RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 KLF4O43474 513 aa12.8□□□□□ -0.36
MBD1-220ENST00000589758 CPSF4O95639 269 aaKnown RBP12.8□□□□□ -0.36
MBD1-220ENST00000589758 THBDP07204 575 aa12.8□□□□□ -0.36
MBD1-220ENST00000589758 GUSBP08236 651 aa12.8□□□□□ -0.36
MBD1-220ENST00000589758 HOXB4P17483 251 aaPredicted RBP12.8□□□□□ -0.36
MBD1-220ENST00000589758 SHC1P29353 583 aa12.8□□□□□ -0.36
MBD1-220ENST00000589758 ADSLP30566 484 aaPredicted RBP12.8□□□□□ -0.36
MBD1-220ENST00000589758 SLC7A1P30825 629 aa12.8□□□□□ -0.36
MBD1-220ENST00000589758 S100A3P33764 101 aa12.8□□□□□ -0.36
MBD1-220ENST00000589758 CLNS1AP54105 237 aaKnown RBP12.8□□□□□ -0.36
MBD1-220ENST00000589758 GUCY1A3Q02108 690 aa12.8□□□□□ -0.36
MBD1-220ENST00000589758 GPR68Q15743 365 aa12.8□□□□□ -0.36
MBD1-220ENST00000589758 TOMM34Q15785 309 aaPredicted RBP12.8□□□□□ -0.36
MBD1-220ENST00000589758 ZNF141Q15928 474 aa12.8□□□□□ -0.36
MBD1-220ENST00000589758 DPY19L1Q2PZI1 675 aa12.8□□□□□ -0.36
MBD1-220ENST00000589758 ARHGAP11BQ3KRB8 267 aa12.8□□□□□ -0.36
MBD1-220ENST00000589758 FAM174BQ3ZCQ3 159 aa12.8□□□□□ -0.36
MBD1-220ENST00000589758 SPANXN4Q5MJ08 99 aa12.8□□□□□ -0.36
MBD1-220ENST00000589758 Q5PR19 223 aa12.8□□□□□ -0.36
MBD1-220ENST00000589758 PDZK1Q5T2W1 519 aa12.8□□□□□ -0.36
MBD1-220ENST00000589758 PLEKHM3Q6ZWE6 761 aa12.8□□□□□ -0.36
MBD1-220ENST00000589758 FCRLAQ7L513 359 aa12.8□□□□□ -0.36
MBD1-220ENST00000589758 ANKRD46Q86W74 232 aa12.8□□□□□ -0.36
MBD1-220ENST00000589758 STEAP2Q8NFT2 490 aa12.8□□□□□ -0.36
MBD1-220ENST00000589758 OR4A15Q8NGL6 344 aa12.8□□□□□ -0.36
MBD1-220ENST00000589758 RFWD2Q8NHY2 731 aa12.8□□□□□ -0.36
MBD1-220ENST00000589758 ABHD3Q8WU67 409 aa12.8□□□□□ -0.36
MBD1-220ENST00000589758 ZBTB18Q99592 522 aa12.8□□□□□ -0.36
MBD1-220ENST00000589758 SRXN1Q9BYN0 137 aa12.8□□□□□ -0.36
MBD1-220ENST00000589758 LAT2Q9GZY6 243 aa12.8□□□□□ -0.36
MBD1-220ENST00000589758 C12orf49Q9H741 205 aa12.8□□□□□ -0.36
MBD1-220ENST00000589758 TCF7L2Q9NQB0 619 aa12.8□□□□□ -0.36
MBD1-220ENST00000589758 PRSS51A0A1B0GVH4 220 aa12.79□□□□□ -0.36
MBD1-220ENST00000589758 E9PBE3 544 aa12.79□□□□□ -0.36
MBD1-220ENST00000589758 ETV2O00321 342 aaPredicted RBP12.79□□□□□ -0.36
MBD1-220ENST00000589758 EDF1O60869 148 aaKnown RBP12.79□□□□□ -0.36
MBD1-220ENST00000589758 TMCC2O75069 709 aa12.79□□□□□ -0.36
MBD1-220ENST00000589758 TGDSO95455 350 aa12.79□□□□□ -0.36
MBD1-220ENST00000589758 NTN1O95631 604 aa12.79□□□□□ -0.36
MBD1-220ENST00000589758 YES1P07947 543 aa12.79□□□□□ -0.36
MBD1-220ENST00000589758 IDO1P14902 403 aa12.79□□□□□ -0.36
MBD1-220ENST00000589758 UQCRC2P22695 453 aa12.79□□□□□ -0.36
MBD1-220ENST00000589758 IL12AP29459 219 aa12.79□□□□□ -0.36
MBD1-220ENST00000589758 RNF144AP50876 292 aaPredicted RBP12.79□□□□□ -0.36
MBD1-220ENST00000589758 RAC3P60763 192 aa12.79□□□□□ -0.36
MBD1-220ENST00000589758 PHC1P78364 1004 aa12.79□□□□□ -0.36
MBD1-220ENST00000589758 SF3A3Q12874 501 aaKnown RBP eCLIP12.79□□□□□ -0.36
MBD1-220ENST00000589758 QPRTQ15274 297 aa12.79□□□□□ -0.36
MBD1-220ENST00000589758 NDUFAF6Q330K2 333 aa12.79□□□□□ -0.36
MBD1-220ENST00000589758 C3orf33Q6P1S2 294 aa12.79□□□□□ -0.36
MBD1-220ENST00000589758 ZNF704Q6ZNC4 412 aaPredicted RBP12.79□□□□□ -0.36
MBD1-220ENST00000589758 C16orf62Q7Z3J2 963 aa12.79□□□□□ -0.36
MBD1-220ENST00000589758 CLEC4FQ8N1N0 589 aa12.79□□□□□ -0.36
MBD1-220ENST00000589758 ATP6V1C2Q8NEY4 427 aa12.79□□□□□ -0.36
MBD1-220ENST00000589758 MIPOL1Q8TD10 442 aa12.79□□□□□ -0.36
MBD1-220ENST00000589758 TMEM234Q8WY98 164 aa12.79□□□□□ -0.36
MBD1-220ENST00000589758 ST8SIA1Q92185 356 aa12.79□□□□□ -0.36
MBD1-220ENST00000589758 TESCQ96BS2 214 aa12.79□□□□□ -0.36
MBD1-220ENST00000589758 USB1Q9BQ65 265 aaKnown RBP12.79□□□□□ -0.36
MBD1-220ENST00000589758 ZNF350Q9GZX5 532 aa12.79□□□□□ -0.36
MBD1-220ENST00000589758 OR51I1Q9H343 314 aa12.79□□□□□ -0.36
MBD1-220ENST00000589758 SERHL2Q9H4I8 314 aa12.79□□□□□ -0.36
MBD1-220ENST00000589758 COQ10BQ9H8M1 238 aa12.79□□□□□ -0.36
MBD1-220ENST00000589758 NPHS2Q9NP85 383 aa12.79□□□□□ -0.36
MBD1-220ENST00000589758 NGBQ9NPG2 151 aa12.79□□□□□ -0.36
MBD1-220ENST00000589758 SERINC1Q9NRX5 453 aa12.79□□□□□ -0.36
MBD1-220ENST00000589758 KLHL9Q9P2J3 617 aa12.79□□□□□ -0.36
MBD1-220ENST00000589758 DCTN4Q9UJW0 460 aa12.79□□□□□ -0.36
MBD1-220ENST00000589758 RAI1Q7Z5J4 1906 aaPredicted RBP12.78□□□□□ -0.36
MBD1-220ENST00000589758 MTORP42345 2549 aa12.78□□□□□ -0.36
MBD1-220ENST00000589758 DNAJA2O60884 412 aa12.78□□□□□ -0.36
MBD1-220ENST00000589758 UGT2B17O75795 530 aa12.78□□□□□ -0.36
MBD1-220ENST00000589758 CSTAP01040 98 aa12.78□□□□□ -0.36
MBD1-220ENST00000589758 VIMP08670 466 aaKnown RBP12.78□□□□□ -0.36
MBD1-220ENST00000589758 PGCP20142 388 aa12.78□□□□□ -0.36
MBD1-220ENST00000589758 CCR4P51679 360 aa12.78□□□□□ -0.36
MBD1-220ENST00000589758 RPS26P62854 115 aaKnown RBP12.78□□□□□ -0.36
MBD1-220ENST00000589758 SKP2Q13309 424 aa12.78□□□□□ -0.36
MBD1-220ENST00000589758 GSTA3Q16772 222 aa12.78□□□□□ -0.36
MBD1-220ENST00000589758 TIGD2Q4W5G0 525 aa12.78□□□□□ -0.36
MBD1-220ENST00000589758 PDCD4Q53EL6 469 aaKnown RBP12.78□□□□□ -0.36
MBD1-220ENST00000589758 ATAD3BQ5T9A4 648 aa12.78□□□□□ -0.36
MBD1-220ENST00000589758 HEPHL1Q6MZM0 1159 aa12.78□□□□□ -0.36
MBD1-220ENST00000589758 TFAP2EQ6VUC0 442 aa12.78□□□□□ -0.36
MBD1-220ENST00000589758 EIF3MQ7L2H7 374 aaKnown RBP12.78□□□□□ -0.36
MBD1-220ENST00000589758 NUFIP2Q7Z417 695 aaKnown RBP12.78□□□□□ -0.36
MBD1-220ENST00000589758 WFDC8Q8IUA0 241 aa12.78□□□□□ -0.36
MBD1-220ENST00000589758 TUSC5Q8IXB3 177 aa12.78□□□□□ -0.36
MBD1-220ENST00000589758 GABRG1Q8N1C3 465 aa12.78□□□□□ -0.36
MBD1-220ENST00000589758 PLPPR2Q96GM1 343 aa12.78□□□□□ -0.36
MBD1-220ENST00000589758 TMEM204Q9BSN7 226 aa12.78□□□□□ -0.36
MBD1-220ENST00000589758 CCDC28BQ9BUN5 200 aa12.78□□□□□ -0.36
MBD1-220ENST00000589758 BDH2Q9BUT1 245 aa12.78□□□□□ -0.36
MBD1-220ENST00000589758 THUMPD3Q9BV44 507 aaKnown RBP12.78□□□□□ -0.36
MBD1-220ENST00000589758 GSX2Q9BZM3 304 aa12.78□□□□□ -0.36
MBD1-220ENST00000589758 BCO1Q9HAY6 547 aa12.78□□□□□ -0.36
MBD1-220ENST00000589758 POLE3Q9NRF9 147 aa12.78□□□□□ -0.36
MBD1-220ENST00000589758 MKLN1Q9UL63 735 aa12.78□□□□□ -0.36
MBD1-220ENST00000589758 DSCAMO60469 2012 aa12.78□□□□□ -0.36
MBD1-220ENST00000589758 A0A1W2PNR3 127 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms