RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.74■□□□□ 0.27
PPP4R1-215ENST00000580182 ANGPT2O15123 496 aa16.73■□□□□ 0.27
PPP4R1-215ENST00000580182 KIR2DL2P43627 348 aaPredicted RBP16.73■□□□□ 0.27
PPP4R1-215ENST00000580182 SIRPAP78324 504 aa16.73■□□□□ 0.27
PPP4R1-215ENST00000580182 MERTKQ12866 999 aa16.73■□□□□ 0.27
PPP4R1-215ENST00000580182 SELPLGQ14242 412 aa16.73■□□□□ 0.27
PPP4R1-215ENST00000580182 RUNDC3AQ59EK9 446 aa16.73■□□□□ 0.27
PPP4R1-215ENST00000580182 OR2A2Q6IF42 318 aa16.73■□□□□ 0.27
PPP4R1-215ENST00000580182 PLEKHM3Q6ZWE6 761 aa16.73■□□□□ 0.27
PPP4R1-215ENST00000580182 DHDDSQ86SQ9 333 aa16.73■□□□□ 0.27
PPP4R1-215ENST00000580182 CMIPQ8IY22 773 aa16.73■□□□□ 0.27
PPP4R1-215ENST00000580182 PEX5LQ8IYB4 626 aa16.73■□□□□ 0.27
PPP4R1-215ENST00000580182 CNEP1R1Q8N9A8 125 aa16.73■□□□□ 0.27
PPP4R1-215ENST00000580182 ZNF563Q8TA94 476 aa16.73■□□□□ 0.27
PPP4R1-215ENST00000580182 ST8SIA1Q92185 356 aa16.73■□□□□ 0.27
PPP4R1-215ENST00000580182 PMM1Q92871 262 aa16.73■□□□□ 0.27
PPP4R1-215ENST00000580182 RNASE6Q93091 150 aaKnown RBP16.73■□□□□ 0.27
PPP4R1-215ENST00000580182 STARD4Q96DR4 205 aa16.73■□□□□ 0.27
PPP4R1-215ENST00000580182 CPPED1Q9BRF8 314 aaPredicted RBP16.73■□□□□ 0.27
PPP4R1-215ENST00000580182 SRXN1Q9BYN0 137 aa16.73■□□□□ 0.27
PPP4R1-215ENST00000580182 PRRG4Q9BZD6 226 aa16.73■□□□□ 0.27
PPP4R1-215ENST00000580182 COQ10BQ9H8M1 238 aa16.73■□□□□ 0.27
PPP4R1-215ENST00000580182 ACER3Q9NUN7 267 aa16.73■□□□□ 0.27
PPP4R1-215ENST00000580182 THUMPD1Q9NXG2 353 aaKnown RBP16.73■□□□□ 0.27
PPP4R1-215ENST00000580182 CALML5Q9NZT1 146 aa16.73■□□□□ 0.27
PPP4R1-215ENST00000580182 CLEC4AQ9UMR7 237 aa16.73■□□□□ 0.27
PPP4R1-215ENST00000580182 CHST2Q9Y4C5 530 aa16.73■□□□□ 0.27
PPP4R1-215ENST00000580182 FBN2P35556 2912 aa16.73■□□□□ 0.27
PPP4R1-215ENST00000580182 A0A0G2JPF8 293 aa16.72■□□□□ 0.27
PPP4R1-215ENST00000580182 A0A1W2PNR3 127 aa16.72■□□□□ 0.27
PPP4R1-215ENST00000580182 TMEM247A6NEH6 219 aa16.72■□□□□ 0.27
PPP4R1-215ENST00000580182 HNRNPCL2B2RXH8 293 aa16.72■□□□□ 0.27
PPP4R1-215ENST00000580182 HNRNPCL3B7ZW38 293 aa16.72■□□□□ 0.27
PPP4R1-215ENST00000580182 FBP2O00757 339 aa16.72■□□□□ 0.27
PPP4R1-215ENST00000580182 HNRNPCL1O60812 293 aaKnown RBP16.72■□□□□ 0.27
PPP4R1-215ENST00000580182 HNRNPCL4P0DMR1 293 aa16.72■□□□□ 0.27
PPP4R1-215ENST00000580182 IDH2P48735 452 aaKnown RBP16.72■□□□□ 0.27
PPP4R1-215ENST00000580182 CARD18P57730 90 aa16.72■□□□□ 0.27
PPP4R1-215ENST00000580182 EEF1A1P68104 462 aaKnown RBP16.72■□□□□ 0.27
PPP4R1-215ENST00000580182 SELENBP1Q13228 472 aa16.72■□□□□ 0.27
PPP4R1-215ENST00000580182 FBXL19-AS1Q494R0 122 aa16.72■□□□□ 0.27
PPP4R1-215ENST00000580182 GCNT6Q5T4J0 391 aa16.72■□□□□ 0.27
PPP4R1-215ENST00000580182 BTLAQ7Z6A9 289 aa16.72■□□□□ 0.27
PPP4R1-215ENST00000580182 CLIP4Q8N3C7 705 aa16.72■□□□□ 0.27
PPP4R1-215ENST00000580182 DPP10Q8N608 796 aa16.72■□□□□ 0.27
PPP4R1-215ENST00000580182 NFKBIDQ8NI38 313 aa16.72■□□□□ 0.27
PPP4R1-215ENST00000580182 C10orf82Q8WW14 230 aa16.72■□□□□ 0.27
PPP4R1-215ENST00000580182 TMEM234Q8WY98 164 aa16.72■□□□□ 0.27
PPP4R1-215ENST00000580182 ROBO4Q8WZ75 1007 aa16.72■□□□□ 0.27
PPP4R1-215ENST00000580182 RSPO3Q9BXY4 272 aaPredicted RBP16.72■□□□□ 0.27
PPP4R1-215ENST00000580182 SAR1AQ9NR31 198 aa16.72■□□□□ 0.27
PPP4R1-215ENST00000580182 CTPS2Q9NRF8 586 aa16.72■□□□□ 0.27
PPP4R1-215ENST00000580182 KLHL14Q9P2G3 628 aa16.72■□□□□ 0.27
PPP4R1-215ENST00000580182 ZNF443Q9Y2A4 671 aaPredicted RBP16.72■□□□□ 0.27
PPP4R1-215ENST00000580182 GMEB1Q9Y692 573 aa16.72■□□□□ 0.27
PPP4R1-215ENST00000580182 ITPR2Q14571 2701 aa16.71■□□□□ 0.27
PPP4R1-215ENST00000580182 CDHR4A6H8M9 788 aa16.71■□□□□ 0.27
PPP4R1-215ENST00000580182 PGM3O95394 542 aa16.71■□□□□ 0.27
PPP4R1-215ENST00000580182 SYNGR4O95473 234 aa16.71■□□□□ 0.27
PPP4R1-215ENST00000580182 GKN3PP0CG01 181 aa16.71■□□□□ 0.27
PPP4R1-215ENST00000580182 ARAFP10398 606 aa16.71■□□□□ 0.27
PPP4R1-215ENST00000580182 GPX2P18283 190 aa16.71■□□□□ 0.27
PPP4R1-215ENST00000580182 PPIBP23284 216 aaKnown RBP16.71■□□□□ 0.27
PPP4R1-215ENST00000580182 KLF10Q13118 480 aa16.71■□□□□ 0.27
PPP4R1-215ENST00000580182 GNA13Q14344 377 aa16.71■□□□□ 0.27
PPP4R1-215ENST00000580182 GUSBP1Q15486 140 aa16.71■□□□□ 0.27
PPP4R1-215ENST00000580182 LIN52Q52LA3 116 aa16.71■□□□□ 0.27
PPP4R1-215ENST00000580182 PDSS1Q5T2R2 415 aa16.71■□□□□ 0.27
PPP4R1-215ENST00000580182 TSPEARQ8WU66 669 aa16.71■□□□□ 0.27
PPP4R1-215ENST00000580182 CCDC106Q9BWC9 280 aa16.71■□□□□ 0.27
PPP4R1-215ENST00000580182 BCL2L10Q9HD36 194 aa16.71■□□□□ 0.27
PPP4R1-215ENST00000580182 PAQR5Q9NXK6 330 aaPredicted RBP16.71■□□□□ 0.27
PPP4R1-215ENST00000580182 PACSIN3Q9UKS6 424 aa16.71■□□□□ 0.27
PPP4R1-215ENST00000580182 MCTS1Q9ULC4 181 aaKnown RBP16.71■□□□□ 0.27
PPP4R1-215ENST00000580182 DCHS2Q6V1P9 2916 aa16.71■□□□□ 0.27
PPP4R1-215ENST00000580182 GJE1A6NN92 205 aa16.7■□□□□ 0.26
PPP4R1-215ENST00000580182 EVPLLA8MZ36 301 aa16.7■□□□□ 0.26
PPP4R1-215ENST00000580182 C5orf58C9J3I9 102 aa16.7■□□□□ 0.26
PPP4R1-215ENST00000580182 SMNDC1O75940 238 aaKnown RBP eCLIP16.7■□□□□ 0.266e-7■■□□□ 13.7
PPP4R1-215ENST00000580182 CRHP06850 196 aa16.7■□□□□ 0.26
PPP4R1-215ENST00000580182 FCGR2AP12318 317 aa16.7■□□□□ 0.26
PPP4R1-215ENST00000580182 CCNA2P20248 432 aa16.7■□□□□ 0.26
PPP4R1-215ENST00000580182 MTPNP58546 118 aa16.7■□□□□ 0.26
PPP4R1-215ENST00000580182 EPS8Q12929 822 aa16.7■□□□□ 0.26
PPP4R1-215ENST00000580182 NFYCQ13952 458 aa16.7■□□□□ 0.26
PPP4R1-215ENST00000580182 CAPRIN1Q14444 709 aaKnown RBP16.7■□□□□ 0.26
PPP4R1-215ENST00000580182 ADRM1Q16186 407 aa16.7■□□□□ 0.26
PPP4R1-215ENST00000580182 ZNF239Q16600 458 aaKnown RBP16.7■□□□□ 0.26
PPP4R1-215ENST00000580182 C3orf33Q6P1S2 294 aa16.7■□□□□ 0.26
PPP4R1-215ENST00000580182 GDF7Q7Z4P5 450 aa16.7■□□□□ 0.26
PPP4R1-215ENST00000580182 BBS10Q8TAM1 723 aa16.7■□□□□ 0.26
PPP4R1-215ENST00000580182 DNAJA3Q96EY1 480 aa16.7■□□□□ 0.26
PPP4R1-215ENST00000580182 ANKRD27Q96NW4 1050 aa16.7■□□□□ 0.26
PPP4R1-215ENST00000580182 CGREF1Q99674 301 aa16.7■□□□□ 0.26
PPP4R1-215ENST00000580182 RBM24Q9BX46 236 aaKnown RBP16.7■□□□□ 0.26
PPP4R1-215ENST00000580182 OPN3Q9H1Y3 402 aaPredicted RBP16.7■□□□□ 0.26
PPP4R1-215ENST00000580182 PIGMQ9H3S5 423 aa16.7■□□□□ 0.26
PPP4R1-215ENST00000580182 IGHV3-15A0A0B4J1V0 119 aa16.69■□□□□ 0.26
PPP4R1-215ENST00000580182 CFAP73A6NFT4 308 aa16.69■□□□□ 0.26
PPP4R1-215ENST00000580182 A8MXE2 369 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms