RNA–Protein interactions for RNA: ENST00000576952.1

POLR2A-208, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-208ENST00000576952 CNEP1R1Q8N9A8 125 aa13.71□□□□□ -0.21
POLR2A-208ENST00000576952 ZNF563Q8TA94 476 aa13.71□□□□□ -0.21
POLR2A-208ENST00000576952 ST8SIA1Q92185 356 aa13.71□□□□□ -0.21
POLR2A-208ENST00000576952 RNASE6Q93091 150 aaKnown RBP13.71□□□□□ -0.21
POLR2A-208ENST00000576952 PRRG4Q9BZD6 226 aa13.71□□□□□ -0.21
POLR2A-208ENST00000576952 RNF122Q9H9V4 155 aa13.71□□□□□ -0.21
POLR2A-208ENST00000576952 EXOSC3Q9NQT5 275 aaKnown RBP13.71□□□□□ -0.21
POLR2A-208ENST00000576952 RLIMQ9NVW2 624 aa13.71□□□□□ -0.21
POLR2A-208ENST00000576952 THUMPD1Q9NXG2 353 aaKnown RBP13.71□□□□□ -0.21
POLR2A-208ENST00000576952 DNAJB12Q9NXW2 375 aaKnown RBP13.71□□□□□ -0.21
POLR2A-208ENST00000576952 CALML5Q9NZT1 146 aa13.71□□□□□ -0.21
POLR2A-208ENST00000576952 JKAMPQ9P055 326 aa13.71□□□□□ -0.21
POLR2A-208ENST00000576952 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.71□□□□□ -0.21
POLR2A-208ENST00000576952 LEF1Q9UJU2 399 aaPredicted RBP13.71□□□□□ -0.21
POLR2A-208ENST00000576952 NDUFAF1Q9Y375 327 aa13.71□□□□□ -0.21
POLR2A-208ENST00000576952 TMEM247A6NEH6 219 aa13.7□□□□□ -0.22
POLR2A-208ENST00000576952 AP3D1O14617 1153 aa13.7□□□□□ -0.22
POLR2A-208ENST00000576952 ANGPT2O15123 496 aa13.7□□□□□ -0.22
POLR2A-208ENST00000576952 NID1P14543 1247 aa13.7□□□□□ -0.22
POLR2A-208ENST00000576952 KIR2DL2P43627 348 aaPredicted RBP13.7□□□□□ -0.22
POLR2A-208ENST00000576952 MERTKQ12866 999 aa13.7□□□□□ -0.22
POLR2A-208ENST00000576952 SELENBP1Q13228 472 aa13.7□□□□□ -0.22
POLR2A-208ENST00000576952 ZNF836Q6ZNA1 936 aa13.7□□□□□ -0.22
POLR2A-208ENST00000576952 PLEKHM3Q6ZWE6 761 aa13.7□□□□□ -0.22
POLR2A-208ENST00000576952 CMIPQ8IY22 773 aa13.7□□□□□ -0.22
POLR2A-208ENST00000576952 OR52P1PQ8NH57 321 aa13.7□□□□□ -0.22
POLR2A-208ENST00000576952 TMEM234Q8WY98 164 aa13.7□□□□□ -0.22
POLR2A-208ENST00000576952 PMM1Q92871 262 aa13.7□□□□□ -0.22
POLR2A-208ENST00000576952 OSTF1Q92882 214 aa13.7□□□□□ -0.22
POLR2A-208ENST00000576952 STARD4Q96DR4 205 aa13.7□□□□□ -0.22
POLR2A-208ENST00000576952 SRXN1Q9BYN0 137 aa13.7□□□□□ -0.22
POLR2A-208ENST00000576952 COQ10BQ9H8M1 238 aa13.7□□□□□ -0.22
POLR2A-208ENST00000576952 A4GALTQ9NPC4 353 aa13.7□□□□□ -0.22
POLR2A-208ENST00000576952 ACER3Q9NUN7 267 aa13.7□□□□□ -0.22
POLR2A-208ENST00000576952 PAQR5Q9NXK6 330 aaPredicted RBP13.7□□□□□ -0.22
POLR2A-208ENST00000576952 MCTS1Q9ULC4 181 aaKnown RBP13.7□□□□□ -0.22
POLR2A-208ENST00000576952 CLEC4AQ9UMR7 237 aa13.7□□□□□ -0.22
POLR2A-208ENST00000576952 PRR14LQ5THK1 2151 aa13.69□□□□□ -0.22
POLR2A-208ENST00000576952 NOTCH2Q04721 2471 aa13.69□□□□□ -0.22
POLR2A-208ENST00000576952 A0A0G2JPF8 293 aa13.69□□□□□ -0.22
POLR2A-208ENST00000576952 A0A1W2PNR3 127 aa13.69□□□□□ -0.22
POLR2A-208ENST00000576952 HNRNPCL2B2RXH8 293 aa13.69□□□□□ -0.22
POLR2A-208ENST00000576952 HNRNPCL3B7ZW38 293 aa13.69□□□□□ -0.22
POLR2A-208ENST00000576952 HNRNPCL1O60812 293 aaKnown RBP13.69□□□□□ -0.22
POLR2A-208ENST00000576952 SMNDC1O75940 238 aaKnown RBP eCLIP13.69□□□□□ -0.22
POLR2A-208ENST00000576952 SYNGR4O95473 234 aa13.69□□□□□ -0.22
POLR2A-208ENST00000576952 CRHP06850 196 aa13.69□□□□□ -0.22
POLR2A-208ENST00000576952 HNRNPCL4P0DMR1 293 aa13.69□□□□□ -0.22
POLR2A-208ENST00000576952 ARAFP10398 606 aa13.69□□□□□ -0.22
POLR2A-208ENST00000576952 FCGR2AP12318 317 aa13.69□□□□□ -0.22
POLR2A-208ENST00000576952 PPIBP23284 216 aaKnown RBP13.69□□□□□ -0.22
POLR2A-208ENST00000576952 IDH2P48735 452 aaKnown RBP13.69□□□□□ -0.22
POLR2A-208ENST00000576952 CARD18P57730 90 aa13.69□□□□□ -0.22
POLR2A-208ENST00000576952 GNA13Q14344 377 aa13.69□□□□□ -0.22
POLR2A-208ENST00000576952 RUNDC3AQ59EK9 446 aa13.69□□□□□ -0.22
POLR2A-208ENST00000576952 PDSS1Q5T2R2 415 aa13.69□□□□□ -0.22
POLR2A-208ENST00000576952 GCNT6Q5T4J0 391 aa13.69□□□□□ -0.22
POLR2A-208ENST00000576952 BTLAQ7Z6A9 289 aa13.69□□□□□ -0.22
POLR2A-208ENST00000576952 DHDDSQ86SQ9 333 aa13.69□□□□□ -0.22
POLR2A-208ENST00000576952 DPP10Q8N608 796 aa13.69□□□□□ -0.22
POLR2A-208ENST00000576952 NFKBIDQ8NI38 313 aa13.69□□□□□ -0.22
POLR2A-208ENST00000576952 ROBO4Q8WZ75 1007 aa13.69□□□□□ -0.22
POLR2A-208ENST00000576952 LRRC46Q96FV0 321 aa13.69□□□□□ -0.22
POLR2A-208ENST00000576952 ZNF317Q96PQ6 595 aaPredicted RBP13.69□□□□□ -0.22
POLR2A-208ENST00000576952 CPPED1Q9BRF8 314 aaPredicted RBP13.69□□□□□ -0.22
POLR2A-208ENST00000576952 CTPS2Q9NRF8 586 aa13.69□□□□□ -0.22
POLR2A-208ENST00000576952 PACSIN3Q9UKS6 424 aa13.69□□□□□ -0.22
POLR2A-208ENST00000576952 ZNF443Q9Y2A4 671 aaPredicted RBP13.69□□□□□ -0.22
POLR2A-208ENST00000576952 CHST2Q9Y4C5 530 aa13.69□□□□□ -0.22
POLR2A-208ENST00000576952 GMEB1Q9Y692 573 aa13.69□□□□□ -0.22
POLR2A-208ENST00000576952 ANKHD1Q8IWZ3 2542 aaKnown RBP13.69□□□□□ -0.22
POLR2A-208ENST00000576952 CDHR4A6H8M9 788 aa13.68□□□□□ -0.22
POLR2A-208ENST00000576952 GJE1A6NN92 205 aa13.68□□□□□ -0.22
POLR2A-208ENST00000576952 EVPLLA8MZ36 301 aa13.68□□□□□ -0.22
POLR2A-208ENST00000576952 C5orf58C9J3I9 102 aa13.68□□□□□ -0.22
POLR2A-208ENST00000576952 GKN3PP0CG01 181 aa13.68□□□□□ -0.22
POLR2A-208ENST00000576952 GPX2P18283 190 aa13.68□□□□□ -0.22
POLR2A-208ENST00000576952 SLC7A1P30825 629 aa13.68□□□□□ -0.22
POLR2A-208ENST00000576952 CPA2P48052 419 aa13.68□□□□□ -0.22
POLR2A-208ENST00000576952 EEF1A1P68104 462 aaKnown RBP13.68□□□□□ -0.22
POLR2A-208ENST00000576952 TLE4Q04727 773 aa13.68□□□□□ -0.22
POLR2A-208ENST00000576952 MYBPHQ13203 477 aa13.68□□□□□ -0.22
POLR2A-208ENST00000576952 SELPLGQ14242 412 aa13.68□□□□□ -0.22
POLR2A-208ENST00000576952 GUSBP1Q15486 140 aa13.68□□□□□ -0.22
POLR2A-208ENST00000576952 ZNF239Q16600 458 aaKnown RBP13.68□□□□□ -0.22
POLR2A-208ENST00000576952 LIN52Q52LA3 116 aa13.68□□□□□ -0.22
POLR2A-208ENST00000576952 C3orf33Q6P1S2 294 aa13.68□□□□□ -0.22
POLR2A-208ENST00000576952 CLIP4Q8N3C7 705 aa13.68□□□□□ -0.22
POLR2A-208ENST00000576952 TSPEARQ8WU66 669 aa13.68□□□□□ -0.22
POLR2A-208ENST00000576952 OR5B2Q96R09 309 aa13.68□□□□□ -0.22
POLR2A-208ENST00000576952 CCDC106Q9BWC9 280 aa13.68□□□□□ -0.22
POLR2A-208ENST00000576952 RBM24Q9BX46 236 aaKnown RBP13.68□□□□□ -0.22
POLR2A-208ENST00000576952 OPN3Q9H1Y3 402 aaPredicted RBP13.68□□□□□ -0.22
POLR2A-208ENST00000576952 PIGMQ9H3S5 423 aa13.68□□□□□ -0.22
POLR2A-208ENST00000576952 BCL2L10Q9HD36 194 aa13.68□□□□□ -0.22
POLR2A-208ENST00000576952 SAR1AQ9NR31 198 aa13.68□□□□□ -0.22
POLR2A-208ENST00000576952 GALNT8Q9NY28 637 aa13.68□□□□□ -0.22
POLR2A-208ENST00000576952 KLHL14Q9P2G3 628 aa13.68□□□□□ -0.22
POLR2A-208ENST00000576952 FOXD3Q9UJU5 478 aaPredicted RBP13.68□□□□□ -0.22
POLR2A-208ENST00000576952 CFAP73A6NFT4 308 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms