RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 TNFRSF1BP20333 461 aa17.14■□□□□ 0.33
CLPTM1-209ENST00000588855 IL11P20809 199 aa17.14■□□□□ 0.33
CLPTM1-209ENST00000588855 EIF1P41567 113 aaKnown RBP17.14■□□□□ 0.33
CLPTM1-209ENST00000588855 RGS8P57771 180 aaPredicted RBP17.14■□□□□ 0.33
CLPTM1-209ENST00000588855 CD163Q86VB7 1156 aa17.14■□□□□ 0.33
CLPTM1-209ENST00000588855 CADM2Q8N3J6 435 aa17.14■□□□□ 0.33
CLPTM1-209ENST00000588855 OR4D11Q8NGI4 311 aa17.14■□□□□ 0.33
CLPTM1-209ENST00000588855 OR5M9Q8NGP3 310 aa17.14■□□□□ 0.33
CLPTM1-209ENST00000588855 VANGL1Q8TAA9 524 aaPredicted RBP17.14■□□□□ 0.33
CLPTM1-209ENST00000588855 FAM57AQ8TBR7 257 aa17.14■□□□□ 0.33
CLPTM1-209ENST00000588855 TMEM234Q8WY98 164 aa17.14■□□□□ 0.33
CLPTM1-209ENST00000588855 TPD52L3Q96J77 140 aa17.14■□□□□ 0.33
CLPTM1-209ENST00000588855 MRGPRX4Q96LA9 322 aa17.14■□□□□ 0.33
CLPTM1-209ENST00000588855 TIMP4Q99727 224 aa17.14■□□□□ 0.33
CLPTM1-209ENST00000588855 ACAD8Q9UKU7 415 aa17.14■□□□□ 0.33
CLPTM1-209ENST00000588855 BAG5Q9UL15 447 aa17.14■□□□□ 0.33
CLPTM1-209ENST00000588855 SNX13Q9Y5W8 968 aa17.14■□□□□ 0.33
CLPTM1-209ENST00000588855 UBR5O95071 2799 aaPredicted RBP17.13■□□□□ 0.33
CLPTM1-209ENST00000588855 EBAG9O00559 213 aa17.13■□□□□ 0.33
CLPTM1-209ENST00000588855 GMNNO75496 209 aa17.13■□□□□ 0.33
CLPTM1-209ENST00000588855 ZNF682O95780 498 aa17.13■□□□□ 0.33
CLPTM1-209ENST00000588855 GP1BBP13224 206 aa17.13■□□□□ 0.33
CLPTM1-209ENST00000588855 PLA2G2AP14555 144 aa17.13■□□□□ 0.33
CLPTM1-209ENST00000588855 POU3F2P20265 443 aaPredicted RBP17.13■□□□□ 0.33
CLPTM1-209ENST00000588855 LHX2P50458 406 aa17.13■□□□□ 0.33
CLPTM1-209ENST00000588855 DLX5P56178 289 aa17.13■□□□□ 0.33
CLPTM1-209ENST00000588855 SELENOWP63302 87 aa17.13■□□□□ 0.33
CLPTM1-209ENST00000588855 BNIP2Q12982 314 aa17.13■□□□□ 0.33
CLPTM1-209ENST00000588855 ENPP6Q6UWR7 440 aa17.13■□□□□ 0.33
CLPTM1-209ENST00000588855 PLEKHM3Q6ZWE6 761 aa17.13■□□□□ 0.33
CLPTM1-209ENST00000588855 CBLL1Q75N03 491 aa17.13■□□□□ 0.33
CLPTM1-209ENST00000588855 RBM45Q8IUH3 476 aaKnown RBP17.13■□□□□ 0.33
CLPTM1-209ENST00000588855 SMPDL3BQ92485 455 aa17.13■□□□□ 0.33
CLPTM1-209ENST00000588855 PROX1Q92786 737 aa17.13■□□□□ 0.33
CLPTM1-209ENST00000588855 PRR14Q9BWN1 585 aa17.13■□□□□ 0.33
CLPTM1-209ENST00000588855 PNPLA3Q9NST1 481 aa17.13■□□□□ 0.33
CLPTM1-209ENST00000588855 ADPRHL2Q9NX46 363 aa17.13■□□□□ 0.33
CLPTM1-209ENST00000588855 TESQ9UGI8 421 aaKnown RBP17.13■□□□□ 0.33
CLPTM1-209ENST00000588855 OSGIN2Q9Y236 505 aa17.13■□□□□ 0.33
CLPTM1-209ENST00000588855 BCKDKO14874 412 aa17.12■□□□□ 0.33
CLPTM1-209ENST00000588855 EFNA2O43921 213 aa17.12■□□□□ 0.33
CLPTM1-209ENST00000588855 TPST2O60704 377 aa17.12■□□□□ 0.33
CLPTM1-209ENST00000588855 ME2P23368 584 aa17.12■□□□□ 0.33
CLPTM1-209ENST00000588855 HTR2AP28223 471 aa17.12■□□□□ 0.33
CLPTM1-209ENST00000588855 ELK4P28324 431 aa17.12■□□□□ 0.33
CLPTM1-209ENST00000588855 ADH6P28332 368 aa17.12■□□□□ 0.33
CLPTM1-209ENST00000588855 SLC1A3P43003 542 aa17.12■□□□□ 0.33
CLPTM1-209ENST00000588855 RASSF2P50749 326 aa17.12■□□□□ 0.33
CLPTM1-209ENST00000588855 NCALDP61601 193 aa17.12■□□□□ 0.33
CLPTM1-209ENST00000588855 MERTKQ12866 999 aa17.12■□□□□ 0.33
CLPTM1-209ENST00000588855 NPTX1Q15818 432 aa17.12■□□□□ 0.33
CLPTM1-209ENST00000588855 EMC4Q5J8M3 183 aa17.12■□□□□ 0.33
CLPTM1-209ENST00000588855 WLSQ5T9L3 541 aa17.12■□□□□ 0.33
CLPTM1-209ENST00000588855 POMZP3Q6PJE2 187 aa17.12■□□□□ 0.33
CLPTM1-209ENST00000588855 Q6ZPB1 254 aaPredicted RBP17.12■□□□□ 0.33
CLPTM1-209ENST00000588855 CCDC121Q6ZUS5 278 aa17.12■□□□□ 0.33
CLPTM1-209ENST00000588855 GRINAQ7Z429 371 aa17.12■□□□□ 0.33
CLPTM1-209ENST00000588855 VTCN1Q7Z7D3 282 aa17.12■□□□□ 0.33
CLPTM1-209ENST00000588855 OR6T1Q8NGN1 323 aa17.12■□□□□ 0.33
CLPTM1-209ENST00000588855 CCDC124Q96CT7 223 aaKnown RBP17.12■□□□□ 0.33
CLPTM1-209ENST00000588855 WDYHV1Q96HA8 205 aa17.12■□□□□ 0.33
CLPTM1-209ENST00000588855 PRDM14Q9GZV8 571 aa17.12■□□□□ 0.33
CLPTM1-209ENST00000588855 TMEM185BQ9H7F4 350 aa17.12■□□□□ 0.33
CLPTM1-209ENST00000588855 GORASP2Q9H8Y8 452 aa17.12■□□□□ 0.33
CLPTM1-209ENST00000588855 TINAGQ9UJW2 476 aa17.12■□□□□ 0.33
CLPTM1-209ENST00000588855 CAMK2AQ9UQM7 478 aa17.12■□□□□ 0.33
CLPTM1-209ENST00000588855 SH3GLB1Q9Y371 365 aa17.12■□□□□ 0.33
CLPTM1-209ENST00000588855 LINC01387J3KSC0 135 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 DNAJC8O75937 253 aaPredicted RBP17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 PEPDP12955 493 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 ZNF708P17019 499 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 CLDN18P56856 261 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 COPZ1P61923 177 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 EIF2S3LQ2VIR3 472 aaKnown RBP17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 GXYLT1Q4G148 440 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 WBP2NLQ6ICG8 309 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 CARM1Q86X55 608 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 UBQLNLQ8IYU4 475 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 CADM1Q9BY67 442 aaKnown RBP17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 EVA1AQ9H8M9 152 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 CTPS2Q9NRF8 586 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 SH3BGRL2Q9UJC5 107 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 SLC9A8Q9Y2E8 581 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 MYO18BQ8IUG5 2567 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 H0YC42 278 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 PRRG2O14669 202 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 SEC14L5O43304 696 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 OPN1LWP04000 364 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 ATP6V1B2P21281 511 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 TACR3P29371 465 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 OR1E2P47887 323 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 TPD52P55327 224 aaPredicted RBP17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 CLDN20P56880 219 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 SRYQ05066 204 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 RANBP3LQ86VV4 465 aaPredicted RBP17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 DOLPP1Q86YN1 238 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 OR52E4Q8NGH9 312 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 LZICQ8WZA0 190 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 RELTQ969Z4 430 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 C3orf49Q96BT1 292 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms