RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 PSMB1P20618 241 aaKnown RBP6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 IL12BP29460 328 aa6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 TIA1P31483 386 aaKnown RBP eCLIP6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 STX2P32856 288 aa6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 DEKP35659 375 aaKnown RBP6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 IRX1P78414 480 aaPredicted RBP6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 BSPH1Q075Z2 132 aa6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 IFT88Q13099 833 aa6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 NAB1Q13506 487 aa6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 PIN1Q13526 163 aaPredicted RBP6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 NFYCQ13952 458 aa6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 EFR3AQ14156 821 aa6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 TAB1Q15750 504 aa6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 UAP1Q16222 522 aaPredicted RBP6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 NDUFAF6Q330K2 333 aa6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 NCMAPQ5T1S8 102 aa6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 TTC19Q6DKK2 380 aaPredicted RBP6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 FAM71E1Q6IPT2 247 aa6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 C11orf71Q6IPW1 123 aa6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 ANKRD26P1Q6NSI1 321 aa6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 ADAM5Q6NVV9 412 aa6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 B3GLCTQ6Y288 498 aa6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 IL17RELQ6ZVW7 336 aa6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 ZNF551Q7Z340 670 aaPredicted RBP6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 OR2L13Q8N349 312 aa6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 OR6K3Q8NGY3 331 aa6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 FBXO30Q8TB52 745 aa6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 TMEM171Q8WVE6 324 aa6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 CFHR4Q92496 578 aa6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 GCDHQ92947 438 aaPredicted RBP6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 SLC7A6OSQ96CW6 309 aaPredicted RBP6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 GIMAP5Q96F15 307 aa6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 RNF145Q96MT1 663 aa6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 LMF2Q9BU23 707 aaKnown RBP6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 TRAF4Q9BUZ4 470 aaPredicted RBP6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 TRIM2Q9C040 744 aa6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 ELOVL6Q9H5J4 265 aa6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 BRF2Q9HAW0 419 aa6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 FAM120CQ9NX05 1096 aaKnown RBP6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 C19orf53Q9UNZ5 99 aaPredicted RBP6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 LIPT1Q9Y234 373 aa6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 CFL2Q9Y281 166 aa6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 CCL27Q9Y4X3 112 aa6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 MEGF8Q7Z7M0 2845 aa6.96□□□□□ -1.3
PPP4R1-225ENST00000583438 NPIPA5A0A0B4J1W7 369 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 NPIPA7E9PJI5 369 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 NPIPB8E9PQR5 432 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 ADAMDEC1O15204 470 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 LY6HO94772 140 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 OXSR1O95747 527 aaPredicted RBP6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 IL33O95760 270 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 ANGPTL1O95841 491 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 LINGO3P0C6S8 592 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 NPIPA8P0DM63 369 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 EFNA1P20827 205 aaPredicted RBP6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 TYK2P29597 1187 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 RFX3P48380 749 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 PRIM2P49643 509 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 FOXG1P55316 489 aaPredicted RBP6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 C21orf58P58505 322 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 RPS4XP62701 263 aaKnown RBP6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 BTKQ06187 659 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 CSTF3Q12996 717 aaKnown RBP6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 MALLQ13021 153 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 TOMM34Q15785 309 aaPredicted RBP6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 ZNF239Q16600 458 aaKnown RBP6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 KRTAP19-4Q3LI73 84 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 ZNF672Q499Z4 452 aaPredicted RBP6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 ZNF678Q5SXM1 525 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 C6orf52Q5T4I8 152 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 CCNJQ5T5M9 372 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 C6orf163Q5TEZ5 329 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 METTL2BQ6P1Q9 378 aaKnown RBP6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 PAGE2Q7Z2X7 111 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 FAM9CQ8IZT9 166 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 CEP112Q8N8E3 955 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 RNF128Q8TEB7 428 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 ATP6V1E2Q96A05 226 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 CIDECQ96AQ7 238 aaPredicted RBP6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 ELP4Q96EB1 424 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 GMPPAQ96IJ6 420 aaPredicted RBP6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 AMDHD1Q96NU7 426 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 KRTAP4-12Q9BQ66 201 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 SLC39A3Q9BRY0 314 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 FUT8Q9BYC5 575 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 CDC42EP4Q9H3Q1 356 aaKnown RBP6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 GSTO2Q9H4Y5 243 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 ZCCHC4Q9H5U6 513 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 EQTNQ9NQ60 294 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 YAE1D1Q9NRH1 226 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 ING3Q9NXR8 418 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 TMEM216Q9P0N5 145 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 VPS29Q9UBQ0 182 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 EMCNQ9ULC0 261 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 ZNF780BQ9Y6R6 833 aa6.95□□□□□ -1.3
PPP4R1-225ENST00000583438 IGHV3-15A0A0B4J1V0 119 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 CENPVL1A0A0U1RR11 272 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 A0A1W2PRB8 838 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms