RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 PLXDC2Q6UX71 529 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 SLC16A9Q7RTY1 509 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 APTXQ7Z2E3 356 aaKnown RBP1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 TMEM150AQ86TG1 271 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 TMEM139Q8IV31 216 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 CCDC50Q8IVM0 306 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 LYG1Q8N1E2 194 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 BANPQ8N9N5 519 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF248Q8NDW4 579 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 DDHD1Q8NEL9 900 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 OR10Q1Q8NGQ4 319 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 RAB3IL1Q8TBN0 382 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 RDH11Q8TC12 318 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 TANKQ92844 425 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 TMEM186Q96B77 213 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 FBXO17Q96EF6 278 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF354BQ96LW1 612 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 NAPGQ99747 312 aaPredicted RBP1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 CTRCQ99895 268 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ERP44Q9BS26 406 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 TFB2MQ9H5Q4 396 aaKnown RBP1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ESRP2Q9H6T0 727 aaKnown RBP1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 WDR76Q9H967 626 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 COG4Q9H9E3 785 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 PDFQ9HBH1 243 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 S100A14Q9HCY8 104 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 PIGVQ9NUD9 493 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 C1orf123Q9NWV4 160 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 OCIAD1Q9NX40 245 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 IFNKQ9P0W0 207 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 TRIM10Q9UDY6 481 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 PCYOX1Q9UHG3 505 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 GNPTGQ9UJJ9 305 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 PILRBQ9UKJ0 227 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 GPR132Q9UNW8 380 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 TMED7Q9Y3B3 224 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 HES2Q9Y543 173 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 PTGDR2Q9Y5Y4 395 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ETV7Q9Y603 341 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 MYO15AQ9UKN7 3530 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ANAPC1Q9H1A4 1944 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 TET1Q8NFU7 2136 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 A0A087X0K7 114 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 SAA2-SAA4A0A096LPE2 208 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ARPC4-TTLL3A0A0A6YYG9 625 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 IGHV1OR15-9A0A0B4J2B8 117 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 PLSCR5A0PG75 271 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 CASKO14936 926 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 RRP8O43159 456 aaKnown RBP1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 NUDT21O43809 227 aaKnown RBP1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ZMPSTE24O75844 475 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 LDOC1O95751 146 aaPredicted RBP1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 AP2A1O95782 977 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 JCHAINP01591 159 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 GUSBP08236 651 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 HOXD4P09016 255 aaPredicted RBP1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ANXA4P09525 319 aaPredicted RBP1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 SKILP12757 684 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 XRCC1P18887 633 aaPredicted RBP1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 IDSP22304 550 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 NUP62P37198 522 aaPredicted RBP1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 CSKP41240 450 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 NSG1P42857 185 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 RFX2P48378 723 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 CNN1P51911 297 aaKnown RBP1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 STC1P52823 247 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF234Q14588 700 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 KIR2DS3Q14952 304 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 HEPACAMQ14CZ8 416 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 POM121L1PQ3SYA9 428 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 NADK2Q4G0N4 442 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 SYT14P1Q58G82 188 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 FBXL22Q6P050 247 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 SLC27A4Q6P1M0 643 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 LRRC8BQ6P9F7 803 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 TMEM64Q6YI46 380 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 TRMT10CQ7L0Y3 403 aaKnown RBP1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 TRMT1LQ7Z2T5 733 aaKnown RBP1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 SNX20Q7Z614 316 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ASPGQ86U10 573 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 STHQ8IWL8 128 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 MUC20Q8N307 709 aaPredicted RBP1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 OR13A1Q8NGR1 328 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 OR4C6Q8NH72 309 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 OR10G6Q8NH81 332 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 FAM76AQ8TAV0 307 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ITFG1Q8TB96 612 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 MCOLN3Q8TDD5 553 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 UBTD2Q8WUN7 234 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 HTR3CQ8WXA8 447 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 IMP4Q96G21 291 aaKnown RBP1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 RBM18Q96H35 190 aaKnown RBP1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ART5Q96L15 291 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 OLFM3Q96PB7 478 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF385AQ96PM9 386 aaKnown RBP1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 UHRF2Q96PU4 802 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 CENPKQ9BS16 269 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ALKBH7Q9BT30 221 aaPredicted RBP1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ROPN1BQ9BZX4 212 aaPredicted RBP1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 GOLPH3Q9H4A6 298 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms