RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 OR10J5Q8NHC4 309 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 RNASE11Q8TAA1 199 aaKnown RBP3.29□□□□□ -1.88
SMG6-208ENST00000570874 MARCH1Q8TCQ1 289 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 CHPT1Q8WUD6 406 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 FBLIM1Q8WUP2 373 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 PIH1D2Q8WWB5 315 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 RASSF5Q8WWW0 418 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 MAFIPQ8WZ33 124 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 SMPDL3BQ92485 455 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 STMN2Q93045 179 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 FAM46BQ96A09 425 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 ISL2Q96A47 359 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 NXNL1Q96CM4 212 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 MTBPQ96DY7 904 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 PTCD3Q96EY7 689 aaKnown RBP3.29□□□□□ -1.88
SMG6-208ENST00000570874 WDR89Q96FK6 387 aaPredicted RBP3.29□□□□□ -1.88
SMG6-208ENST00000570874 SMIM10Q96HG1 83 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 PPP1R16AQ96I34 528 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 NSL1Q96IY1 281 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 ZNF599Q96NL3 588 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 WFIKKN1Q96NZ8 548 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 GPR78Q96P69 363 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 OR5B2Q96R09 309 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 SORT1Q99523 831 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 TEAD3Q99594 435 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 GPR22Q99680 433 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 SLC30A3Q99726 388 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 NPAS1Q99742 590 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 FOXB1Q99853 325 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 ZNF251Q9BRH9 671 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 SLC30A2Q9BRI3 323 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 H2AFJQ9BTM1 129 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 RPP25Q9BUL9 199 aaKnown RBP3.29□□□□□ -1.88
SMG6-208ENST00000570874 C20orf24Q9BUV8 137 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 GTPBP2Q9BX10 602 aaKnown RBP3.29□□□□□ -1.88
SMG6-208ENST00000570874 TSSK1BQ9BXA7 367 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 KRTAP9-8Q9BYQ0 159 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 PLA2G2FQ9BZM2 168 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 HOXD1Q9GZZ0 328 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 OR2AG1Q9H205 316 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 HIPK2Q9H2X6 1198 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 SLCO5A1Q9H2Y9 848 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 FN3KQ9H479 309 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 RHOJQ9H4E5 214 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 EBF3Q9H4W6 596 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 PIDD1Q9HB75 910 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 LPAR2Q9HBW0 351 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 GPAMQ9HCL2 828 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 CHMP1AQ9HD42 196 aaPredicted RBP3.29□□□□□ -1.88
SMG6-208ENST00000570874 RANGRFQ9HD47 186 aaPredicted RBP3.29□□□□□ -1.88
SMG6-208ENST00000570874 TIMMDC1Q9NPL8 285 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 CTPS2Q9NRF8 586 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 RLIMQ9NVW2 624 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 GID8Q9NWU2 228 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 THUMPD1Q9NXG2 353 aaKnown RBP3.29□□□□□ -1.88
SMG6-208ENST00000570874 TAS2R9Q9NYW1 312 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 TAS2R1Q9NYW7 299 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 STMN3Q9NZ72 180 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 ABI3Q9P2A4 366 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 XPR1Q9UBH6 696 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 MARCOQ9UEW3 520 aaPredicted RBP3.29□□□□□ -1.88
SMG6-208ENST00000570874 LSM7Q9UK45 103 aaKnown RBP3.29□□□□□ -1.88
SMG6-208ENST00000570874 A4GNTQ9UNA3 340 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 PPP1R3CQ9UQK1 317 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 SLC22A13Q9Y226 551 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 WIF1Q9Y5W5 379 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 RALGAPA1Q6GYQ0 2036 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 ABCA7Q8IZY2 2146 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 CEP290O15078 2479 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 LOC105369274A0A096LPK9 316 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.28□□□□□ -1.88
SMG6-208ENST00000570874 LOC102723532A0A0G2JNH3 316 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 SMIM31A0A1B0GVY4 71 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 A0A1W2PPQ1 181 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 OR5K3A6NET4 321 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 A8MU76 341 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 USP17L23D6RBM5 183 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 ATP6V1G2-DDX39BF2Z307 99 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 PPIAL4DF5H284 164 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 F8W036 122 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 MKRN2OSH3BPM6 223 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 TEX46H3BTG2 121 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 M0QZK8 103 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 ACOT7O00154 380 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 GYG2O15488 501 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 EMC8O43402 210 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 RGS10O43665 173 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 OR10H2O60403 315 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 OR10H3O60404 316 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 OR1I1O60431 355 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 OR2F2O95006 317 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 NXPH2O95156 264 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 CLDN7O95471 211 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 PRAMEF1O95521 474 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 AMY1AP04745 511 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 CTSLP07711 333 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 CHRM4P08173 479 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 CD63P08962 238 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 CISD3P0C7P0 127 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 LINC00614P0C842 121 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 177.3 ms