RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 HMGN2P46Q86SG4 172 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 CARM1Q86X55 608 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 PAPD5Q8NDF8 572 aaKnown RBP9.43□□□□□ -0.9
CCDC47-203ENST00000580986 FAM83FQ8NEG4 500 aaPredicted RBP9.43□□□□□ -0.9
CCDC47-203ENST00000580986 OR6T1Q8NGN1 323 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 FAR1Q8WVX9 515 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 DNAJA4Q8WW22 397 aaPredicted RBP9.43□□□□□ -0.9
CCDC47-203ENST00000580986 SH3YL1Q96HL8 342 aaPredicted RBP9.43□□□□□ -0.9
CCDC47-203ENST00000580986 TPD52L3Q96J77 140 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 C7orf34Q96L11 122 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 JSRP1Q96MG2 331 aaPredicted RBP9.43□□□□□ -0.9
CCDC47-203ENST00000580986 PIGQQ9BRB3 760 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 ADAM19Q9H013 955 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 ACER3Q9NUN7 267 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 DKKL1Q9UK85 242 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 ACAD8Q9UKU7 415 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 SH3GLB1Q9Y371 365 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 DHRS12A0PJE2 317 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 C17orf51A8MQB3 221 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 TPST2O60704 377 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 OR5F1O95221 314 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 NUDT14O95848 222 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 ACTL6AO96019 429 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 RAP2AP10114 183 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 PNMTP11086 282 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 PRG2P13727 222 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 MST1P26927 711 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 IFNA8P32881 189 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 GCKP35557 465 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 CLK1P49759 484 aaKnown RBP9.42□□□□□ -0.9
CCDC47-203ENST00000580986 MMP16P51512 607 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 CCR4P51679 360 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 TDGF1P3P51864 188 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 GFRA1P56159 465 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 SESN3P58005 492 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 GK3PQ14409 553 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 QPRTQ15274 297 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 NPTX1Q15818 432 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 BCL2A1Q16548 175 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 NDUFAF6Q330K2 333 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 IQCCQ4KMZ1 466 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 FAM98BQ52LJ0 330 aaKnown RBP9.42□□□□□ -0.9
CCDC47-203ENST00000580986 CMPK2Q5EBM0 449 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 AAGABQ6PD74 315 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 ULK3Q6PHR2 472 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 C5orf46Q6UWT4 87 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 CYP2R1Q6VVX0 501 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 VTCN1Q7Z7D3 282 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 ADGRG5Q8IZF4 528 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 FAM86B1Q8N7N1 296 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 OR4D11Q8NGI4 311 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 NEIL3Q8TAT5 605 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 SLC25A43Q8WUT9 341 aaPredicted RBP9.42□□□□□ -0.9
CCDC47-203ENST00000580986 SNRNP40Q96DI7 357 aaKnown RBP9.42□□□□□ -0.9
CCDC47-203ENST00000580986 MPP4Q96JB8 637 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 PRRC1Q96M27 445 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 GPR137Q96N19 417 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 ZNF347Q96SE7 839 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 REPIN1Q9BWE0 567 aaKnown RBP9.42□□□□□ -0.9
CCDC47-203ENST00000580986 ANKRD19PQ9H560 264 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 YY1AP1Q9H869 796 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 TMEM27Q9HBJ8 222 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 NDUFAF4Q9P032 175 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 STOML1Q9UBI4 398 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 ENPP4Q9Y6X5 453 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 NCKAP5O14513 1909 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 SPTA1P02549 2419 aa9.42□□□□□ -0.9
CCDC47-203ENST00000580986 KALRNO60229 2985 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 A0A0B4J2E0 115 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 A0A1B0GX12 115 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 TRAPPC13A5PLN9 417 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 HTR3EA5X5Y0 456 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 M0R3H8 397 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 AQP7O14520 342 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 ZNF208O43345 1280 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 CHP2O43745 196 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 SEMA7AO75326 666 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 CYP7B1O75881 506 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 PRSS23O95084 383 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 IGF2P01344 180 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 GKN3PP0CG01 181 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 GP1BBP13224 206 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 RHCEP18577 417 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 HK1P19367 917 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 HTR2AP28223 471 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 IDH2P48735 452 aaKnown RBP9.41□□□□□ -0.9
CCDC47-203ENST00000580986 POLR2HP52434 150 aaKnown RBP9.41□□□□□ -0.9
CCDC47-203ENST00000580986 B3GALT5-AS1P59052 145 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 VLDLRP98155 873 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 PMP22Q01453 160 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 CHRNB3Q05901 458 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 SELENBP1Q13228 472 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.41□□□□□ -0.99e-9■□□□□ 9.8
CCDC47-203ENST00000580986 ENTPD8Q5MY95 495 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 C3orf33Q6P1S2 294 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 ARHGAP11AQ6P4F7 1023 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 ENPP6Q6UWR7 440 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 ARSKQ6UWY0 536 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 PLEKHM3Q6ZWE6 761 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 TRILQ7L0X0 811 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms