RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 PINK1Q9BXM7 581 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 REG4Q9BYZ8 158 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 CXorf36Q9H7Y0 433 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 CTSFQ9UBX1 484 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 PPIL1Q9Y3C6 166 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 ARID1AO14497 2285 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 DOCK9Q9BZ29 2069 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 FAM86C2PA6NEL3 165 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 IGSF6O95976 241 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 FGBP02675 491 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 FGF2P09038 288 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 TFPIP10646 304 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 IFNGR1P15260 489 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 LAG3P18627 525 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 LUMP51884 338 aaPredicted RBP8.91□□□□□ -0.98
CCDC40-212ENST00000574799 PGDP52209 483 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 PDZK1IP1Q13113 114 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 ZNF311Q5JNZ3 666 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 PRPF38BQ5VTL8 546 aaKnown RBP8.91□□□□□ -0.98
CCDC40-212ENST00000574799 H3F3CQ6NXT2 135 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 TMEM25Q86YD3 366 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 BEST3Q8N1M1 668 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 SLC44A3Q8N4M1 653 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 OR2T33Q8NG76 320 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 OR13C5Q8NGS8 318 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 OR8S1Q8NH09 359 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 FIBINQ8TAL6 211 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 SNX33Q8WV41 574 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 RAD51AP1Q96B01 352 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 HRASLSQ9HDD0 168 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 CBLCQ9ULV8 474 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 MYO7AQ13402 2215 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 KCNE1BA0A087WTH5 132 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 C1orf196B1AJZ1 125 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 ITGA10O75578 1167 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 SLC2A10O95528 541 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 UGT2B7P16662 529 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 ZNF14P17017 642 aaPredicted RBP8.91□□□□□ -0.98
CCDC40-212ENST00000574799 CD22P20273 847 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 MAT2AP31153 395 aaKnown RBP8.91□□□□□ -0.98
CCDC40-212ENST00000574799 ANXA11P50995 505 aaKnown RBP8.91□□□□□ -0.98
CCDC40-212ENST00000574799 ART1P52961 327 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 PFN3P60673 137 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 AP1S1P61966 158 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 SNRPEP62304 92 aaKnown RBP8.91□□□□□ -0.98
CCDC40-212ENST00000574799 ZNF770Q6IQ21 691 aaPredicted RBP8.91□□□□□ -0.98
CCDC40-212ENST00000574799 SSX6Q7RTT6 188 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 CMTM8Q8IZV2 173 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 OR6T1Q8NGN1 323 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 ABHD4Q8TB40 342 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 RSPRY1Q96DX4 576 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 MRPS24Q96EL2 167 aaKnown RBP8.91□□□□□ -0.98
CCDC40-212ENST00000574799 S100A16Q96FQ6 103 aaKnown RBP8.91□□□□□ -0.98
CCDC40-212ENST00000574799 MRGPRX3Q96LB0 322 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 PFDN5Q99471 154 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 KRCC1Q9NPI7 259 aaPredicted RBP8.91□□□□□ -0.98
CCDC40-212ENST00000574799 MRPL17Q9NRX2 175 aaKnown RBP8.91□□□□□ -0.98
CCDC40-212ENST00000574799 KIAA0100Q14667 2235 aaKnown RBP8.91□□□□□ -0.98
CCDC40-212ENST00000574799 TRBV23-1A0A0A0MS06 115 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 LRIT2A6NDA9 550 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 TMEM229AB2RXF0 380 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 H3BSH0 61 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 FURINP09958 794 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 SAGP10523 405 aaPredicted RBP8.91□□□□□ -0.98
CCDC40-212ENST00000574799 BTCP35070 178 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 CAPZA1P52907 286 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 LASP1Q14847 261 aaKnown RBP8.91□□□□□ -0.98
CCDC40-212ENST00000574799 GRHL2Q6ISB3 625 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 TPGS1Q6ZTW0 290 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 KRT77Q7Z794 578 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 STX12Q86Y82 276 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 LURAP1LQ8IV03 231 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 GPR32P1Q8NGA4 272 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 OR52N1Q8NH53 320 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 C4orf36Q96KX1 117 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 SAMD8Q96LT4 415 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 LYSMD1Q96S90 227 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 ZDHHC6Q9H6R6 413 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 KLK11Q9UBX7 282 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 GPN3Q9UHW5 284 aaPredicted RBP8.91□□□□□ -0.98
CCDC40-212ENST00000574799 FBXL3Q9UKT7 428 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 CAMK2AQ9UQM7 478 aa8.91□□□□□ -0.98
CCDC40-212ENST00000574799 CKAP5Q14008 2032 aa8.9□□□□□ -0.98
CCDC40-212ENST00000574799 SPP1P10451 314 aa8.9□□□□□ -0.98
CCDC40-212ENST00000574799 PTHLHP12272 177 aa8.9□□□□□ -0.98
CCDC40-212ENST00000574799 PRPH2P23942 346 aa8.9□□□□□ -0.98
CCDC40-212ENST00000574799 OMPP47874 163 aa8.9□□□□□ -0.98
CCDC40-212ENST00000574799 PTH2RP49190 550 aa8.9□□□□□ -0.98
CCDC40-212ENST00000574799 RNF144AP50876 292 aaPredicted RBP8.9□□□□□ -0.98
CCDC40-212ENST00000574799 TRAM2Q15035 370 aa8.9□□□□□ -0.98
CCDC40-212ENST00000574799 SLC36A2Q495M3 483 aa8.9□□□□□ -0.98
CCDC40-212ENST00000574799 RNF165Q6ZSG1 346 aa8.9□□□□□ -0.98
CCDC40-212ENST00000574799 NRMQ8IXM6 262 aa8.9□□□□□ -0.98
CCDC40-212ENST00000574799 OR4D9Q8NGE8 314 aa8.9□□□□□ -0.98
CCDC40-212ENST00000574799 OR5M9Q8NGP3 310 aa8.9□□□□□ -0.98
CCDC40-212ENST00000574799 BRIX1Q8TDN6 353 aaKnown RBP8.9□□□□□ -0.98
CCDC40-212ENST00000574799 NEIL2Q969S2 332 aa8.9□□□□□ -0.98
CCDC40-212ENST00000574799 CXorf40BQ96DE9 158 aa8.9□□□□□ -0.98
CCDC40-212ENST00000574799 PDXPQ96GD0 296 aa8.9□□□□□ -0.98
CCDC40-212ENST00000574799 OR1F2PQ96R84 312 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms