RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 CAPN3P20807 821 aa24.37■■□□□ 1.49
SMARCD2-210ENST00000584400 IL11P20809 199 aa24.37■■□□□ 1.49
SMARCD2-210ENST00000584400 RPS4Y1P22090 263 aaKnown RBP24.37■■□□□ 1.49
SMARCD2-210ENST00000584400 FKBP2P26885 142 aaKnown RBP24.37■■□□□ 1.49
SMARCD2-210ENST00000584400 APOBEC1P41238 236 aaKnown RBP24.37■■□□□ 1.49
SMARCD2-210ENST00000584400 TMEM176BQ3YBM2 270 aaPredicted RBP24.37■■□□□ 1.49
SMARCD2-210ENST00000584400 FAM214BQ7L5A3 538 aa24.37■■□□□ 1.49
SMARCD2-210ENST00000584400 ZNF440Q8IYI8 595 aa24.37■■□□□ 1.49
SMARCD2-210ENST00000584400 TSPEARQ8WU66 669 aa24.37■■□□□ 1.49
SMARCD2-210ENST00000584400 STARD4Q96DR4 205 aa24.37■■□□□ 1.49
SMARCD2-210ENST00000584400 ZNF232Q9UNY5 417 aa24.37■■□□□ 1.49
SMARCD2-210ENST00000584400 NDUFAF1Q9Y375 327 aa24.37■■□□□ 1.49
SMARCD2-210ENST00000584400 TUBAL3A6NHL2 446 aa24.36■■□□□ 1.49
SMARCD2-210ENST00000584400 SMNDC1O75940 238 aaKnown RBP eCLIP24.36■■□□□ 1.49
SMARCD2-210ENST00000584400 AQP8O94778 261 aa24.36■■□□□ 1.49
SMARCD2-210ENST00000584400 RYKP34925 604 aa24.36■■□□□ 1.49
SMARCD2-210ENST00000584400 KIR2DL2P43627 348 aaPredicted RBP24.36■■□□□ 1.49
SMARCD2-210ENST00000584400 MERTKQ12866 999 aa24.36■■□□□ 1.49
SMARCD2-210ENST00000584400 LARS2Q15031 903 aaKnown RBP24.36■■□□□ 1.49
SMARCD2-210ENST00000584400 LIN52Q52LA3 116 aa24.36■■□□□ 1.49
SMARCD2-210ENST00000584400 PRAMEF8Q5VWM4 474 aa24.36■■□□□ 1.49
SMARCD2-210ENST00000584400 PRAMEF7Q5VXH5 474 aa24.36■■□□□ 1.49
SMARCD2-210ENST00000584400 GRINAQ7Z429 371 aa24.36■■□□□ 1.49
SMARCD2-210ENST00000584400 HMGN2P46Q86SG4 172 aa24.36■■□□□ 1.49
SMARCD2-210ENST00000584400 ATP6V1C2Q8NEY4 427 aa24.36■■□□□ 1.49
SMARCD2-210ENST00000584400 OR52P1PQ8NH57 321 aa24.36■■□□□ 1.49
SMARCD2-210ENST00000584400 FAM222BQ8WU58 562 aa24.36■■□□□ 1.49
SMARCD2-210ENST00000584400 SLC25A43Q8WUT9 341 aaPredicted RBP24.36■■□□□ 1.49
SMARCD2-210ENST00000584400 SLC52A3Q9NQ40 469 aa24.36■■□□□ 1.49
SMARCD2-210ENST00000584400 LEF1Q9UJU2 399 aaPredicted RBP24.36■■□□□ 1.49
SMARCD2-210ENST00000584400 GMEB1Q9Y692 573 aa24.36■■□□□ 1.49
SMARCD2-210ENST00000584400 DSPPQ9NZW4 1301 aa24.35■■□□□ 1.49
SMARCD2-210ENST00000584400 MED12Q93074 2177 aa24.35■■□□□ 1.49
SMARCD2-210ENST00000584400 EVPLLA8MZ36 301 aa24.35■■□□□ 1.49
SMARCD2-210ENST00000584400 C5orf58C9J3I9 102 aa24.35■■□□□ 1.49
SMARCD2-210ENST00000584400 ANGPT2O15123 496 aa24.35■■□□□ 1.49
SMARCD2-210ENST00000584400 EFNA2O43921 213 aa24.35■■□□□ 1.49
SMARCD2-210ENST00000584400 VIMP08670 466 aaKnown RBP24.35■■□□□ 1.49
SMARCD2-210ENST00000584400 CD8BP10966 210 aa24.35■■□□□ 1.49
SMARCD2-210ENST00000584400 BMP2P12643 396 aa24.35■■□□□ 1.49
SMARCD2-210ENST00000584400 HOXB9P17482 250 aaPredicted RBP24.35■■□□□ 1.49
SMARCD2-210ENST00000584400 HTR3AP46098 478 aa24.35■■□□□ 1.49
SMARCD2-210ENST00000584400 PCYT1AP49585 367 aa24.35■■□□□ 1.49
SMARCD2-210ENST00000584400 CTBP2P56545 445 aa24.35■■□□□ 1.49
SMARCD2-210ENST00000584400 SIRPAP78324 504 aa24.35■■□□□ 1.49
SMARCD2-210ENST00000584400 PAGE3Q5JUK9 113 aa24.35■■□□□ 1.49
SMARCD2-210ENST00000584400 PLEKHM3Q6ZWE6 761 aa24.35■■□□□ 1.49
SMARCD2-210ENST00000584400 TMEM19Q96HH6 336 aa24.35■■□□□ 1.49
SMARCD2-210ENST00000584400 SLC39A3Q9BRY0 314 aa24.35■■□□□ 1.49
SMARCD2-210ENST00000584400 TMEM120AQ9BXJ8 343 aa24.35■■□□□ 1.49
SMARCD2-210ENST00000584400 A4GALTQ9NPC4 353 aa24.35■■□□□ 1.49
SMARCD2-210ENST00000584400 PROCRQ9UNN8 238 aa24.35■■□□□ 1.49
SMARCD2-210ENST00000584400 IFT52Q9Y366 437 aa24.35■■□□□ 1.49
SMARCD2-210ENST00000584400 HCFC1P51610 2035 aa24.34■■□□□ 1.49
SMARCD2-210ENST00000584400 NBPF19A0A087WUL8 3843 aa24.34■■□□□ 1.49
SMARCD2-210ENST00000584400 CLDN24A6NM45 220 aa24.34■■□□□ 1.49
SMARCD2-210ENST00000584400 THBS1P07996 1170 aa24.34■■□□□ 1.49
SMARCD2-210ENST00000584400 RNPS1Q15287 305 aaKnown RBP24.34■■□□□ 1.49
SMARCD2-210ENST00000584400 MAPK11Q15759 364 aa24.34■■□□□ 1.49
SMARCD2-210ENST00000584400 CNOT9Q92600 299 aaKnown RBP24.34■■□□□ 1.49
SMARCD2-210ENST00000584400 ZNF385DQ9H6B1 395 aa24.34■■□□□ 1.49
SMARCD2-210ENST00000584400 BCL2L10Q9HD36 194 aa24.34■■□□□ 1.49
SMARCD2-210ENST00000584400 DNAJB12Q9NXW2 375 aaKnown RBP24.34■■□□□ 1.49
SMARCD2-210ENST00000584400 GALNT8Q9NY28 637 aa24.34■■□□□ 1.49
SMARCD2-210ENST00000584400 SLC25A37Q9NYZ2 338 aa24.34■■□□□ 1.49
SMARCD2-210ENST00000584400 NIPSNAP3AQ9UFN0 247 aaPredicted RBP24.34■■□□□ 1.49
SMARCD2-210ENST00000584400 KIAA1549Q9HCM3 1950 aa24.33■■□□□ 1.49
SMARCD2-210ENST00000584400 CFAP73A6NFT4 308 aa24.33■■□□□ 1.49
SMARCD2-210ENST00000584400 SS18L1O75177 396 aaPredicted RBP24.33■■□□□ 1.49
SMARCD2-210ENST00000584400 SHC1P29353 583 aa24.33■■□□□ 1.49
SMARCD2-210ENST00000584400 CPOXP36551 454 aa24.33■■□□□ 1.49
SMARCD2-210ENST00000584400 IDH2P48735 452 aaKnown RBP24.33■■□□□ 1.49
SMARCD2-210ENST00000584400 ARFIP2P53365 341 aa24.33■■□□□ 1.49
SMARCD2-210ENST00000584400 RAC3P60763 192 aa24.33■■□□□ 1.49
SMARCD2-210ENST00000584400 GUSBP1Q15486 140 aa24.33■■□□□ 1.49
SMARCD2-210ENST00000584400 ZNF239Q16600 458 aaKnown RBP24.33■■□□□ 1.49
SMARCD2-210ENST00000584400 MRPL2Q5T653 305 aaKnown RBP24.33■■□□□ 1.49
SMARCD2-210ENST00000584400 VWA1Q6PCB0 445 aa24.33■■□□□ 1.49
SMARCD2-210ENST00000584400 BTLAQ7Z6A9 289 aa24.33■■□□□ 1.49
SMARCD2-210ENST00000584400 OR6K3Q8NGY3 331 aa24.33■■□□□ 1.49
SMARCD2-210ENST00000584400 BBS10Q8TAM1 723 aa24.33■■□□□ 1.49
SMARCD2-210ENST00000584400 LURAP1Q96LR2 239 aa24.33■■□□□ 1.49
SMARCD2-210ENST00000584400 CCDC134Q9H6E4 229 aa24.33■■□□□ 1.49
SMARCD2-210ENST00000584400 FANCFQ9NPI8 374 aa24.33■■□□□ 1.49
SMARCD2-210ENST00000584400 FGFR1OP2Q9NVK5 253 aa24.33■■□□□ 1.49
SMARCD2-210ENST00000584400 ELOVL5Q9NYP7 299 aa24.33■■□□□ 1.49
SMARCD2-210ENST00000584400 CRIM1Q9NZV1 1036 aa24.33■■□□□ 1.49
SMARCD2-210ENST00000584400 VAPAQ9P0L0 249 aa24.33■■□□□ 1.49
SMARCD2-210ENST00000584400 SLAMF8Q9P0V8 285 aa24.33■■□□□ 1.49
SMARCD2-210ENST00000584400 FAAHO00519 579 aa24.32■■□□□ 1.48
SMARCD2-210ENST00000584400 BCAS1O75363 584 aaPredicted RBP24.32■■□□□ 1.48
SMARCD2-210ENST00000584400 GUCY1A3Q02108 690 aa24.32■■□□□ 1.48
SMARCD2-210ENST00000584400 GCNT6Q5T4J0 391 aa24.32■■□□□ 1.48
SMARCD2-210ENST00000584400 ZZZ3Q8IYH5 903 aa24.32■■□□□ 1.48
SMARCD2-210ENST00000584400 SLC43A2Q8N370 569 aa24.32■■□□□ 1.48
SMARCD2-210ENST00000584400 CCDC106Q9BWC9 280 aa24.32■■□□□ 1.48
SMARCD2-210ENST00000584400 GP6Q9HCN6 339 aa24.32■■□□□ 1.48
SMARCD2-210ENST00000584400 NDRG3Q9UGV2 375 aa24.32■■□□□ 1.48
SMARCD2-210ENST00000584400 CDHR4A6H8M9 788 aa24.31■■□□□ 1.48
SMARCD2-210ENST00000584400 CLK1P49759 484 aaKnown RBP24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms