RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 SESN3P58005 492 aa11.11□□□□□ -0.63
CSNK1D-206ENST00000577578 RAC3P60763 192 aa11.11□□□□□ -0.63
CSNK1D-206ENST00000577578 RNPS1Q15287 305 aaKnown RBP11.11□□□□□ -0.63
CSNK1D-206ENST00000577578 GSTA3Q16772 222 aa11.11□□□□□ -0.63
CSNK1D-206ENST00000577578 SLC9B1Q4ZJI4 515 aa11.11□□□□□ -0.63
CSNK1D-206ENST00000577578 GTF2IRD2BQ6EKJ0 949 aa11.11□□□□□ -0.63
CSNK1D-206ENST00000577578 C3orf33Q6P1S2 294 aa11.11□□□□□ -0.63
CSNK1D-206ENST00000577578 MSANTD1Q6ZTZ1 278 aa11.11□□□□□ -0.63
CSNK1D-206ENST00000577578 GTF2IRD2Q86UP8 949 aa11.11□□□□□ -0.63
CSNK1D-206ENST00000577578 RNF130Q86XS8 419 aa11.11□□□□□ -0.63
CSNK1D-206ENST00000577578 TMCO5AQ8N6Q1 288 aa11.11□□□□□ -0.63
CSNK1D-206ENST00000577578 ABHD3Q8WU67 409 aa11.11□□□□□ -0.63
CSNK1D-206ENST00000577578 ZNF75CPQ92670 426 aaPredicted RBP11.11□□□□□ -0.63
CSNK1D-206ENST00000577578 ARL8AQ96BM9 186 aa11.11□□□□□ -0.63
CSNK1D-206ENST00000577578 ZG16BQ96DA0 208 aa11.11□□□□□ -0.63
CSNK1D-206ENST00000577578 C7orf26Q96N11 449 aa11.11□□□□□ -0.63
CSNK1D-206ENST00000577578 TRNT1Q96Q11 434 aaKnown RBP11.11□□□□□ -0.63
CSNK1D-206ENST00000577578 ALPK1Q96QP1 1244 aa11.11□□□□□ -0.63
CSNK1D-206ENST00000577578 OR52B2Q96RD2 323 aa11.11□□□□□ -0.63
CSNK1D-206ENST00000577578 THUMPD3Q9BV44 507 aaKnown RBP11.11□□□□□ -0.63
CSNK1D-206ENST00000577578 SLC38A1Q9H2H9 487 aa11.11□□□□□ -0.63
CSNK1D-206ENST00000577578 EXOSC3Q9NQT5 275 aaKnown RBP11.11□□□□□ -0.63
CSNK1D-206ENST00000577578 ACER3Q9NUN7 267 aa11.11□□□□□ -0.63
CSNK1D-206ENST00000577578 KLHL28Q9NXS3 571 aa11.11□□□□□ -0.63
CSNK1D-206ENST00000577578 ZNF226Q9NYT6 803 aa11.11□□□□□ -0.63
CSNK1D-206ENST00000577578 ZIM2Q9NZV7 527 aa11.11□□□□□ -0.63
CSNK1D-206ENST00000577578 KLHL13Q9P2N7 655 aa11.11□□□□□ -0.63
CSNK1D-206ENST00000577578 CLEC4AQ9UMR7 237 aa11.11□□□□□ -0.63
CSNK1D-206ENST00000577578 PLEKHA6Q9Y2H5 1048 aa11.11□□□□□ -0.63
CSNK1D-206ENST00000577578 AGAP5A6NIR3 686 aa11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 BCAS1O75363 584 aaPredicted RBP11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 SLC22A3O75751 556 aa11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 H6PDO95479 791 aa11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 UBTFL6P0CB48 400 aaPredicted RBP11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 ZCCHC18P0CG32 403 aa11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 PPP3CBP16298 524 aa11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 PGCP20142 388 aa11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 RPS4Y1P22090 263 aaKnown RBP11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 DNASE1P24855 282 aa11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 KCNJ5P48544 419 aa11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 MRPL19P49406 292 aaKnown RBP11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 ANXA11P50995 505 aaKnown RBP11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 CCR4P51679 360 aa11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 CHRNEQ04844 493 aa11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 TMEM176BQ3YBM2 270 aaPredicted RBP11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 TIGD2Q4W5G0 525 aa11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 FBXW10Q5XX13 1052 aa11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 EPGNQ6UW88 154 aa11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 STAC2Q6ZMT1 411 aa11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 C22orf34Q6ZV56 151 aa11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 CMIPQ8IY22 773 aa11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 SLC43A2Q8N370 569 aa11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 RFWD2Q8NHY2 731 aa11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 TMEM234Q8WY98 164 aa11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 ROBO4Q8WZ75 1007 aa11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 PMM1Q92871 262 aa11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 ZBTB18Q99592 522 aa11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 MED18Q9BUE0 208 aa11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 OR10A4Q9H209 315 aa11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 BCO1Q9HAY6 547 aa11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 SLC6A13Q9NSD5 602 aa11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 ING1Q9UK53 422 aaPredicted RBP11.1□□□□□ -0.63
CSNK1D-206ENST00000577578 DSCAMO60469 2012 aa11.09□□□□□ -0.63
CSNK1D-206ENST00000577578 RFXANKO14593 260 aa11.09□□□□□ -0.63
CSNK1D-206ENST00000577578 ADAM11O75078 769 aa11.09□□□□□ -0.63
CSNK1D-206ENST00000577578 CHRM4P08173 479 aa11.09□□□□□ -0.63
CSNK1D-206ENST00000577578 PSMB1P20618 241 aaKnown RBP11.09□□□□□ -0.63
CSNK1D-206ENST00000577578 LOXP28300 417 aaPredicted RBP11.09□□□□□ -0.63
CSNK1D-206ENST00000577578 KCNJ10P78508 379 aa11.09□□□□□ -0.63
CSNK1D-206ENST00000577578 HPCAP84074 193 aa11.09□□□□□ -0.63
CSNK1D-206ENST00000577578 POU4F3Q15319 338 aa11.09□□□□□ -0.63
CSNK1D-206ENST00000577578 MAPK11Q15759 364 aa11.09□□□□□ -0.63
CSNK1D-206ENST00000577578 NXNQ6DKJ4 435 aa11.09□□□□□ -0.63
CSNK1D-206ENST00000577578 PPP4R4Q6NUP7 873 aa11.09□□□□□ -0.63
CSNK1D-206ENST00000577578 LRRC74BQ6ZQY2 392 aa11.09□□□□□ -0.63
CSNK1D-206ENST00000577578 ZNF621Q6ZSS3 439 aa11.09□□□□□ -0.63
CSNK1D-206ENST00000577578 BEND4Q6ZU67 534 aa11.09□□□□□ -0.63
CSNK1D-206ENST00000577578 PLEKHM3Q6ZWE6 761 aa11.09□□□□□ -0.63
CSNK1D-206ENST00000577578 FCRLAQ7L513 359 aa11.09□□□□□ -0.63
CSNK1D-206ENST00000577578 STK32CQ86UX6 486 aa11.09□□□□□ -0.63
CSNK1D-206ENST00000577578 GABRG1Q8N1C3 465 aa11.09□□□□□ -0.63
CSNK1D-206ENST00000577578 ANKFN1Q8N957 763 aa11.09□□□□□ -0.63
CSNK1D-206ENST00000577578 SLC25A43Q8WUT9 341 aaPredicted RBP11.09□□□□□ -0.63
CSNK1D-206ENST00000577578 REXO5Q96IC2 774 aaKnown RBP11.09□□□□□ -0.63
CSNK1D-206ENST00000577578 ATP6V1G3Q96LB4 118 aa11.09□□□□□ -0.63
CSNK1D-206ENST00000577578 TACO1Q9BSH4 297 aaKnown RBP11.09□□□□□ -0.63
CSNK1D-206ENST00000577578 CCDC106Q9BWC9 280 aa11.09□□□□□ -0.63
CSNK1D-206ENST00000577578 QRSL1Q9H0R6 528 aaKnown RBP11.09□□□□□ -0.63
CSNK1D-206ENST00000577578 FANCFQ9NPI8 374 aa11.09□□□□□ -0.63
CSNK1D-206ENST00000577578 C6orf203Q9P0P8 240 aaPredicted RBP11.09□□□□□ -0.63
CSNK1D-206ENST00000577578 USH1CQ9Y6N9 552 aa11.09□□□□□ -0.63
CSNK1D-206ENST00000577578 DSPPQ9NZW4 1301 aa11.09□□□□□ -0.63
CSNK1D-206ENST00000577578 NIPBLQ6KC79 2804 aaeCLIP11.08□□□□□ -0.63
CSNK1D-206ENST00000577578 CLDN24A6NM45 220 aa11.08□□□□□ -0.64
CSNK1D-206ENST00000577578 FAAHO00519 579 aa11.08□□□□□ -0.64
CSNK1D-206ENST00000577578 SMAD9O15198 467 aaKnown RBP11.08□□□□□ -0.64
CSNK1D-206ENST00000577578 UBDO15205 165 aa11.08□□□□□ -0.64
CSNK1D-206ENST00000577578 CYP7B1O75881 506 aa11.08□□□□□ -0.64
CSNK1D-206ENST00000577578 PRKD3O94806 890 aa11.08□□□□□ -0.64
CSNK1D-206ENST00000577578 TGDSO95455 350 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms