RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 FUZQ9BT04 418 aa21.88■■□□□ 1.09
ATPAF1-213ENST00000574428 RNF32Q9H0A6 362 aa21.88■■□□□ 1.09
ATPAF1-213ENST00000574428 VCXQ9H320 206 aa21.88■■□□□ 1.09
ATPAF1-213ENST00000574428 URB1O60287 2271 aaKnown RBP21.88■■□□□ 1.09
ATPAF1-213ENST00000574428 LAMA5O15230 3695 aa21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 ANKUB1A6NFN9 424 aa21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 FAAHO00519 579 aa21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 SNX4O95219 450 aa21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 ARHGDIAP52565 204 aa21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 TMPRSS3P57727 454 aa21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 QPRTQ15274 297 aa21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 ALG10BQ5I7T1 473 aa21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 DCST1Q5T197 706 aa21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 ANKRD34AQ69YU3 496 aa21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 ARSKQ6UWY0 536 aa21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 WDR88Q6ZMY6 472 aa21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 HIPK1Q86Z02 1210 aa21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 MDS2Q8NDY4 140 aa21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 OR2M3Q8NG83 312 aa21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 HAS2Q92819 552 aa21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 PRSS27Q9BQR3 290 aa21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 KLHL1Q9NR64 748 aa21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 TMCC3Q9ULS5 477 aa21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 EI24O14681 340 aa21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 THRBP10828 461 aa21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 MSX1P28360 303 aa21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 SUMO3P55854 103 aaPredicted RBP21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 ULK3Q6PHR2 472 aa21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 PLCZ1Q86YW0 608 aa21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 FADS6Q8N9I5 356 aa21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 OR4K17Q8NGC6 315 aa21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 TMEM255BQ8WV15 326 aa21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 ZCCHC14Q8WYQ9 949 aaKnown RBP21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 C3orf49Q96BT1 292 aa21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.87■■□□□ 1.09
ATPAF1-213ENST00000574428 CDK2AP1O14519 115 aa21.86■■□□□ 1.09
ATPAF1-213ENST00000574428 SNPHO15079 494 aa21.86■■□□□ 1.09
ATPAF1-213ENST00000574428 CHP2O43745 196 aa21.86■■□□□ 1.09
ATPAF1-213ENST00000574428 TRIM3O75382 744 aaPredicted RBP21.86■■□□□ 1.09
ATPAF1-213ENST00000574428 CCNB2O95067 398 aa21.86■■□□□ 1.09
ATPAF1-213ENST00000574428 WISP1O95388 367 aa21.86■■□□□ 1.09
ATPAF1-213ENST00000574428 LSM11P83369 360 aaKnown RBP eCLIP21.86■■□□□ 1.09
ATPAF1-213ENST00000574428 MICAQ29983 383 aa21.86■■□□□ 1.09
ATPAF1-213ENST00000574428 OR9Q2Q8NGE9 314 aa21.86■■□□□ 1.09
ATPAF1-213ENST00000574428 GIPC3Q8TF64 312 aa21.86■■□□□ 1.09
ATPAF1-213ENST00000574428 NRBF2Q96F24 287 aa21.86■■□□□ 1.09
ATPAF1-213ENST00000574428 TMEM41AQ96HV5 264 aa21.86■■□□□ 1.09
ATPAF1-213ENST00000574428 ANKRD19PQ9H560 264 aa21.86■■□□□ 1.09
ATPAF1-213ENST00000574428 SMURF2Q9HAU4 748 aa21.86■■□□□ 1.09
ATPAF1-213ENST00000574428 TAS2R10Q9NYW0 307 aa21.86■■□□□ 1.09
ATPAF1-213ENST00000574428 SELENONQ9NZV5 590 aa21.86■■□□□ 1.09
ATPAF1-213ENST00000574428 CSAG2Q9Y5P2 127 aa21.86■■□□□ 1.09
ATPAF1-213ENST00000574428 SH3PXD2BA1X283 911 aa21.85■■□□□ 1.09
ATPAF1-213ENST00000574428 RASAL1O95294 804 aa21.85■■□□□ 1.09
ATPAF1-213ENST00000574428 CNR1P21554 472 aa21.85■■□□□ 1.09
ATPAF1-213ENST00000574428 SLC1A3P43003 542 aa21.85■■□□□ 1.09
ATPAF1-213ENST00000574428 UCNP55089 124 aa21.85■■□□□ 1.09
ATPAF1-213ENST00000574428 IGFL2Q6UWQ7 119 aa21.85■■□□□ 1.09
ATPAF1-213ENST00000574428 OR10G2Q8NGC3 310 aa21.85■■□□□ 1.09
ATPAF1-213ENST00000574428 OR1J4Q8NGS1 313 aa21.85■■□□□ 1.09
ATPAF1-213ENST00000574428 SLC38A4Q969I6 547 aa21.85■■□□□ 1.09
ATPAF1-213ENST00000574428 GNRHR2Q96P88 292 aa21.85■■□□□ 1.09
ATPAF1-213ENST00000574428 HHATLQ9HCP6 504 aa21.85■■□□□ 1.09
ATPAF1-213ENST00000574428 VDAC3Q9Y277 283 aa21.85■■□□□ 1.09
ATPAF1-213ENST00000574428 PCNX3Q9H6A9 2034 aa21.84■■□□□ 1.09
ATPAF1-213ENST00000574428 A0A087WUU8 490 aa21.84■■□□□ 1.09
ATPAF1-213ENST00000574428 PINLYPA6NC86 204 aa21.84■■□□□ 1.09
ATPAF1-213ENST00000574428 GP1BBP13224 206 aa21.84■■□□□ 1.09
ATPAF1-213ENST00000574428 GK3PQ14409 553 aa21.84■■□□□ 1.09
ATPAF1-213ENST00000574428 TIGD3Q6B0B8 471 aa21.84■■□□□ 1.09
ATPAF1-213ENST00000574428 BORAQ6PGQ7 559 aa21.84■■□□□ 1.09
ATPAF1-213ENST00000574428 DNAJA4Q8WW22 397 aaPredicted RBP21.84■■□□□ 1.09
ATPAF1-213ENST00000574428 ZNF597Q96LX8 424 aa21.84■■□□□ 1.09
ATPAF1-213ENST00000574428 SMAD5Q99717 465 aaKnown RBP21.84■■□□□ 1.09
ATPAF1-213ENST00000574428 TUBA8Q9NY65 449 aaPredicted RBP21.84■■□□□ 1.09
ATPAF1-213ENST00000574428 A0A087WV48 116 aa21.84■■□□□ 1.09
ATPAF1-213ENST00000574428 SP1P08047 785 aa21.84■■□□□ 1.09
ATPAF1-213ENST00000574428 TCEA1P23193 301 aaKnown RBP21.84■■□□□ 1.09
ATPAF1-213ENST00000574428 TACR3P29371 465 aa21.84■■□□□ 1.09
ATPAF1-213ENST00000574428 ZNF41P51814 821 aaPredicted RBP21.84■■□□□ 1.09
ATPAF1-213ENST00000574428 PPP4R4Q6NUP7 873 aa21.84■■□□□ 1.09
ATPAF1-213ENST00000574428 ZNF730Q6ZMV8 503 aa21.84■■□□□ 1.09
ATPAF1-213ENST00000574428 OR4K5Q8NGD3 323 aa21.84■■□□□ 1.09
ATPAF1-213ENST00000574428 MAGEE2Q8TD90 523 aaPredicted RBP21.84■■□□□ 1.09
ATPAF1-213ENST00000574428 ACOT11Q8WXI4 607 aaPredicted RBP21.84■■□□□ 1.09
ATPAF1-213ENST00000574428 C1GALT1C1Q96EU7 318 aa21.84■■□□□ 1.09
ATPAF1-213ENST00000574428 C5orf34Q96MH7 638 aa21.84■■□□□ 1.09
ATPAF1-213ENST00000574428 NPAS1Q99742 590 aa21.84■■□□□ 1.09
ATPAF1-213ENST00000574428 GABARAPL1Q9H0R8 117 aa21.84■■□□□ 1.09
ATPAF1-213ENST00000574428 MED17Q9NVC6 651 aa21.84■■□□□ 1.09
ATPAF1-213ENST00000574428 LRRC3CA6NJW4 275 aa21.83■■□□□ 1.09
ATPAF1-213ENST00000574428 H0YJX3 145 aa21.83■■□□□ 1.09
ATPAF1-213ENST00000574428 NME2P1O60361 137 aa21.83■■□□□ 1.09
ATPAF1-213ENST00000574428 OR10H3O60404 316 aa21.83■■□□□ 1.09
ATPAF1-213ENST00000574428 CD46P15529 392 aa21.83■■□□□ 1.09
ATPAF1-213ENST00000574428 NME2P22392 152 aa21.83■■□□□ 1.09
ATPAF1-213ENST00000574428 HSPA13P48723 471 aa21.83■■□□□ 1.09
ATPAF1-213ENST00000574428 TNFSF10P50591 281 aa21.83■■□□□ 1.09
ATPAF1-213ENST00000574428 DAG1Q14118 895 aa21.83■■□□□ 1.09
ATPAF1-213ENST00000574428 SLC25A25Q6KCM7 469 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms