RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 PPP3R2Q96LZ3 170 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 C3orf30Q96M34 536 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 ZNF300Q96RE9 604 aaPredicted RBP9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 REPIN1Q9BWE0 567 aaKnown RBP9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 NMUR2Q9GZQ4 415 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 LAT2Q9GZY6 243 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 PPCSQ9HAB8 311 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 BARX1Q9HBU1 254 aaPredicted RBP9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 FAF1Q9UNN5 650 aaPredicted RBP9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 B3GALT5Q9Y2C3 310 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 IGKV3D-15A0A087WSY6 115 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 SERINC4A6NH21 518 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 ZNF264O43296 627 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 NPHS1O60500 1241 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 FCMRO60667 390 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 PEX11AO75192 247 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 LYPLA1O75608 230 aaPredicted RBP9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 TP53P04637 393 aaPredicted RBP9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 KRT16P08779 473 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 GGT1P19440 569 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 SLC7A1P30825 629 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 ALDH3A1P30838 453 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 ARRB2P32121 409 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 NTF4P34130 210 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 SKP2Q13309 424 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 TP53BP2Q13625 1128 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 CBFBQ13951 182 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 PTGR1Q14914 329 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 PDK3Q15120 406 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 LSM12Q3MHD2 195 aaKnown RBP9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 TIGD2Q4W5G0 525 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 C6orf136Q5SQH8 315 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 PDZK1Q5T2W1 519 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 C11orf71Q6IPW1 123 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 PODNL1Q6PEZ8 512 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 TMPPEQ6ZT21 453 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 DDIASQ8IXT1 998 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 GSPT2Q8IYD1 628 aaKnown RBP9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 C4orf33Q8N1A6 199 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 KRTCAP2Q8N6L1 136 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 ZNF433Q8N7K0 673 aaPredicted RBP9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 EIF1ADQ8N9N8 165 aaKnown RBP9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 TOR1AIP2Q8NFQ8 470 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 MUCL1Q96DR8 90 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 CHMP6Q96FZ7 201 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 RADILQ96JH8 1075 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 OR5B2Q96R09 309 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 OR7D2Q96RA2 312 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 RHOXF2Q9BQY4 288 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 QRSL1Q9H0R6 528 aaKnown RBP9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 SERHL2Q9H4I8 314 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 YAE1D1Q9NRH1 226 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 ACER3Q9NUN7 267 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 MKS1Q9NXB0 559 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 MID2Q9UJV3 735 aa9.4□□□□□ -0.9
CSNK1D-210ENST00000579308 FREM1Q5H8C1 2179 aa9.4□□□□□ -0.91
CSNK1D-210ENST00000579308 ALPK2Q86TB3 2170 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 IGHV4-30-2A0A087WSY4 118 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 CENPVL1A0A0U1RR11 272 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 OR5H1A6NKK0 313 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 E7EQL1 145 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 ABCD4O14678 606 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 GPRIN2O60269 458 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 UBL4AP11441 157 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 PRPS1L1P21108 318 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 PTNP21246 168 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 MAPK1P28482 360 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 DIO1P49895 249 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 CDH11P55287 796 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 SESN3P58005 492 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 HBA1P69905 142 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 IRX1P78414 480 aaPredicted RBP9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 STK11Q15831 433 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 SPDYE7PQ495Y7 208 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 IL23RQ5VWK5 629 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 ABLIM2Q6H8Q1 611 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 C3orf33Q6P1S2 294 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 GALNT5Q7Z7M9 940 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 MTDHQ86UE4 582 aaKnown RBP9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 PHC2Q8IXK0 858 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 OR5D16Q8NGK9 328 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 EPS8L3Q8TE67 593 aaKnown RBP9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 ST8SIA1Q92185 356 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 ARL8AQ96BM9 186 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 MOAP1Q96BY2 351 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 HS6ST2Q96MM7 605 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 RHNO1Q9BSD3 238 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 THUMPD3Q9BV44 507 aaKnown RBP9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 BHLHE41Q9C0J9 482 aaPredicted RBP9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 EML4Q9HC35 981 aaKnown RBP9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 ATAD3AQ9NVI7 634 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 FAIMQ9NVQ4 179 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 BOLA1Q9Y3E2 137 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 SLC25A15Q9Y619 301 aa9.39□□□□□ -0.91
CSNK1D-210ENST00000579308 CHD3Q12873 2000 aaKnown RBP9.38□□□□□ -0.91
CSNK1D-210ENST00000579308 SMIM23A6NLE4 172 aa9.38□□□□□ -0.91
CSNK1D-210ENST00000579308 ELOA3DA6NLF2 546 aaPredicted RBP9.38□□□□□ -0.91
CSNK1D-210ENST00000579308 ZNF716A6NP11 495 aa9.38□□□□□ -0.91
CSNK1D-210ENST00000579308 RNF212BA8MTL3 300 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms