RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 WBP4O75554 376 aaKnown RBP9.54□□□□□ -0.88
LIG3-203ENST00000585370 RCBTB2O95199 551 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 LYPD3O95274 346 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 UTS2O95399 124 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 GKN3PP0CG01 181 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 PRG2P13727 222 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 GABRB1P18505 474 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 FUT4P22083 530 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 HTR2AP28223 471 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 FMO3P31513 532 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 SLC6A8P48029 635 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 NR0B1P51843 470 aaKnown RBP9.54□□□□□ -0.88
LIG3-203ENST00000585370 CTBP2P56545 445 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 SLC35A2P78381 396 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 HOXC5Q00444 222 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 FOXD4Q12950 439 aaPredicted RBP9.54□□□□□ -0.88
LIG3-203ENST00000585370 SRSF6Q13247 344 aaKnown RBP9.54□□□□□ -0.88
LIG3-203ENST00000585370 EIF3IQ13347 325 aaKnown RBP9.54□□□□□ -0.88
LIG3-203ENST00000585370 EFR3AQ14156 821 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 OCLNQ16625 522 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 TMEM44Q2T9K0 475 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 TMEM201Q5SNT2 666 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 DCAF12Q5T6F0 453 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 HSDL2Q6YN16 418 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 TMPRSS11FQ6ZWK6 438 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 PRSS48Q7RTY5 328 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 MRGPREQ86SM8 312 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 CCDC71Q8IV32 467 aaPredicted RBP9.54□□□□□ -0.88
LIG3-203ENST00000585370 NKAIN4Q8IVV8 208 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 C9orf40Q8IXQ3 194 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 FAM26EQ8N5C1 309 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 ZNF441Q8N8Z8 693 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 FAM71CQ8NEG0 241 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 NFAM1Q8NET5 270 aaPredicted RBP9.54□□□□□ -0.88
LIG3-203ENST00000585370 OR4C3Q8NH37 302 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 SLC38A2Q96QD8 506 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 PRSS27Q9BQR3 290 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 CRB3Q9BUF7 120 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 PRR14Q9BWN1 585 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 POLDIP3Q9BY77 421 aaKnown RBP9.54□□□□□ -0.88
LIG3-203ENST00000585370 FAM117AQ9C073 453 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 LAT2Q9GZY6 243 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 C12orf10Q9HB07 376 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 CTPS2Q9NRF8 586 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 RASSF1Q9NS23 344 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 MED17Q9NVC6 651 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 ZNF226Q9NYT6 803 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 IL20Q9NYY1 176 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 CNOT2Q9NZN8 540 aaKnown RBP9.54□□□□□ -0.88
LIG3-203ENST00000585370 PSORS1C1Q9UIG5 152 aa9.54□□□□□ -0.88
LIG3-203ENST00000585370 LOC102723996A0A087X1L8 192 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 A0A1B0GWA3 101 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 IRGMA1A4Y4 181 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 OR6C70A6NIJ9 312 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 M0R3G1 203 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 ZNF264O43296 627 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 KLF4O43474 513 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 PPM1BO75688 479 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 ZFAND5O76080 213 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 OR6B1O95007 311 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 IGF2P01344 180 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 THY1P04216 161 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 TP53P04637 393 aaPredicted RBP9.53□□□□□ -0.88
LIG3-203ENST00000585370 PNMTP11086 282 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 UBL4AP11441 157 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 ITIH1P19827 911 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 RNF4P78317 190 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 PLCXD2Q0VAA5 305 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 GINS1Q14691 196 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 LINC00303Q3SY05 128 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 FNDC7Q5VTL7 733 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 WBP2NLQ6ICG8 309 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 SLC27A4Q6P1M0 643 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 LINC00114Q6XXX2 140 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 ZNF517Q6ZMY9 492 aaPredicted RBP9.53□□□□□ -0.88
LIG3-203ENST00000585370 LANCL3Q6ZV70 420 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 MISPQ8IVT2 679 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 NRMQ8IXM6 262 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 CYP4Z2PQ8N1L4 340 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 SLC15A4Q8N697 577 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 ZNF321PQ8N8H1 164 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 EXD3Q8N9H8 876 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 ZNF420Q8TAQ5 688 aaPredicted RBP9.53□□□□□ -0.88
LIG3-203ENST00000585370 FCGR1BQ92637 280 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 TAAR9Q96RI9 348 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 GAL3ST4Q96RP7 486 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 SPSB2Q99619 263 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 SLC19A3Q9BZV2 496 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 APMAPQ9HDC9 416 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 WDR70Q9NW82 654 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 PISDQ9UG56 409 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 ZNF223Q9UK11 482 aaPredicted RBP9.53□□□□□ -0.88
LIG3-203ENST00000585370 BAIAP2Q9UQB8 552 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 LOXL2Q9Y4K0 774 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 PCDHGB6Q9Y5F9 930 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 NAV2Q8IVL1 2488 aa9.53□□□□□ -0.88
LIG3-203ENST00000585370 UNC119BA6NIH7 251 aa9.52□□□□□ -0.89
LIG3-203ENST00000585370 ALG1L2C9J202 215 aa9.52□□□□□ -0.89
LIG3-203ENST00000585370 PYCARD-AS1I3L0S3 204 aa9.52□□□□□ -0.89
LIG3-203ENST00000585370 XPNPEP2O43895 674 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms