RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 C12orf10Q9HB07 376 aa13.79□□□□□ -0.2
DDX39A-211ENST00000590239 KLHL1Q9NR64 748 aa13.79□□□□□ -0.2
DDX39A-211ENST00000590239 TUBA8Q9NY65 449 aaPredicted RBP13.79□□□□□ -0.2
DDX39A-211ENST00000590239 SELENONQ9NZV5 590 aa13.79□□□□□ -0.2
DDX39A-211ENST00000590239 RHCGQ9UBD6 479 aa13.79□□□□□ -0.2
DDX39A-211ENST00000590239 NKX1-2Q9UD57 310 aaPredicted RBP13.79□□□□□ -0.2
DDX39A-211ENST00000590239 TUBD1Q9UJT1 453 aa13.79□□□□□ -0.2
DDX39A-211ENST00000590239 C15orf41Q9Y2V0 281 aa13.79□□□□□ -0.2
DDX39A-211ENST00000590239 SAMHD1Q9Y3Z3 626 aaKnown RBP13.79□□□□□ -0.2
DDX39A-211ENST00000590239 CNTRLQ7Z7A1 2325 aa13.79□□□□□ -0.2
DDX39A-211ENST00000590239 NAV2Q8IVL1 2488 aa13.79□□□□□ -0.2
DDX39A-211ENST00000590239 LRRC3CA6NJW4 275 aa13.78□□□□□ -0.2
DDX39A-211ENST00000590239 TNFRSF11BO00300 401 aa13.78□□□□□ -0.2
DDX39A-211ENST00000590239 CHP2O43745 196 aa13.78□□□□□ -0.2
DDX39A-211ENST00000590239 GMFGO60234 142 aa13.78□□□□□ -0.2
DDX39A-211ENST00000590239 CDC40O60508 579 aaKnown RBP eCLIP13.78□□□□□ -0.2
DDX39A-211ENST00000590239 LYPD3O95274 346 aa13.78□□□□□ -0.2
DDX39A-211ENST00000590239 MST1P26927 711 aa13.78□□□□□ -0.2
DDX39A-211ENST00000590239 DNAJA1P31689 397 aaKnown RBP13.78□□□□□ -0.2
DDX39A-211ENST00000590239 HTR3AP46098 478 aa13.78□□□□□ -0.2
DDX39A-211ENST00000590239 LIMS1P48059 325 aa13.78□□□□□ -0.2
DDX39A-211ENST00000590239 CDH12P55289 794 aa13.78□□□□□ -0.2
DDX39A-211ENST00000590239 DSCR4P56555 118 aaPredicted RBP13.78□□□□□ -0.2
DDX39A-211ENST00000590239 SESN3P58005 492 aa13.78□□□□□ -0.2
DDX39A-211ENST00000590239 GPR85P60893 370 aa13.78□□□□□ -0.2
DDX39A-211ENST00000590239 HYAL4Q2M3T9 481 aa13.78□□□□□ -0.2
DDX39A-211ENST00000590239 SLC25A53Q5H9E4 307 aa13.78□□□□□ -0.2
DDX39A-211ENST00000590239 GALNTL5Q7Z4T8 443 aa13.78□□□□□ -0.2
DDX39A-211ENST00000590239 OR4C15Q8NGM1 316 aa13.78□□□□□ -0.2
DDX39A-211ENST00000590239 NRBF2Q96F24 287 aa13.78□□□□□ -0.2
DDX39A-211ENST00000590239 MPP4Q96JB8 637 aa13.78□□□□□ -0.2
DDX39A-211ENST00000590239 JSRP1Q96MG2 331 aaPredicted RBP13.78□□□□□ -0.2
DDX39A-211ENST00000590239 GNRHR2Q96P88 292 aa13.78□□□□□ -0.2
DDX39A-211ENST00000590239 KLHDC3Q9BQ90 382 aa13.78□□□□□ -0.2
DDX39A-211ENST00000590239 HES7Q9BYE0 225 aa13.78□□□□□ -0.2
DDX39A-211ENST00000590239 ADAM19Q9H013 955 aa13.78□□□□□ -0.2
DDX39A-211ENST00000590239 ADNPQ9H2P0 1102 aa13.78□□□□□ -0.2
DDX39A-211ENST00000590239 PRORYQ9H606 182 aa13.78□□□□□ -0.2
DDX39A-211ENST00000590239 CTPS2Q9NRF8 586 aa13.78□□□□□ -0.2
DDX39A-211ENST00000590239 MAN2C1Q9NTJ4 1040 aa13.78□□□□□ -0.2
DDX39A-211ENST00000590239 MED17Q9NVC6 651 aa13.78□□□□□ -0.2
DDX39A-211ENST00000590239 VNN3Q9NY84 501 aa13.78□□□□□ -0.2
DDX39A-211ENST00000590239 TAS2R10Q9NYW0 307 aa13.78□□□□□ -0.2
DDX39A-211ENST00000590239 FBXL2Q9UKC9 423 aa13.78□□□□□ -0.2
DDX39A-211ENST00000590239 MRPS18CQ9Y3D5 142 aaKnown RBP13.78□□□□□ -0.2
DDX39A-211ENST00000590239 LYVE1Q9Y5Y7 322 aa13.78□□□□□ -0.2
DDX39A-211ENST00000590239 HELZ2Q9BYK8 2649 aaKnown RBP13.78□□□□□ -0.2
DDX39A-211ENST00000590239 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.77□□□□□ -0.21
DDX39A-211ENST00000590239 C7orf72A4D263 438 aa13.77□□□□□ -0.21
DDX39A-211ENST00000590239 PINLYPA6NC86 204 aa13.77□□□□□ -0.21
DDX39A-211ENST00000590239 CASQ2O14958 399 aaPredicted RBP13.77□□□□□ -0.21
DDX39A-211ENST00000590239 E2F6O75461 281 aa13.77□□□□□ -0.21
DDX39A-211ENST00000590239 THY1P04216 161 aa13.77□□□□□ -0.21
DDX39A-211ENST00000590239 PNMTP11086 282 aa13.77□□□□□ -0.21
DDX39A-211ENST00000590239 PRKCAP17252 672 aa13.77□□□□□ -0.21
DDX39A-211ENST00000590239 FPR1P21462 350 aa13.77□□□□□ -0.21
DDX39A-211ENST00000590239 EIF1P41567 113 aaKnown RBP13.77□□□□□ -0.21
DDX39A-211ENST00000590239 CD97P48960 835 aa13.77□□□□□ -0.21
DDX39A-211ENST00000590239 KCNAB2Q13303 367 aa13.77□□□□□ -0.21
DDX39A-211ENST00000590239 TOMM34Q15785 309 aaPredicted RBP13.77□□□□□ -0.21
DDX39A-211ENST00000590239 PLPPR5Q32ZL2 321 aa13.77□□□□□ -0.21
DDX39A-211ENST00000590239 GLYR1Q49A26 553 aaPredicted RBP13.77□□□□□ -0.21
DDX39A-211ENST00000590239 ALG10BQ5I7T1 473 aa13.77□□□□□ -0.21
DDX39A-211ENST00000590239 FBXW10Q5XX13 1052 aa13.77□□□□□ -0.21
DDX39A-211ENST00000590239 SHQ1Q6PI26 577 aaKnown RBP13.77□□□□□ -0.21
DDX39A-211ENST00000590239 ARSKQ6UWY0 536 aa13.77□□□□□ -0.21
DDX39A-211ENST00000590239 Q6ZS92 163 aa13.77□□□□□ -0.21
DDX39A-211ENST00000590239 GRINAQ7Z429 371 aa13.77□□□□□ -0.21
DDX39A-211ENST00000590239 SVOPLQ8N434 492 aa13.77□□□□□ -0.21
DDX39A-211ENST00000590239 ZFP62Q8NB50 900 aaPredicted RBP13.77□□□□□ -0.21
DDX39A-211ENST00000590239 SLC38A4Q969I6 547 aa13.77□□□□□ -0.21
DDX39A-211ENST00000590239 ZBTB8AQ96BR9 441 aa13.77□□□□□ -0.21
DDX39A-211ENST00000590239 C3orf49Q96BT1 292 aa13.77□□□□□ -0.21
DDX39A-211ENST00000590239 ZNF524Q96C55 264 aa13.77□□□□□ -0.21
DDX39A-211ENST00000590239 ABHD17AQ96GS6 310 aa13.77□□□□□ -0.21
DDX39A-211ENST00000590239 MRGPRX4Q96LA9 322 aa13.77□□□□□ -0.21
DDX39A-211ENST00000590239 FUZQ9BT04 418 aa13.77□□□□□ -0.21
DDX39A-211ENST00000590239 SEMA6AQ9H2E6 1030 aa13.77□□□□□ -0.21
DDX39A-211ENST00000590239 STOML1Q9UBI4 398 aa13.77□□□□□ -0.21
DDX39A-211ENST00000590239 B4GALT7Q9UBV7 327 aa13.77□□□□□ -0.21
DDX39A-211ENST00000590239 TMCC3Q9ULS5 477 aa13.77□□□□□ -0.21
DDX39A-211ENST00000590239 SLC7A7Q9UM01 511 aa13.77□□□□□ -0.21
DDX39A-211ENST00000590239 CSAG2Q9Y5P2 127 aa13.77□□□□□ -0.21
DDX39A-211ENST00000590239 HEATR5AQ86XA9 2040 aa13.76□□□□□ -0.21
DDX39A-211ENST00000590239 GLSO94925 669 aaPredicted RBP13.76□□□□□ -0.21
DDX39A-211ENST00000590239 NTN1O95631 604 aa13.76□□□□□ -0.21
DDX39A-211ENST00000590239 PDGFAP04085 211 aa13.76□□□□□ -0.21
DDX39A-211ENST00000590239 DPP4P27487 766 aa13.76□□□□□ -0.21
DDX39A-211ENST00000590239 ADH6P28332 368 aa13.76□□□□□ -0.21
DDX39A-211ENST00000590239 SRD5A2P31213 254 aa13.76□□□□□ -0.21
DDX39A-211ENST00000590239 RBM34P42696 430 aaKnown RBP13.76□□□□□ -0.21
DDX39A-211ENST00000590239 MEOX1P50221 254 aa13.76□□□□□ -0.21
DDX39A-211ENST00000590239 POLR2HP52434 150 aaKnown RBP13.76□□□□□ -0.21
DDX39A-211ENST00000590239 ARHGDIAP52565 204 aa13.76□□□□□ -0.21
DDX39A-211ENST00000590239 ZNF169Q14929 603 aaPredicted RBP13.76□□□□□ -0.21
DDX39A-211ENST00000590239 LINC00303Q3SY05 128 aa13.76□□□□□ -0.21
DDX39A-211ENST00000590239 FGD3Q5JSP0 725 aa13.76□□□□□ -0.21
DDX39A-211ENST00000590239 LINC00114Q6XXX2 140 aa13.76□□□□□ -0.21
DDX39A-211ENST00000590239 ATG4DQ86TL0 474 aaPredicted RBP13.76□□□□□ -0.21
DDX39A-211ENST00000590239 HIPK1Q86Z02 1210 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms