RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 VPS26BQ4G0F5 336 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 ZNF789Q5FWF6 425 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 LCE3AQ5TA76 89 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 ZNF470Q6ECI4 717 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 GLYATQ6IB77 296 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 TMEM211Q6ICI0 200 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 SULT1C3Q6IMI6 304 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 ETFRF1Q6IPR1 90 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 DLEU7Q6UYE1 221 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 RNF165Q6ZSG1 346 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 CCDC80Q76M96 950 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 PTAR1Q7Z6K3 402 aaPredicted RBP3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 MCEMP1Q8IX19 187 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 LGI2Q8N0V4 545 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 UMODL1-AS1Q8N2C9 162 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 PARP8Q8N3A8 854 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 SVOPLQ8N434 492 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 ZNF611Q8N823 705 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 OR9I1Q8NGQ6 314 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 RHOXF1Q8NHV9 184 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 FAM110BQ8TC76 370 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 MAGEE2Q8TD90 523 aaPredicted RBP3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 CYGBQ8WWM9 190 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 GIMAP5Q96F15 307 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 IMP4Q96G21 291 aaKnown RBP3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 GFI1Q99684 422 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 SEPT5Q99719 369 aaPredicted RBP3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 APOL2Q9BQE5 337 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 DCUN1D5Q9BTE7 237 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 FICDQ9BVA6 458 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 UGT2B28Q9BY64 529 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 ULBP1Q9BZM6 244 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 NAA50Q9GZZ1 169 aaKnown RBP3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 TUBB1Q9H4B7 451 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 DUSP21Q9H596 190 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 SP140LQ9H930 580 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 FANCEQ9HB96 536 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 PARVBQ9HBI1 364 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 SYTL2Q9HCH5 934 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 HMG20AQ9NP66 347 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 AIG1Q9NVV5 245 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 RBM22Q9NW64 420 aaKnown RBP eCLIP3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 PAK1IP1Q9NWT1 392 aaPredicted RBP3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 ANKMY1Q9P2S6 941 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 SLC2A6Q9UGQ3 507 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 ENPP5Q9UJA9 477 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 LEF1Q9UJU2 399 aaPredicted RBP3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 CDH9Q9ULB4 789 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 RABL2BQ9UNT1 228 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 NEU3Q9UQ49 428 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 AURKCQ9UQB9 309 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 HSPE1-MOB4S4R3N1 261 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 IGLV7-46A0A075B6I9 117 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 IGHV4-4A0A075B6R2 117 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 LOC100130705A0A1B0GUX0 176 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 ATP6AP2A0A1C7CYW4 349 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 A0A1W2PR77 199 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 OR2M5A3KFT3 312 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 FAM149AA5PLN7 773 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 SYCE1LA8MT33 242 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 ZNF99A8MXY4 864 aaPredicted RBP3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 PRR32B1ATL7 298 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 G3V2T6 193 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 TMX2-CTNND1H3BSU7 103 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 CLDN5O00501 218 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 PFDN6O15212 129 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 INPP4BO15327 924 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 PI15O43692 258 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 DPM1O60762 260 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 ZNF217O75362 1048 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 ATP6AP2O75787 350 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 GABARAPO95166 117 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 SCELO95171 688 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 CELF2O95319 508 aaKnown RBP3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 SIX3O95343 332 aaPredicted RBP3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 DUS4LO95620 317 aaKnown RBP3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 RAF1P04049 648 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 GBAP04062 536 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 HIST1H2ABP04908 130 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 RPS17P08708 135 aaKnown RBP3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 HTR1AP08908 422 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 TFPTP0C1Z6 253 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 THRBP10828 461 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 GGT1P19440 569 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 HIST1H2ADP20671 130 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 OGNP20774 298 aaKnown RBP3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 ACHEP22303 614 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 JAK1P23458 1154 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 DNASE1P24855 282 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 CD40LGP29965 261 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 OXTRP30559 389 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 RPL9P32969 192 aaKnown RBP3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 SHMT2P34897 504 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 PCGF2P35227 344 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 UGT2B10P36537 528 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 CASP3P42574 277 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 TMED10P49755 219 aaKnown RBP3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 POLR2JP52435 117 aaKnown RBP3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 CDKN2DP55273 166 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 HUNKP57058 714 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms