RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 RAB36O95755 333 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 VIPP01282 170 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 IFNA16P05015 189 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 CBSLP0DN79 551 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 IFI30P13284 250 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 ADRB3P13945 408 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 HSD3B1P14060 373 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 EPB42P16452 691 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 CPEP16870 476 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 ATF4P18848 351 aaPredicted RBP3.84□□□□□ -1.79
LIG3-211ENST00000588713 ENPP1P22413 925 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 GALP22466 123 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 LHCGRP22888 699 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 HSD3B2P26439 372 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 STOMP27105 288 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 FGF9P31371 208 aaPredicted RBP3.84□□□□□ -1.79
LIG3-211ENST00000588713 GABRA5P31644 462 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 OTX2P32243 289 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 MC4RP32245 332 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 CBSP35520 551 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 RPS19P39019 145 aaKnown RBP3.84□□□□□ -1.79
LIG3-211ENST00000588713 SOX3P41225 446 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 GPR3P46089 330 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 LIMS1P48059 325 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 HSPA7P48741 367 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 CLCNKAP51800 687 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 RAG2P55895 527 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 AP1S2P56377 157 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 B2MP61769 119 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 DCAF7P61962 342 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 YPEL5P62699 121 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 RPS24P62847 133 aaKnown RBP3.84□□□□□ -1.79
LIG3-211ENST00000588713 POU6F2P78424 691 aaPredicted RBP3.84□□□□□ -1.79
LIG3-211ENST00000588713 S100A12P80511 92 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 PLIN5Q00G26 463 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 HMGCS1Q01581 520 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 ZNF91Q05481 1191 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 CACNG1Q06432 222 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 SP140Q13342 867 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 SNTA1Q13424 505 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 GALEQ14376 348 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 IHHQ14623 411 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 NFATC4Q14934 902 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 SPHARQ15513 63 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 OCLNQ16625 522 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 NDUFA9Q16795 377 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 MICAQ29983 383 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 KLHL22Q53GT1 634 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 SPIN4Q56A73 249 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 FBXO48Q5FWF7 155 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 ADGRF1Q5T601 910 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 PRAMEF17Q5VTA0 474 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 CD276Q5ZPR3 534 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 NADSYN1Q6IA69 706 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 MZT2AQ6P582 158 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 BRAT1Q6PJG6 821 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 CERS6Q6ZMG9 384 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 FGD2Q7Z6J4 655 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 VTCN1Q7Z7D3 282 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 SCD5Q86SK9 330 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 CFAP52Q8N1V2 620 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 ZBTB2Q8N680 514 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 SLC5A8Q8N695 610 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 KRTCAP2Q8N6L1 136 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 LRRC17Q8N6Y2 441 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 NANOGP1Q8N7R0 232 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 ZNF557Q8N988 423 aaPredicted RBP3.84□□□□□ -1.79
LIG3-211ENST00000588713 TP53I13Q8NBR0 393 aaPredicted RBP3.84□□□□□ -1.79
LIG3-211ENST00000588713 CLEC1AQ8NC01 280 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 PLA2G15Q8NCC3 412 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 HJURPQ8NCD3 748 aaPredicted RBP3.84□□□□□ -1.79
LIG3-211ENST00000588713 ZNF680Q8NEM1 530 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 ATP6V1C2Q8NEY4 427 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 OR8H1Q8NGG4 311 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 OR10G6Q8NH81 332 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 SGMS2Q8NHU3 365 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 FIBINQ8TAL6 211 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 TMEM163Q8TC26 289 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 UTP15Q8TED0 518 aaKnown RBP3.84□□□□□ -1.79
LIG3-211ENST00000588713 EEF1AKMT1Q8WVE0 214 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 PIH1D2Q8WWB5 315 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 ACOT12Q8WYK0 555 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 ELMO1Q92556 727 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 UFD1Q92890 307 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 PTP4A1Q93096 173 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 MR1Q95460 341 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 TRMT61AQ96FX7 289 aaKnown RBP3.84□□□□□ -1.79
LIG3-211ENST00000588713 DIRAS2Q96HU8 199 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 KCTD7Q96MP8 289 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 PSKH2Q96QS6 385 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 OR2M2Q96R28 347 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 PANX1Q96RD7 426 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 HBEGFQ99075 208 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 FEVQ99581 238 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 KCNJ15Q99712 375 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 PIP5K1AQ99755 562 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 EGFL8Q99944 293 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 SOSTQ9BQB4 213 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 INPP5KQ9BT40 448 aa3.84□□□□□ -1.79
LIG3-211ENST00000588713 TMEM43Q9BTV4 400 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms