RNA–Protein interactions for RNA: ENST00000571805.5

VPS53-211, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-211ENST00000571805 GPALPP1Q8IXQ4 340 aa21.04■□□□□ 0.96
VPS53-211ENST00000571805 C17orf47Q8NEP4 570 aa21.04■□□□□ 0.96
VPS53-211ENST00000571805 ABHD4Q8TB40 342 aa21.04■□□□□ 0.96
VPS53-211ENST00000571805 KCTD12Q96CX2 325 aaKnown RBP21.04■□□□□ 0.96
VPS53-211ENST00000571805 TNFRSF13CQ96RJ3 184 aa21.04■□□□□ 0.96
VPS53-211ENST00000571805 ZNF426Q9BUY5 554 aa21.04■□□□□ 0.96
VPS53-211ENST00000571805 KLHL21Q9UJP4 597 aa21.04■□□□□ 0.96
VPS53-211ENST00000571805 RIIAD1A6NNX1 92 aa21.03■□□□□ 0.96
VPS53-211ENST00000571805 CHP2O43745 196 aa21.03■□□□□ 0.96
VPS53-211ENST00000571805 SCO2O43819 266 aa21.03■□□□□ 0.96
VPS53-211ENST00000571805 SC5DO75845 299 aa21.03■□□□□ 0.96
VPS53-211ENST00000571805 PPP1R3DO95685 299 aa21.03■□□□□ 0.96
VPS53-211ENST00000571805 VASH1Q7L8A9 365 aaPredicted RBP21.03■□□□□ 0.96
VPS53-211ENST00000571805 LRRC28Q86X40 367 aaPredicted RBP21.03■□□□□ 0.96
VPS53-211ENST00000571805 SFTPA2Q8IWL1 248 aa21.03■□□□□ 0.96
VPS53-211ENST00000571805 CYB561A3Q8NBI2 242 aa21.03■□□□□ 0.96
VPS53-211ENST00000571805 OR4C6Q8NH72 309 aa21.03■□□□□ 0.96
VPS53-211ENST00000571805 C4orf36Q96KX1 117 aa21.03■□□□□ 0.96
VPS53-211ENST00000571805 ERVMER34-1Q9H9K5 563 aa21.03■□□□□ 0.96
VPS53-211ENST00000571805 ENAMQ9NRM1 1142 aa21.03■□□□□ 0.96
VPS53-211ENST00000571805 HAO2Q9NYQ3 351 aa21.03■□□□□ 0.96
VPS53-211ENST00000571805 ENTPD2Q9Y5L3 495 aa21.03■□□□□ 0.96
VPS53-211ENST00000571805 A0A0G2JK05 382 aa21.03■□□□□ 0.96
VPS53-211ENST00000571805 A0A1B0GWA3 101 aa21.03■□□□□ 0.96
VPS53-211ENST00000571805 NGFRP08138 427 aa21.03■□□□□ 0.96
VPS53-211ENST00000571805 OR12D2P58182 307 aa21.03■□□□□ 0.96
VPS53-211ENST00000571805 SLC3A1Q07837 685 aa21.03■□□□□ 0.96
VPS53-211ENST00000571805 TRAM1Q15629 374 aa21.03■□□□□ 0.96
VPS53-211ENST00000571805 ZC3H14Q6PJT7 736 aaKnown RBP21.03■□□□□ 0.96
VPS53-211ENST00000571805 IL20RBQ6UXL0 311 aa21.03■□□□□ 0.96
VPS53-211ENST00000571805 PXKQ7Z7A4 578 aa21.03■□□□□ 0.96
VPS53-211ENST00000571805 ZNF655Q8N720 491 aaPredicted RBP21.03■□□□□ 0.96
VPS53-211ENST00000571805 OR52R1Q8NGF1 315 aa21.03■□□□□ 0.96
VPS53-211ENST00000571805 SMPDL3BQ92485 455 aa21.03■□□□□ 0.96
VPS53-211ENST00000571805 PGLYRP3Q96LB9 341 aa21.03■□□□□ 0.96
VPS53-211ENST00000571805 PTCHD1Q96NR3 888 aa21.03■□□□□ 0.96
VPS53-211ENST00000571805 WACQ9BTA9 647 aa21.03■□□□□ 0.96
VPS53-211ENST00000571805 STARD5Q9NSY2 213 aa21.03■□□□□ 0.96
VPS53-211ENST00000571805 CPNE7Q9UBL6 633 aa21.03■□□□□ 0.96
VPS53-211ENST00000571805 J3QLW9 94 aa21.02■□□□□ 0.96
VPS53-211ENST00000571805 TRIM3O75382 744 aaPredicted RBP21.02■□□□□ 0.96
VPS53-211ENST00000571805 SLC43A1O75387 559 aa21.02■□□□□ 0.96
VPS53-211ENST00000571805 EIF4EP06730 217 aaKnown RBP21.02■□□□□ 0.96
VPS53-211ENST00000571805 PEPDP12955 493 aa21.02■□□□□ 0.96
VPS53-211ENST00000571805 ZNF19P17023 458 aa21.02■□□□□ 0.96
VPS53-211ENST00000571805 CTHP32929 405 aa21.02■□□□□ 0.96
VPS53-211ENST00000571805 ACAA2P42765 397 aaKnown RBP21.02■□□□□ 0.96
VPS53-211ENST00000571805 RFX3P48380 749 aa21.02■□□□□ 0.96
VPS53-211ENST00000571805 EMDP50402 254 aa21.02■□□□□ 0.96
VPS53-211ENST00000571805 OR10A3P58181 314 aa21.02■□□□□ 0.96
VPS53-211ENST00000571805 C6orf183Q5T699 404 aa21.02■□□□□ 0.96
VPS53-211ENST00000571805 CEACAM19Q7Z692 300 aa21.02■□□□□ 0.96
VPS53-211ENST00000571805 CSNK1A1LQ8N752 337 aa21.02■□□□□ 0.96
VPS53-211ENST00000571805 YIPF7Q8N8F6 280 aa21.02■□□□□ 0.96
VPS53-211ENST00000571805 OR4M1Q8NGD0 313 aa21.02■□□□□ 0.96
VPS53-211ENST00000571805 HRASLS2Q9NWW9 162 aa21.02■□□□□ 0.96
VPS53-211ENST00000571805 RASD1Q9Y272 281 aa21.02■□□□□ 0.96
VPS53-211ENST00000571805 TTC36A6NLP5 189 aa21.02■□□□□ 0.96
VPS53-211ENST00000571805 HCRTR1O43613 425 aa21.02■□□□□ 0.96
VPS53-211ENST00000571805 LANCL1O43813 399 aa21.02■□□□□ 0.96
VPS53-211ENST00000571805 TFPIP10646 304 aa21.02■□□□□ 0.96
VPS53-211ENST00000571805 HK1P19367 917 aa21.02■□□□□ 0.96
VPS53-211ENST00000571805 INPP1P49441 399 aa21.02■□□□□ 0.96
VPS53-211ENST00000571805 AGFG1P52594 562 aaKnown RBP21.02■□□□□ 0.96
VPS53-211ENST00000571805 ZNF57Q68EA5 555 aaPredicted RBP21.02■□□□□ 0.96
VPS53-211ENST00000571805 SFXN4Q6P4A7 337 aa21.02■□□□□ 0.96
VPS53-211ENST00000571805 RPTNQ6XPR3 784 aa21.02■□□□□ 0.96
VPS53-211ENST00000571805 OAFQ86UD1 273 aa21.02■□□□□ 0.96
VPS53-211ENST00000571805 TPRA1Q86W33 373 aa21.02■□□□□ 0.96
VPS53-211ENST00000571805 GRAMD2AQ8IUY3 354 aa21.02■□□□□ 0.96
VPS53-211ENST00000571805 LIX1LQ8IVB5 337 aa21.02■□□□□ 0.96
VPS53-211ENST00000571805 CAPN10Q9HC96 672 aa21.02■□□□□ 0.96
VPS53-211ENST00000571805 MCCC2Q9HCC0 563 aa21.02■□□□□ 0.96
VPS53-211ENST00000571805 BAIAP2Q9UQB8 552 aa21.02■□□□□ 0.96
VPS53-211ENST00000571805 A0A0J9YY10 115 aa21.01■□□□□ 0.95
VPS53-211ENST00000571805 SYNDIG1LA6NDD5 238 aa21.01■□□□□ 0.95
VPS53-211ENST00000571805 GYPBP06028 91 aa21.01■□□□□ 0.95
VPS53-211ENST00000571805 ZNF3P17036 446 aa21.01■□□□□ 0.95
VPS53-211ENST00000571805 S1PR1P21453 382 aa21.01■□□□□ 0.95
VPS53-211ENST00000571805 VSX2P58304 361 aaPredicted RBP21.01■□□□□ 0.95
VPS53-211ENST00000571805 TAS2R43P59537 309 aa21.01■□□□□ 0.95
VPS53-211ENST00000571805 PSG6Q00889 435 aa21.01■□□□□ 0.95
VPS53-211ENST00000571805 HYAL1Q12794 435 aa21.01■□□□□ 0.95
VPS53-211ENST00000571805 YIF1BQ5BJH7 314 aa21.01■□□□□ 0.95
VPS53-211ENST00000571805 TIGD3Q6B0B8 471 aa21.01■□□□□ 0.95
VPS53-211ENST00000571805 DMKNQ6E0U4 476 aaPredicted RBP21.01■□□□□ 0.95
VPS53-211ENST00000571805 FAAH2Q6GMR7 532 aa21.01■□□□□ 0.95
VPS53-211ENST00000571805 KIAA1324Q6UXG2 1013 aaKnown RBP21.01■□□□□ 0.95
VPS53-211ENST00000571805 RTL4Q6ZR62 310 aa21.01■□□□□ 0.95
VPS53-211ENST00000571805 SLC2A12Q8TD20 617 aa21.01■□□□□ 0.95
VPS53-211ENST00000571805 PEX11GQ96HA9 241 aa21.01■□□□□ 0.95
VPS53-211ENST00000571805 EVA1AQ9H8M9 152 aa21.01■□□□□ 0.95
VPS53-211ENST00000571805 TRPV5Q9NQA5 729 aa21.01■□□□□ 0.95
VPS53-211ENST00000571805 NOX1Q9Y5S8 564 aa21.01■□□□□ 0.95
VPS53-211ENST00000571805 COL4A2P08572 1712 aa21.01■□□□□ 0.95
VPS53-211ENST00000571805 OR6C70A6NIJ9 312 aa21.01■□□□□ 0.95
VPS53-211ENST00000571805 SLC35E2P0CK97 266 aa21.01■□□□□ 0.95
VPS53-211ENST00000571805 PPP1CAP62136 330 aa21.01■□□□□ 0.95
VPS53-211ENST00000571805 YPEL5P62699 121 aa21.01■□□□□ 0.95
VPS53-211ENST00000571805 UBE2IP63279 158 aaKnown RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms