RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 NDRG3Q9UGV2 375 aa8.86□□□□□ -0.99
SKA2-208ENST00000583927 EDARQ9UNE0 448 aa8.86□□□□□ -0.99
SKA2-208ENST00000583927 EMC9Q9Y3B6 208 aa8.86□□□□□ -0.99
SKA2-208ENST00000583927 HEATR1Q9H583 2144 aaKnown RBP8.86□□□□□ -0.99
SKA2-208ENST00000583927 DSPPQ9NZW4 1301 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 CENPVL1A0A0U1RR11 272 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 CXCL13O43927 109 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 CHRM4P08173 479 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 BMP2P12643 396 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 HOXB9P17482 250 aaPredicted RBP8.85□□□□□ -0.99
SKA2-208ENST00000583927 APOBEC1P41238 236 aaKnown RBP8.85□□□□□ -0.99
SKA2-208ENST00000583927 SLC6A8P48029 635 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 CLK1P49759 484 aaKnown RBP8.85□□□□□ -0.99
SKA2-208ENST00000583927 IDH3AP50213 366 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 CASP9P55211 416 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 SESN3P58005 492 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 STX1BP61266 288 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 HPCAP84074 193 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 PLAURQ03405 335 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 CHRNEQ04844 493 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 FADDQ13158 208 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 GNA13Q14344 377 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 SYPL1Q16563 259 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 TIGD2Q4W5G0 525 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 GPAT3Q53EU6 434 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 PRAMEF8Q5VWM4 474 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 PRAMEF7Q5VXH5 474 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 BLOC1S3Q6QNY0 202 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 ZNF474Q6S9Z5 364 aaPredicted RBP8.85□□□□□ -0.99
SKA2-208ENST00000583927 SPNS3Q6ZMD2 512 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 TMEM200AQ86VY9 491 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 CNEP1R1Q8N9A8 125 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 DYDC1Q8WWB3 177 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 CKAP2Q8WWK9 683 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 ZNF524Q96C55 264 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 SIKE1Q9BRV8 207 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 TACO1Q9BSH4 297 aaKnown RBP8.85□□□□□ -0.99
SKA2-208ENST00000583927 THUMPD3Q9BV44 507 aaKnown RBP8.85□□□□□ -0.99
SKA2-208ENST00000583927 PRRG4Q9BZD6 226 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 CLEC4MQ9H2X3 399 aaPredicted RBP8.85□□□□□ -0.99
SKA2-208ENST00000583927 RAD21L1Q9H4I0 556 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 COQ10BQ9H8M1 238 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 TPT1P8Q9HAU6 139 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 FANCFQ9NPI8 374 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 SLC6A13Q9NSD5 602 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 DNAJB12Q9NXW2 375 aaKnown RBP8.85□□□□□ -0.99
SKA2-208ENST00000583927 P2RX2Q9UBL9 471 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 PROCRQ9UNN8 238 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 TESMINQ9Y4I5 508 aa8.85□□□□□ -0.99
SKA2-208ENST00000583927 CADP27708 2225 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 ZFHX3Q15911 3703 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 SH3D21A4FU49 640 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 C9JVG2 144 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 DNPH1O43598 174 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 SMNDC1O75940 238 aaKnown RBP eCLIP8.84□□□□□ -0.99
SKA2-208ENST00000583927 C1QCP02747 245 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 GSNP06396 782 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 DBIP07108 87 aaKnown RBP8.84□□□□□ -0.99
SKA2-208ENST00000583927 UBTFL6P0CB48 400 aaPredicted RBP8.84□□□□□ -0.99
SKA2-208ENST00000583927 POU2F1P14859 743 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 PPP3CBP16298 524 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 SHC1P29353 583 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 AGTR1P30556 359 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 DNAJA1P31689 397 aaKnown RBP8.84□□□□□ -0.99
SKA2-208ENST00000583927 SFTPDP35247 375 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 UGT2B10P36537 528 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 HTR3AP46098 478 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 CTBP2P56545 445 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 MAPK11Q15759 364 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 NDUFAF6Q330K2 333 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 TMEM176BQ3YBM2 270 aaPredicted RBP8.84□□□□□ -0.99
SKA2-208ENST00000583927 COX20Q5RI15 118 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 LRIF1Q5T3J3 769 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 BEND4Q6ZU67 534 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 PLEKHM3Q6ZWE6 761 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 GRINAQ7Z429 371 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 CDC20BQ86Y33 519 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 FUNDC1Q8IVP5 155 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 ZNF440Q8IYI8 595 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 ARFGAP2Q8N6H7 521 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 TMCO5AQ8N6Q1 288 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 ANKFN1Q8N957 763 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 ZNF610Q8N9Z0 462 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 OR9I1Q8NGQ6 314 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 LINC01560Q8TB33 94 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 SLC35B4Q969S0 331 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 REXO5Q96IC2 774 aaKnown RBP8.84□□□□□ -0.99
SKA2-208ENST00000583927 MARK4Q96L34 752 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 EBF4Q9BQW3 602 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 GPATCH1Q9BRR8 931 aaKnown RBP8.84□□□□□ -0.99
SKA2-208ENST00000583927 CCDC106Q9BWC9 280 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 POLDIP3Q9BY77 421 aaKnown RBP8.84□□□□□ -0.99
SKA2-208ENST00000583927 PAIP1Q9H074 479 aaKnown RBP8.84□□□□□ -0.99
SKA2-208ENST00000583927 TMEM185BQ9H7F4 350 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 BCO1Q9HAY6 547 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 SLC52A3Q9NQ40 469 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 SERINC1Q9NRX5 453 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 PCDHB14Q9Y5E9 798 aa8.84□□□□□ -0.99
SKA2-208ENST00000583927 SPIN1Q9Y657 262 aaPredicted RBP8.84□□□□□ -0.99
SKA2-208ENST00000583927 PLCE1Q9P212 2302 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms