RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 ASB6Q9NWX5 421 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 AHSPQ9NZD4 102 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 MALT1Q9UDY8 824 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 OPN4Q9UHM6 478 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 AMDHD2Q9Y303 409 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 CORINQ9Y5Q5 1042 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 TEX264Q9Y6I9 313 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 IGKV3D-15A0A087WSY6 115 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 A0A087WV62 115 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 LOC100653049A0A140TA62 436 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 ZNF716A6NP11 495 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 hCG_2039718K7EN88 272 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 UPK1AO00322 258 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 KLF11O14901 512 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 PIN1P1O15428 100 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 ICMTO60725 284 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 COQ9O75208 318 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 KRT34O76011 436 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 H6PDO95479 791 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 PRB2P02812 416 aaPredicted RBP6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 RNASE1P07998 156 aaKnown RBP6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 NGFRP08138 427 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 IL3P08700 152 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 OMGP23515 440 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 CALCRP30988 508 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 CXCR5P32302 372 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 MAP3K8P41279 467 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 EIF1P41567 113 aaKnown RBP6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 GPR6P46095 362 aaPredicted RBP6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 SLC12A2P55011 1212 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 KRTAP10-3P60369 221 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 ZP4Q12836 540 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 GTF2H2Q13888 395 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 SLC29A2Q14542 456 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 TOMM34Q15785 309 aaPredicted RBP6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 ADRM1Q16186 407 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 GLE1Q53GS7 698 aaKnown RBP6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 FRG2Q64ET8 278 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 ABLIM2Q6H8Q1 611 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 GTF2H2CQ6P1K8 395 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 TMEM107Q6UX40 140 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 CDK20Q8IZL9 346 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 FAM9CQ8IZT9 166 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 C17orf78Q8N4C9 275 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 TEX29Q8N6K0 151 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 SLC16A11Q8NCK7 471 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 B4GALNT2Q8NHY0 566 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 NANPQ8TBE9 248 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 STAG3L4Q8TBR4 150 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 MAGOHBQ96A72 148 aaKnown RBP6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 APH1AQ96BI3 265 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 FRG2BQ96QU4 278 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 CCT8L2Q96SF2 557 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 CITED1Q99966 193 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 FAIM2Q9BWQ8 316 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 TPK1Q9H3S4 243 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 SEC61A2Q9H9S3 476 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 Q9N2J8 555 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 RNF14Q9UBS8 474 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 C19orf53Q9UNZ5 99 aaPredicted RBP6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 SLC12A4Q9UP95 1085 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 ANGPTL3Q9Y5C1 460 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 MMP24Q9Y5R2 645 aa6.61□□□□□ -1.35
SMARCE1-217ENST00000580654 COL7A1Q02388 2944 aa6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 WNK2Q9Y3S1 2297 aa6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 RYR2Q92736 4967 aa6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 SH3PXD2BA1X283 911 aa6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 GJE1A6NN92 205 aa6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 CXorf49A8MYA2 514 aaPredicted RBP6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 DNALI1O14645 258 aaPredicted RBP6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 PLPP2O43688 288 aa6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 DEAF1O75398 565 aaPredicted RBP6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 HPXP02790 462 aa6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 GABRA3P34903 492 aa6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 THBS4P35443 961 aa6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 PSMD4P55036 377 aaKnown RBP6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 TRA2BP62995 288 aaKnown RBP6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 RAE1P78406 368 aaKnown RBP6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 ZNF117Q03924 483 aa6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 HGFACQ04756 655 aa6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 ZNHIT3Q15649 155 aaPredicted RBP6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 BEAN1Q3B7T3 259 aa6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 SGO1Q5FBB7 561 aa6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 ASPHD2Q6ICH7 369 aa6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 CCDC137Q6PK04 289 aaKnown RBP6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 CBLN3Q6UW01 205 aa6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 RELL1Q8IUW5 271 aa6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 ANKMY2Q8IV38 441 aa6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 BCL6BQ8N143 479 aaPredicted RBP6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 OR2L13Q8N349 312 aa6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 C1orf52Q8N6N3 182 aaKnown RBP6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 C1orf162Q8NEQ5 155 aaPredicted RBP6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 HOXB13Q92826 284 aaPredicted RBP6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 YIPF5Q969M3 257 aa6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 SLC38A2Q96QD8 506 aa6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 GPR22Q99680 433 aa6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 RBM4BQ9BQ04 359 aaKnown RBP6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 KATNB1Q9BVA0 655 aa6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 NOL11Q9H8H0 719 aaKnown RBP6.6□□□□□ -1.35
SMARCE1-217ENST00000580654 ZMAT3Q9HA38 289 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms