591275 QRSL1Q9H0R6 528 aaKnown RBP13.99□□□□□ -0.17
DDX39A-216ENST00000591275 EML4Q9HC35 981 aaKnown RBP13.99□□□□□ -0.17
DDX39A-216ENST00000591275 ACSS1Q9NUB1 689 aaPredicted RBP13.99□□□□□ -0.17
DDX39A-216ENST00000591275 ZCCHC3Q9NUD5 404 aaKnown RBP13.99□□□□□ -0.17
DDX39A-216ENST00000591275 ZNF446Q9NWS9 450 aa13.99□□□□□ -0.17
DDX39A-216ENST00000591275 BAIAP2L1Q9UHR4 511 aa13.99□□□□□ -0.17
DDX39A-216ENST00000591275 TRAF6Q9Y4K3 522 aa13.99□□□□□ -0.17
DDX39A-216ENST00000591275 ATP23Q9Y6H3 246 aa13.99□□□□□ -0.17
DDX39A-216ENST00000591275 NUP214P35658 2090 aaPredicted RBP13.99□□□□□ -0.17
DDX39A-216ENST00000591275 HSPA4LO95757 839 aa13.98□□□□□ -0.17
DDX39A-216ENST00000591275 CSF3P09919 207 aa13.98□□□□□ -0.17
DDX39A-216ENST00000591275 SDC1P18827 310 aa13.98□□□□□ -0.17
DDX39A-216ENST00000591275 GCAP28676 217 aa13.98□□□□□ -0.17
DDX39A-216ENST00000591275 FBXW9Q5XUX1 488 aa13.98□□□□□ -0.17
DDX39A-216ENST00000591275 CLEC6AQ6EIG7 209 aa13.98□□□□□ -0.17
DDX39A-216ENST00000591275 ZNF544Q6NX49 715 aa13.98□□□□□ -0.17
DDX39A-216ENST00000591275 IFT81Q8WYA0 676 aa13.98□□□□□ -0.17
DDX39A-216ENST00000591275 ZNF764Q96H86 408 aaPredicted RBP13.98□□□□□ -0.17
DDX39A-216ENST00000591275 FMO2Q99518 471 aa13.98□□□□□ -0.17
DDX39A-216ENST00000591275 INPP5KQ9BT40 448 aa13.98□□□□□ -0.17
DDX39A-216ENST00000591275 PRR14Q9BWN1 585 aa13.98□□□□□ -0.17
DDX39A-216ENST00000591275 PIGUQ9H490 435 aa13.98□□□□□ -0.17
DDX39A-216ENST00000591275 DUSP22Q9NRW4 184 aa13.98□□□□□ -0.17
DDX39A-216ENST00000591275 SIRT3Q9NTG7 399 aaPredicted RBP13.98□□□□□ -0.17
DDX39A-216ENST00000591275 C1orf109Q9NX04 203 aa13.98□□□□□ -0.17
DDX39A-216ENST00000591275 KCNE3Q9Y6H6 103 aa13.98□□□□□ -0.17
DDX39A-216ENST00000591275 KIAA0513O60268 411 aa13.97□□□□□ -0.17
DDX39A-216ENST00000591275 TBX19O60806 448 aa13.97□□□□□ -0.17
DDX39A-216ENST00000591275 DIO1P49895 249 aa13.97□□□□□ -0.17
DDX39A-216ENST00000591275 FOXG1P55316 489 aaPredicted RBP13.97□□□□□ -0.17
DDX39A-216ENST00000591275 CHRNB3Q05901 458 aa13.97□□□□□ -0.17
DDX39A-216ENST00000591275 PDE7AQ13946 482 aa13.97□□□□□ -0.17
DDX39A-216ENST00000591275 TIGD2Q4W5G0 525 aa13.97□□□□□ -0.17
DDX39A-216ENST00000591275 SLC25A53Q5H9E4 307 aa13.97□□□□□ -0.17
DDX39A-216ENST00000591275 DCST2Q5T1A1 773 aa13.97□□□□□ -0.17
DDX39A-216ENST00000591275 C3orf33Q6P1S2 294 aa13.97□□□□□ -0.17
DDX39A-216ENST00000591275 FRMD7Q6ZUT3 714 aa13.97□□□□□ -0.17
DDX39A-216ENST00000591275 LCA5Q86VQ0 697 aa13.97□□□□□ -0.17
DDX39A-216ENST00000591275 APH1AQ96BI3 265 aa13.97□□□□□ -0.17
DDX39A-216ENST00000591275 DNAJA3Q96EY1 480 aa13.97□□□□□ -0.17
DDX39A-216ENST00000591275 STACQ99469 402 aa13.97□□□□□ -0.17
DDX39A-216ENST00000591275 CCT7Q99832 543 aa13.97□□□□□ -0.17
DDX39A-216ENST00000591275 HOXD1Q9GZZ0 328 aa13.97□□□□□ -0.17
DDX39A-216ENST00000591275 DTNAQ9Y4J8 743 aa13.97□□□□□ -0.17
DDX39A-216ENST00000591275 PMF1-BGLAPU3KQ54 211 aa13.97□□□□□ -0.17
DDX39A-216ENST00000591275 VWC2LB2RUY7 222 aa13.96□□□□□ -0.17
DDX39A-216ENST00000591275 G3V2L1 256 aa13.96□□□□□ -0.17
DDX39A-216ENST00000591275 MYL2P10916 166 aa13.96□□□□□ -0.17
DDX39A-216ENST00000591275 BMP4P12644 408 aa13.96□□□□□ -0.17
DDX39A-216ENST00000591275 APEHP13798 732 aaKnown RBP13.96□□□□□ -0.17
DDX39A-216ENST00000591275 HNF1AP20823 631 aa13.96□□□□□ -0.17
DDX39A-216ENST00000591275 PRPH2P23942 346 aa13.96□□□□□ -0.17
DDX39A-216ENST00000591275 PDLIM4P50479 330 aa13.96□□□□□ -0.17
DDX39A-216ENST00000591275 ATP12AP54707 1039 aa13.96□□□□□ -0.17
DDX39A-216ENST00000591275 RPL38P63173 70 aaKnown RBP13.96□□□□□ -0.17
DDX39A-216ENST00000591275 RUNX1T1Q06455 604 aa13.96□□□□□ -0.17
DDX39A-216ENST00000591275 TP53BP2Q13625 1128 aa13.96□□□□□ -0.17
DDX39A-216ENST00000591275 CARTPTQ16568 116 aa13.96□□□□□ -0.17
DDX39A-216ENST00000591275 C9orf135Q5VTT2 229 aa13.96□□□□□ -0.17
DDX39A-216ENST00000591275 LIPNQ5VXI9 398 aa13.96□□□□□ -0.17
DDX39A-216ENST00000591275 TOR1AIP2Q8NFQ8 470 aa13.96□□□□□ -0.17
DDX39A-216ENST00000591275 OR2T11Q8NH01 316 aa13.96□□□□□ -0.17
DDX39A-216ENST00000591275 OR5W2Q8NH69 310 aa13.96□□□□□ -0.17
DDX39A-216ENST00000591275 AENQ8WTP8 325 aaKnown RBP13.96□□□□□ -0.17
DDX39A-216ENST00000591275 C1orf159Q96HA4 380 aa13.96□□□□□ -0.17
DDX39A-216ENST00000591275 PIMREGQ9BSJ6 248 aa13.96□□□□□ -0.17
DDX39A-216ENST00000591275 THUMPD3Q9BV44 507 aaKnown RBP13.96□□□□□ -0.17
DDX39A-216ENST00000591275 ASB6Q9NWX5 421 aa13.96□□□□□ -0.17
DDX39A-216ENST00000591275 EMC3Q9P0I2 261 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms