RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 AGTP01019 485 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 KRT6AP02538 564 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 KRT6BP04259 564 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 PABPC4LP0CB38 370 aaKnown RBP4.8□□□□□ -1.64
SF3B3-214ENST00000572365 KRT3P12035 628 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 FCGR1AP12314 374 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 UGT2B7P16662 529 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 GNAZP19086 355 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 CTNNA1P35221 906 aaKnown RBP4.8□□□□□ -1.64
SF3B3-214ENST00000572365 GABRA4P48169 554 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 TMED10P49755 219 aaKnown RBP4.8□□□□□ -1.64
SF3B3-214ENST00000572365 RAB28P51157 221 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 ZNF41P51814 821 aaPredicted RBP4.8□□□□□ -1.64
SF3B3-214ENST00000572365 EFNA3P52797 238 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 CSE1LP55060 971 aaKnown RBP4.8□□□□□ -1.64
SF3B3-214ENST00000572365 CDH13P55290 713 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 SNRPEP62304 92 aaKnown RBP4.8□□□□□ -1.64
SF3B3-214ENST00000572365 OGDHQ02218 1023 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 DLG1Q12959 904 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 BNIP1Q12981 228 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 MESDQ14696 234 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 PTPRCAPQ14761 206 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 OR1C1Q15619 314 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 LIN52Q52LA3 116 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 MARC1Q5VT66 337 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 SHEQ5VZ18 495 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 CST9LP1Q5W188 147 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 OR52E8Q6IFG1 317 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 CNSTQ6PJW8 725 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 FRA10AC1Q70Z53 315 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 STRADAQ7RTN6 431 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 NT5DC3Q86UY8 548 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 NDUFAF2Q8N183 169 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 SPATA4Q8NEY3 305 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 LRRC8CQ8TDW0 803 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 ACMSDQ8TDX5 336 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 STMN2Q93045 179 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 VPS33AQ96AX1 596 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 PGM2Q96G03 612 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 TTC25Q96NG3 672 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 ZNF385AQ96PM9 386 aaKnown RBP4.8□□□□□ -1.64
SF3B3-214ENST00000572365 GSDMAQ96QA5 445 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 PEBP4Q96S96 227 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 NPAS2Q99743 824 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 C17orf62Q9BQA9 187 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 MGME1Q9BQP7 344 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 NUP85Q9BW27 656 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 OSBPL10Q9BXB5 764 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 ROPN1BQ9BZX4 212 aaPredicted RBP4.8□□□□□ -1.64
SF3B3-214ENST00000572365 ATG10Q9H0Y0 220 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 Q9H521 79 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 KIR3DX1Q9H7L2 352 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 C10orf88Q9H8K7 445 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 ROPN1Q9HAT0 212 aaPredicted RBP4.8□□□□□ -1.64
SF3B3-214ENST00000572365 SIX2Q9NPC8 291 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 PNPLA3Q9NST1 481 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 FAIMQ9NVQ4 179 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 GIN1Q9NXP7 522 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 C6orf203Q9P0P8 240 aaPredicted RBP4.8□□□□□ -1.64
SF3B3-214ENST00000572365 GNPTGQ9UJJ9 305 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 GUCA1BQ9UMX6 200 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 AP1M2Q9Y6Q5 423 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 DOCK7Q96N67 2140 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 CADP27708 2225 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 OR2M5A3KFT3 312 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 ZNF587BE7ETH6 402 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 TO15178 435 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 SSX4O60224 188 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 SMPD2O60906 423 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 BMP10O95393 424 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 STATHP02808 62 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 SERPINA7P05543 415 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 ACAA1P09110 424 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-214ENST00000572365 QDPRP09417 244 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 MYOD1P15172 320 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 VCLP18206 1134 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 PDHA2P29803 388 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 MC5RP33032 325 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 CDH5P33151 784 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-214ENST00000572365 CD86P42081 329 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 KRT6CP48668 564 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 EMP2P54851 167 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 RFTN1Q14699 578 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-214ENST00000572365 BCL2A1Q16548 175 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 HSP90AA4PQ58FG1 418 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 ACER2Q5QJU3 275 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 ZNF658Q5TYW1 1059 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-214ENST00000572365 NEPROQ6NW34 567 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 SPESP1Q6UW49 350 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 KDELC1Q6UW63 502 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 RAD9BQ6WBX8 426 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 ZNF704Q6ZNC4 412 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-214ENST00000572365 VSIG1Q86XK7 387 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 CRLF3Q8IUI8 442 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 FAM71AQ8IYT1 594 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 DNAJC22Q8N4W6 341 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 C1orf52Q8N6N3 182 aaKnown RBP4.79□□□□□ -1.64
SF3B3-214ENST00000572365 PAPD5Q8NDF8 572 aaKnown RBP4.79□□□□□ -1.64
SF3B3-214ENST00000572365 MDS2Q8NDY4 140 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 OR52E1Q8NGJ3 308 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms