RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 ACER3Q9NUN7 267 aa8.56□□□□□ -1.04
NPLOC4-208ENST00000572351 STOML1Q9UBI4 398 aa8.56□□□□□ -1.04
NPLOC4-208ENST00000572351 MRPS18CQ9Y3D5 142 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-208ENST00000572351 LIPGQ9Y5X9 500 aa8.56□□□□□ -1.04
NPLOC4-208ENST00000572351 SPIN1Q9Y657 262 aaPredicted RBP8.56□□□□□ -1.04
NPLOC4-208ENST00000572351 CFAP47Q6ZTR5 3102 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 DHRS12A0PJE2 317 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 OR2M5A3KFT3 312 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 C7orf72A4D263 438 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 ELOA3DA6NLF2 546 aaPredicted RBP8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 GJE1A6NN92 205 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 LINC01387J3KSC0 135 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 hCG_2039718K7EN88 272 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 RRP9O43818 475 aaKnown RBP8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 ZIC3O60481 467 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 ADAM11O75078 769 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 PRB1P04280 392 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 FABP3P05413 133 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 GPIP06744 558 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 EDN3P14138 238 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 NQO1P15559 274 aaKnown RBP8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 ITGA2P17301 1181 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 CXCR1P25024 350 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 HTR2AP28223 471 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 ADH6P28332 368 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 TACR3P29371 465 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 YAP1P46937 504 aaKnown RBP8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 POLR2HP52434 150 aaKnown RBP8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 ZNF136P52737 540 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 HSF1Q00613 529 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 RBPJQ06330 500 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 FOXD4Q12950 439 aaPredicted RBP8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 OR1Q1Q15612 314 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 ELOA3BQ3SY89 546 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 ALG10BQ5I7T1 473 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 ENTPD8Q5MY95 495 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 ULK3Q6PHR2 472 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 GFRALQ6UXV0 394 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 GTPBP8Q8N3Z3 284 aaPredicted RBP8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 ATP6V1C2Q8NEY4 427 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 ELOA3Q8NG57 546 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 OR4D11Q8NGI4 311 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 NEIL3Q8TAT5 605 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 DNAJA4Q8WW22 397 aaPredicted RBP8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 ABTB1Q969K4 478 aaPredicted RBP8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 UTP4Q969X6 686 aaKnown RBP8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 SARAFQ96BY9 339 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 SLX1AQ9BQ83 275 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 KLHDC3Q9BQ90 382 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 WFDC6Q9BQY6 131 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 RSPO3Q9BXY4 272 aaPredicted RBP8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 TMEM185BQ9H7F4 350 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 ACAD8Q9UKU7 415 aa8.55□□□□□ -1.04
NPLOC4-208ENST00000572351 TMED7-TICAM2A0A0A6YYA0 188 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 A0A1B0GTH9 108 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 A0A1B0GWA3 101 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 TCRBV5S2A0A599 114 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 TRAPPC13A5PLN9 417 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 TMEM229AB2RXF0 380 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 B8ZZF3 427 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 NPIPA2E9PIF3 369 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 NPIPA3F8WFD2 350 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 AQP7O14520 342 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 SEC14L5O43304 696 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 SUSD5O60279 629 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 OR5F1O95221 314 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 ACTL6AO96019 429 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 IGHG3P01860 377 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 TFPIP10646 304 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 PNMTP11086 282 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 UMPSP11172 480 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 PEPDP12955 493 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 ABOP16442 354 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 BMP7P18075 431 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 CHMP24386 653 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 ELK4P28324 431 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 SLC7A1P30825 629 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 PTGS2P35354 604 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 APOBEC1P41238 236 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 SELENBP1Q13228 472 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 NPTX1Q15818 432 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 SOWAHCQ53LP3 525 aaPredicted RBP8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 ZNF324BQ6AW86 544 aaPredicted RBP8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 C3orf33Q6P1S2 294 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 ZNF613Q6PF04 617 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 UBQLNLQ8IYU4 475 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 LILRA2Q8N149 483 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 MEIOBQ8N635 442 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 LSMEM1Q8N8F7 131 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 POC1BQ8TC44 478 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 ADAMTS16Q8TE57 1224 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 RELTQ969Z4 430 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 SLC41A3Q96GZ6 507 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 PRRC1Q96M27 445 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 FNDC11Q9BVV2 318 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 AMBRA1Q9C0C7 1298 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 POLR2J2Q9GZM3 115 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 POLR2J3Q9H1A7 115 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 MAGIXQ9H6Y5 334 aa8.54□□□□□ -1.04
NPLOC4-208ENST00000572351 YY1AP1Q9H869 796 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms