RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 ANPEPP15144 967 aa14.86□□□□□ -0.03
CDK5RAP3-228ENST00000583363 ELAVL4P26378 380 aaKnown RBP14.86□□□□□ -0.03
CDK5RAP3-228ENST00000583363 CCR4P51679 360 aa14.86□□□□□ -0.03
CDK5RAP3-228ENST00000583363 HMGA2P52926 109 aa14.86□□□□□ -0.03
CDK5RAP3-228ENST00000583363 TAS2R41P59536 307 aa14.86□□□□□ -0.03
CDK5RAP3-228ENST00000583363 COPZ1P61923 177 aa14.86□□□□□ -0.03
CDK5RAP3-228ENST00000583363 RCN1Q15293 331 aa14.86□□□□□ -0.03
CDK5RAP3-228ENST00000583363 TOMM34Q15785 309 aaPredicted RBP14.86□□□□□ -0.03
CDK5RAP3-228ENST00000583363 WBP2NLQ6ICG8 309 aa14.86□□□□□ -0.03
CDK5RAP3-228ENST00000583363 ZNF613Q6PF04 617 aa14.86□□□□□ -0.03
CDK5RAP3-228ENST00000583363 AMIGO2Q86SJ2 522 aa14.86□□□□□ -0.03
CDK5RAP3-228ENST00000583363 RBMXL3Q8N7X1 1067 aaKnown RBP14.86□□□□□ -0.03
CDK5RAP3-228ENST00000583363 TMEM178AQ8NBL3 297 aa14.86□□□□□ -0.03
CDK5RAP3-228ENST00000583363 PIK3C3Q8NEB9 887 aa14.86□□□□□ -0.03
CDK5RAP3-228ENST00000583363 OR4K17Q8NGC6 315 aa14.86□□□□□ -0.03
CDK5RAP3-228ENST00000583363 ADAMTS16Q8TE57 1224 aa14.86□□□□□ -0.03
CDK5RAP3-228ENST00000583363 JSRP1Q96MG2 331 aaPredicted RBP14.86□□□□□ -0.03
CDK5RAP3-228ENST00000583363 ADAM19Q9H013 955 aa14.86□□□□□ -0.03
CDK5RAP3-228ENST00000583363 NMNAT1Q9HAN9 279 aaPredicted RBP14.86□□□□□ -0.03
CDK5RAP3-228ENST00000583363 NTN4Q9HB63 628 aa14.86□□□□□ -0.03
CDK5RAP3-228ENST00000583363 ZFP64Q9NPA5 681 aa14.86□□□□□ -0.03
CDK5RAP3-228ENST00000583363 CTPS2Q9NRF8 586 aa14.86□□□□□ -0.03
CDK5RAP3-228ENST00000583363 AGPAT4Q9NRZ5 378 aa14.86□□□□□ -0.03
CDK5RAP3-228ENST00000583363 ACER3Q9NUN7 267 aa14.86□□□□□ -0.03
CDK5RAP3-228ENST00000583363 STX18Q9P2W9 335 aaKnown RBP14.86□□□□□ -0.03
CDK5RAP3-228ENST00000583363 RIMS3Q9UJD0 308 aa14.86□□□□□ -0.03
CDK5RAP3-228ENST00000583363 TNRC6AQ8NDV7 1962 aaKnown RBP14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 A0A1B0GWA3 101 aa14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 TRAPPC13A5PLN9 417 aa14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 LRRC3CA6NJW4 275 aa14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 DEAF1O75398 565 aaPredicted RBP14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 LYPD3O95274 346 aa14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 NUDT14O95848 222 aa14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 LDLRP01130 860 aa14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 FUT4P22083 530 aa14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 IFNA8P32881 189 aa14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 DLX5P56178 289 aa14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 QPRTQ15274 297 aa14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 ARSKQ6UWY0 536 aa14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 Q6ZS92 163 aa14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 PLEKHM3Q6ZWE6 761 aa14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 GDF7Q7Z4P5 450 aa14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 PQLC1Q8N2U9 271 aa14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 CADM2Q8N3J6 435 aa14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 ZNF563Q8TA94 476 aa14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 C1GALT1C1Q96EU7 318 aa14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 SLC41A3Q96GZ6 507 aa14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 CENPNQ96H22 339 aaPredicted RBP14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 DHRS1Q96LJ7 313 aa14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 ZNF597Q96LX8 424 aa14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 FNDC11Q9BVV2 318 aa14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 SLC25A18Q9H1K4 315 aa14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 PTGES2Q9H7Z7 377 aa14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 TAS2R10Q9NYW0 307 aa14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 C6orf203Q9P0P8 240 aaPredicted RBP14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 RHCGQ9UBD6 479 aa14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 NKX1-2Q9UD57 310 aaPredicted RBP14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 BOKQ9UMX3 212 aaPredicted RBP14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 TESMINQ9Y4I5 508 aa14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 FLNCQ14315 2725 aa14.85□□□□□ -0.03
CDK5RAP3-228ENST00000583363 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 A0A0B4J2E0 115 aa14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 A0A1B0GX12 115 aa14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 ETV2O00321 342 aaPredicted RBP14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 GNGT2O14610 69 aa14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 CDC40O60508 579 aaKnown RBP eCLIP14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 ATP6V1G2O95670 118 aa14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 H1F0P07305 194 aaKnown RBP14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 THRBP10828 461 aa14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 GP1BBP13224 206 aa14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 MST1P26927 711 aa14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 RRM2P31350 389 aa14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 SLC1A3P43003 542 aa14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 MEOX1P50221 254 aa14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 CDH12P55289 794 aa14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 DSCR4P56555 118 aaPredicted RBP14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 SESN3P58005 492 aa14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 SMIM11AP58511 58 aa14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 TLE1Q04724 770 aa14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 ST3GAL3Q11203 375 aa14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 KCNAB2Q13303 367 aa14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 GANABQ14697 944 aaKnown RBP14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 HYAL4Q2M3T9 481 aa14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 ULK3Q6PHR2 472 aa14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 OFCC1Q8IZS5 231 aa14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 DNAJA4Q8WW22 397 aaPredicted RBP14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 BDH2Q9BUT1 245 aa14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 SEMA6AQ9H2E6 1030 aa14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 ADNPQ9H2P0 1102 aa14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 RNPEPL1Q9HAU8 725 aa14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 MED17Q9NVC6 651 aa14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 RPS6KB2Q9UBS0 482 aa14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 TUBD1Q9UJT1 453 aa14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 C15orf41Q9Y2V0 281 aa14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 MRPS18CQ9Y3D5 142 aaKnown RBP14.84□□□□□ -0.03
CDK5RAP3-228ENST00000583363 A0A087WZY1 265 aa14.83□□□□□ -0.04
CDK5RAP3-228ENST00000583363 A0A1W2PRQ8 180 aa14.83□□□□□ -0.04
CDK5RAP3-228ENST00000583363 ADAMDEC1O15204 470 aa14.83□□□□□ -0.04
CDK5RAP3-228ENST00000583363 ZIC3O60481 467 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms