RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 MERTKQ12866 999 aa17.3■□□□□ 0.36
DDX39A-214ENST00000590556 EIF2S3LQ2VIR3 472 aaKnown RBP17.3■□□□□ 0.36
DDX39A-214ENST00000590556 DNAL1Q4LDG9 190 aa17.3■□□□□ 0.36
DDX39A-214ENST00000590556 DCST1Q5T197 706 aa17.3■□□□□ 0.36
DDX39A-214ENST00000590556 Q6ZPB1 254 aaPredicted RBP17.3■□□□□ 0.36
DDX39A-214ENST00000590556 PRR7Q8TB68 274 aa17.3■□□□□ 0.36
DDX39A-214ENST00000590556 PROX1Q92786 737 aa17.3■□□□□ 0.36
DDX39A-214ENST00000590556 SLC7A6OSQ96CW6 309 aaPredicted RBP17.3■□□□□ 0.36
DDX39A-214ENST00000590556 BTBD10Q9BSF8 475 aa17.3■□□□□ 0.36
DDX39A-214ENST00000590556 ADPRHL2Q9NX46 363 aa17.3■□□□□ 0.36
DDX39A-214ENST00000590556 STOML1Q9UBI4 398 aa17.3■□□□□ 0.36
DDX39A-214ENST00000590556 CAMK2AQ9UQM7 478 aa17.3■□□□□ 0.36
DDX39A-214ENST00000590556 J3QKU1 62 aa17.29■□□□□ 0.36
DDX39A-214ENST00000590556 WISP1O95388 367 aa17.29■□□□□ 0.36
DDX39A-214ENST00000590556 NTN1O95631 604 aa17.29■□□□□ 0.36
DDX39A-214ENST00000590556 PEPDP12955 493 aa17.29■□□□□ 0.36
DDX39A-214ENST00000590556 SLC1A3P43003 542 aa17.29■□□□□ 0.36
DDX39A-214ENST00000590556 LHX2P50458 406 aa17.29■□□□□ 0.36
DDX39A-214ENST00000590556 RASSF2P50749 326 aa17.29■□□□□ 0.36
DDX39A-214ENST00000590556 NRF1Q16656 503 aa17.29■□□□□ 0.36
DDX39A-214ENST00000590556 PLEKHM3Q6ZWE6 761 aa17.29■□□□□ 0.36
DDX39A-214ENST00000590556 CD163Q86VB7 1156 aa17.29■□□□□ 0.36
DDX39A-214ENST00000590556 PM20D2Q8IYS1 436 aa17.29■□□□□ 0.36
DDX39A-214ENST00000590556 CADM2Q8N3J6 435 aa17.29■□□□□ 0.36
DDX39A-214ENST00000590556 LZICQ8WZA0 190 aa17.29■□□□□ 0.36
DDX39A-214ENST00000590556 WDYHV1Q96HA8 205 aa17.29■□□□□ 0.36
DDX39A-214ENST00000590556 TPD52L3Q96J77 140 aa17.29■□□□□ 0.36
DDX39A-214ENST00000590556 ARHGDIGQ99819 225 aa17.29■□□□□ 0.36
DDX39A-214ENST00000590556 THTPAQ9BU02 230 aa17.29■□□□□ 0.36
DDX39A-214ENST00000590556 PNPLA3Q9NST1 481 aa17.29■□□□□ 0.36
DDX39A-214ENST00000590556 ALKBH4Q9NXW9 302 aa17.29■□□□□ 0.36
DDX39A-214ENST00000590556 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.29■□□□□ 0.36
DDX39A-214ENST00000590556 MAGEL2Q9UJ55 1249 aa17.29■□□□□ 0.36
DDX39A-214ENST00000590556 AP4B1Q9Y6B7 739 aa17.29■□□□□ 0.36
DDX39A-214ENST00000590556 TRGV8A0A0C4DH27 118 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 M0R3H8 397 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 EBAG9O00559 213 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 ZNF682O95780 498 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 SERPINA1P01009 418 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 STSP08842 583 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 CPN1P15169 458 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 ME2P23368 584 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 ELK4P28324 431 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 APOBEC1P41238 236 aaKnown RBP17.28■□□□□ 0.36
DDX39A-214ENST00000590556 HTR3AP46098 478 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 ZNF136P52737 540 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 DLX5P56178 289 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 NCALDP61601 193 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 RAC1P63000 192 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 SELENOWP63302 87 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 SRYQ05066 204 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 BNIP2Q12982 314 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 BCL2A1Q16548 175 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 C3AR1Q16581 482 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 FXNQ16595 210 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 EMC4Q5J8M3 183 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 WBP2NLQ6ICG8 309 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 ZNF585AQ6P3V2 769 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 CCDC121Q6ZUS5 278 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 GRINAQ7Z429 371 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 RANBP3LQ86VV4 465 aaPredicted RBP17.28■□□□□ 0.36
DDX39A-214ENST00000590556 DOLPP1Q86YN1 238 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 OR52E4Q8NGH9 312 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 OR10Q1Q8NGQ4 319 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 VANGL1Q8TAA9 524 aaPredicted RBP17.28■□□□□ 0.36
DDX39A-214ENST00000590556 SMPDL3BQ92485 455 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 WFDC6Q9BQY6 131 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 ZNF559Q9BR84 538 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 PRDM14Q9GZV8 571 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 PCDHAC1Q9H158 963 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 SH3BGRL2Q9UJC5 107 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 TINAGQ9UJW2 476 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 SLC9A8Q9Y2E8 581 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 SH3GLB1Q9Y371 365 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 SNX13Q9Y5W8 968 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 MYO18BQ8IUG5 2567 aa17.28■□□□□ 0.36
DDX39A-214ENST00000590556 ARPC2O15144 300 aa17.27■□□□□ 0.36
DDX39A-214ENST00000590556 EFNA2O43921 213 aa17.27■□□□□ 0.36
DDX39A-214ENST00000590556 PDE5AO76074 875 aa17.27■□□□□ 0.36
DDX39A-214ENST00000590556 ZNF708P17019 499 aa17.27■□□□□ 0.36
DDX39A-214ENST00000590556 IL11P20809 199 aa17.27■□□□□ 0.36
DDX39A-214ENST00000590556 CLDN18P56856 261 aa17.27■□□□□ 0.36
DDX39A-214ENST00000590556 POMZP3Q6PJE2 187 aa17.27■□□□□ 0.36
DDX39A-214ENST00000590556 UBQLNLQ8IYU4 475 aa17.27■□□□□ 0.36
DDX39A-214ENST00000590556 LILRA2Q8N149 483 aa17.27■□□□□ 0.36
DDX39A-214ENST00000590556 MEIOBQ8N635 442 aa17.27■□□□□ 0.36
DDX39A-214ENST00000590556 ATP6V1C2Q8NEY4 427 aa17.27■□□□□ 0.36
DDX39A-214ENST00000590556 CLPTM1LQ96KA5 538 aa17.27■□□□□ 0.36
DDX39A-214ENST00000590556 TRIM2Q9C040 744 aa17.27■□□□□ 0.36
DDX39A-214ENST00000590556 TP63Q9H3D4 680 aaPredicted RBP17.27■□□□□ 0.36
DDX39A-214ENST00000590556 TMEM185BQ9H7F4 350 aa17.27■□□□□ 0.36
DDX39A-214ENST00000590556 GORASP2Q9H8Y8 452 aa17.27■□□□□ 0.36
DDX39A-214ENST00000590556 CTPS2Q9NRF8 586 aa17.27■□□□□ 0.36
DDX39A-214ENST00000590556 SERINC1Q9NRX5 453 aa17.27■□□□□ 0.36
DDX39A-214ENST00000590556 RPS6KB2Q9UBS0 482 aa17.27■□□□□ 0.36
DDX39A-214ENST00000590556 TESQ9UGI8 421 aaKnown RBP17.27■□□□□ 0.36
DDX39A-214ENST00000590556 RPS6KA6Q9UK32 745 aa17.27■□□□□ 0.36
DDX39A-214ENST00000590556 FIGNL2A6NMB9 653 aa17.26■□□□□ 0.35
DDX39A-214ENST00000590556 TMEM229AB2RXF0 380 aa17.26■□□□□ 0.35
DDX39A-214ENST00000590556 H0Y3Z8 333 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms