RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	PIWIL2	Q8TC59	973 aa	Known RBP	13.41	□□□□□ -0.26
SREBF1-222	ENST00000583732	HS6ST2	Q96MM7	605 aa		13.41	□□□□□ -0.26
SREBF1-222	ENST00000583732	THUMPD3	Q9BV44	507 aa	Known RBP	13.41	□□□□□ -0.26
SREBF1-222	ENST00000583732	DUSP26	Q9BV47	211 aa		13.41	□□□□□ -0.26
SREBF1-222	ENST00000583732	SERHL2	Q9H4I8	314 aa		13.41	□□□□□ -0.26
SREBF1-222	ENST00000583732	ALG2	Q9H553	416 aa		13.41	□□□□□ -0.26
SREBF1-222	ENST00000583732	BCO1	Q9HAY6	547 aa		13.41	□□□□□ -0.26
SREBF1-222	ENST00000583732	GP6	Q9HCN6	339 aa		13.41	□□□□□ -0.26
SREBF1-222	ENST00000583732	CSPG4	Q6UVK1	2322 aa		13.41	□□□□□ -0.26
SREBF1-222	ENST00000583732	CENPVL1	A0A0U1RR11	272 aa		13.4	□□□□□ -0.26
SREBF1-222	ENST00000583732	SERINC4	A6NH21	518 aa		13.4	□□□□□ -0.26
SREBF1-222	ENST00000583732	EIF4E2	O60573	245 aa	Known RBP	13.4	□□□□□ -0.26
SREBF1-222	ENST00000583732	CYTIP	O60759	359 aa		13.4	□□□□□ -0.26
SREBF1-222	ENST00000583732	LYPLA1	O75608	230 aa	Predicted RBP	13.4	□□□□□ -0.26
SREBF1-222	ENST00000583732	FES	P07332	822 aa		13.4	□□□□□ -0.26
SREBF1-222	ENST00000583732	ARRB2	P32121	409 aa		13.4	□□□□□ -0.26
SREBF1-222	ENST00000583732	CASP9	P55211	416 aa		13.4	□□□□□ -0.26
SREBF1-222	ENST00000583732	RAC3	P60763	192 aa		13.4	□□□□□ -0.26
SREBF1-222	ENST00000583732	HBA1	P69905	142 aa		13.4	□□□□□ -0.26
SREBF1-222	ENST00000583732	ETFDH	Q16134	617 aa		13.4	□□□□□ -0.26
SREBF1-222	ENST00000583732	PGS1	Q32NB8	556 aa		13.4	□□□□□ -0.26
SREBF1-222	ENST00000583732	SLC25A53	Q5H9E4	307 aa		13.4	□□□□□ -0.26
SREBF1-222	ENST00000583732		Q6ZT83	130 aa		13.4	□□□□□ -0.26
SREBF1-222	ENST00000583732	ZNF100	Q8IYN0	542 aa		13.4	□□□□□ -0.26
SREBF1-222	ENST00000583732	CLECL1	Q8IZS7	167 aa		13.4	□□□□□ -0.26
SREBF1-222	ENST00000583732	PSMA8	Q8TAA3	256 aa		13.4	□□□□□ -0.26
SREBF1-222	ENST00000583732	TUBGCP3	Q96CW5	907 aa		13.4	□□□□□ -0.26
SREBF1-222	ENST00000583732	SLC35G5	Q96KT7	338 aa		13.4	□□□□□ -0.26
SREBF1-222	ENST00000583732	SDF2	Q99470	211 aa		13.4	□□□□□ -0.26
SREBF1-222	ENST00000583732	PRPF18	Q99633	342 aa	Known RBP	13.4	□□□□□ -0.26
SREBF1-222	ENST00000583732	TRAF4	Q9BUZ4	470 aa	Predicted RBP	13.4	□□□□□ -0.26
SREBF1-222	ENST00000583732	TRIM2	Q9C040	744 aa		13.4	□□□□□ -0.26
SREBF1-222	ENST00000583732	BHLHE41	Q9C0J9	482 aa	Predicted RBP	13.4	□□□□□ -0.26
SREBF1-222	ENST00000583732	L2HGDH	Q9H9P8	463 aa		13.4	□□□□□ -0.26
SREBF1-222	ENST00000583732	MKS1	Q9NXB0	559 aa		13.4	□□□□□ -0.26
SREBF1-222	ENST00000583732	CISD1	Q9NZ45	108 aa	Known RBP	13.4	□□□□□ -0.26
SREBF1-222	ENST00000583732	NPAP1	Q9NZP6	1156 aa		13.4	□□□□□ -0.26
SREBF1-222	ENST00000583732	ZDHHC2	Q9UIJ5	367 aa		13.4	□□□□□ -0.26
SREBF1-222	ENST00000583732	RNF103-CHMP3	A0A140T963	221 aa		13.39	□□□□□ -0.27
SREBF1-222	ENST00000583732	ESPN	B1AK53	854 aa		13.39	□□□□□ -0.27
SREBF1-222	ENST00000583732	ABCD4	O14678	606 aa		13.39	□□□□□ -0.27
SREBF1-222	ENST00000583732	IGHV3-9	P01782	118 aa		13.39	□□□□□ -0.27
SREBF1-222	ENST00000583732	UBTFL6	P0CB48	400 aa	Predicted RBP	13.39	□□□□□ -0.27
SREBF1-222	ENST00000583732	MATN1	P21941	496 aa		13.39	□□□□□ -0.27
SREBF1-222	ENST00000583732	IGHV1-2	P23083	117 aa		13.39	□□□□□ -0.27
SREBF1-222	ENST00000583732	MERTK	Q12866	999 aa		13.39	□□□□□ -0.27
SREBF1-222	ENST00000583732	SKP2	Q13309	424 aa		13.39	□□□□□ -0.27
SREBF1-222	ENST00000583732	HEPHL1	Q6MZM0	1159 aa		13.39	□□□□□ -0.27
SREBF1-222	ENST00000583732	C6orf120	Q7Z4R8	191 aa		13.39	□□□□□ -0.27
SREBF1-222	ENST00000583732	NATD1	Q8N6N6	113 aa		13.39	□□□□□ -0.27
SREBF1-222	ENST00000583732	ARL8A	Q96BM9	186 aa		13.39	□□□□□ -0.27
SREBF1-222	ENST00000583732	MOAP1	Q96BY2	351 aa		13.39	□□□□□ -0.27
SREBF1-222	ENST00000583732	COQ8B	Q96D53	544 aa		13.39	□□□□□ -0.27
SREBF1-222	ENST00000583732	MUCL1	Q96DR8	90 aa		13.39	□□□□□ -0.27
SREBF1-222	ENST00000583732	PPP1R36	Q96LQ0	422 aa		13.39	□□□□□ -0.27
SREBF1-222	ENST00000583732	YAE1D1	Q9NRH1	226 aa		13.39	□□□□□ -0.27
SREBF1-222	ENST00000583732	KCNE5	Q9UJ90	142 aa		13.39	□□□□□ -0.27
SREBF1-222	ENST00000583732	MKLN1	Q9UL63	735 aa		13.39	□□□□□ -0.27
SREBF1-222	ENST00000583732	SHISA9	B4DS77	424 aa		13.38	□□□□□ -0.27
SREBF1-222	ENST00000583732	SSX4	O60224	188 aa		13.38	□□□□□ -0.27
SREBF1-222	ENST00000583732	FCMR	O60667	390 aa		13.38	□□□□□ -0.27
SREBF1-222	ENST00000583732	RAD51D	O75771	328 aa		13.38	□□□□□ -0.27
SREBF1-222	ENST00000583732	CSTA	P01040	98 aa		13.38	□□□□□ -0.27
SREBF1-222	ENST00000583732	CD8A	P01732	235 aa		13.38	□□□□□ -0.27
SREBF1-222	ENST00000583732	TFPI	P10646	304 aa		13.38	□□□□□ -0.27
SREBF1-222	ENST00000583732	G6PD	P11413	515 aa		13.38	□□□□□ -0.27
SREBF1-222	ENST00000583732	GGT1	P19440	569 aa		13.38	□□□□□ -0.27
SREBF1-222	ENST00000583732	PRPS1L1	P21108	318 aa		13.38	□□□□□ -0.27
SREBF1-222	ENST00000583732	DIO1	P49895	249 aa		13.38	□□□□□ -0.27
SREBF1-222	ENST00000583732	SESN3	P58005	492 aa		13.38	□□□□□ -0.27
SREBF1-222	ENST00000583732	SPOCK1	Q08629	439 aa		13.38	□□□□□ -0.27
SREBF1-222	ENST00000583732	OR4F3	Q6IEY1	312 aa		13.38	□□□□□ -0.27
SREBF1-222	ENST00000583732	HMBOX1	Q6NT76	420 aa		13.38	□□□□□ -0.27
SREBF1-222	ENST00000583732	C16orf62	Q7Z3J2	963 aa		13.38	□□□□□ -0.27
SREBF1-222	ENST00000583732	GALNT5	Q7Z7M9	940 aa		13.38	□□□□□ -0.27
SREBF1-222	ENST00000583732	HMGN2P46	Q86SG4	172 aa		13.38	□□□□□ -0.27
SREBF1-222	ENST00000583732	UBE2J2	Q8N2K1	259 aa		13.38	□□□□□ -0.27
SREBF1-222	ENST00000583732	TCP10L	Q8TDR4	215 aa		13.38	□□□□□ -0.27
SREBF1-222	ENST00000583732	LAT2	Q9GZY6	243 aa		13.38	□□□□□ -0.27
SREBF1-222	ENST00000583732	SERINC1	Q9NRX5	453 aa		13.38	□□□□□ -0.27
SREBF1-222	ENST00000583732		A0A1W2PR80	420 aa		13.37	□□□□□ -0.27
SREBF1-222	ENST00000583732	SULT2B1	O00204	365 aa		13.37	□□□□□ -0.27
SREBF1-222	ENST00000583732	STX11	O75558	287 aa		13.37	□□□□□ -0.27
SREBF1-222	ENST00000583732	UGT2B17	O75795	530 aa		13.37	□□□□□ -0.27
SREBF1-222	ENST00000583732	PGC	P20142	388 aa		13.37	□□□□□ -0.27
SREBF1-222	ENST00000583732	COX5A	P20674	150 aa		13.37	□□□□□ -0.27
SREBF1-222	ENST00000583732	ZNF141	Q15928	474 aa		13.37	□□□□□ -0.27
SREBF1-222	ENST00000583732	SYT14P1	Q58G82	188 aa		13.37	□□□□□ -0.27
SREBF1-222	ENST00000583732	TIMM23B	Q5SRD1	257 aa		13.37	□□□□□ -0.27
SREBF1-222	ENST00000583732	BHLHB9	Q6PI77	547 aa		13.37	□□□□□ -0.27
SREBF1-222	ENST00000583732	HOMEZ	Q8IX15	550 aa		13.37	□□□□□ -0.27
SREBF1-222	ENST00000583732	RIMKLA	Q8IXN7	391 aa		13.37	□□□□□ -0.27
SREBF1-222	ENST00000583732	OR4A15	Q8NGL6	344 aa		13.37	□□□□□ -0.27
SREBF1-222	ENST00000583732	OR52N5	Q8NH56	324 aa		13.37	□□□□□ -0.27
SREBF1-222	ENST00000583732	ZNF563	Q8TA94	476 aa		13.37	□□□□□ -0.27
SREBF1-222	ENST00000583732	ST8SIA1	Q92185	356 aa		13.37	□□□□□ -0.27
SREBF1-222	ENST00000583732	ZNF75CP	Q92670	426 aa	Predicted RBP	13.37	□□□□□ -0.27
SREBF1-222	ENST00000583732	USB1	Q9BQ65	265 aa	Known RBP	13.37	□□□□□ -0.27
SREBF1-222	ENST00000583732	NMUR2	Q9GZQ4	415 aa		13.37	□□□□□ -0.27
SREBF1-222	ENST00000583732	OR51I1	Q9H343	314 aa		13.37	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms