RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 RPS27P42677 84 aaKnown RBP14.21□□□□□ -0.13
USP43-202ENST00000570475 TMEM44Q2T9K0 475 aa14.21□□□□□ -0.13
USP43-202ENST00000570475 ALG10BQ5I7T1 473 aa14.21□□□□□ -0.13
USP43-202ENST00000570475 DCST2Q5T1A1 773 aa14.21□□□□□ -0.13
USP43-202ENST00000570475 TANGO2Q6ICL3 276 aa14.21□□□□□ -0.13
USP43-202ENST00000570475 RASGRP3Q8IV61 690 aa14.21□□□□□ -0.13
USP43-202ENST00000570475 OR5M3Q8NGP4 307 aa14.21□□□□□ -0.13
USP43-202ENST00000570475 CNOT9Q92600 299 aaKnown RBP14.21□□□□□ -0.13
USP43-202ENST00000570475 BCL2L10Q9HD36 194 aa14.21□□□□□ -0.13
USP43-202ENST00000570475 EVA1BQ9NVM1 165 aa14.21□□□□□ -0.13
USP43-202ENST00000570475 ACAD8Q9UKU7 415 aa14.21□□□□□ -0.13
USP43-202ENST00000570475 TSPAN11A1L157 253 aa14.21□□□□□ -0.13
USP43-202ENST00000570475 POM121BA6NF01 834 aa14.21□□□□□ -0.13
USP43-202ENST00000570475 SLC22A31A6NKX4 558 aa14.21□□□□□ -0.13
USP43-202ENST00000570475 KDM4EB2RXH2 506 aaPredicted RBP14.21□□□□□ -0.13
USP43-202ENST00000570475 DPTQ07507 201 aa14.21□□□□□ -0.13
USP43-202ENST00000570475 EIPR1Q53HC9 387 aa14.21□□□□□ -0.13
USP43-202ENST00000570475 ANKRD33Q7Z3H0 272 aa14.21□□□□□ -0.13
USP43-202ENST00000570475 NR2C2APQ86WQ0 139 aa14.21□□□□□ -0.13
USP43-202ENST00000570475 ZNF527Q8NB42 609 aa14.21□□□□□ -0.13
USP43-202ENST00000570475 DNAJA4Q8WW22 397 aaPredicted RBP14.21□□□□□ -0.13
USP43-202ENST00000570475 DERL3Q96Q80 235 aa14.21□□□□□ -0.13
USP43-202ENST00000570475 TBC1D29Q9UFV1 150 aa14.21□□□□□ -0.13
USP43-202ENST00000570475 FGF9P31371 208 aaPredicted RBP14.21□□□□□ -0.14
USP43-202ENST00000570475 GDI2P50395 445 aaKnown RBP14.21□□□□□ -0.14
USP43-202ENST00000570475 DECR1Q16698 335 aa14.21□□□□□ -0.14
USP43-202ENST00000570475 FAM209AQ5JX71 171 aa14.21□□□□□ -0.14
USP43-202ENST00000570475 NIPAL3Q6P499 406 aa14.21□□□□□ -0.14
USP43-202ENST00000570475 SMARCD2Q92925 531 aa14.21□□□□□ -0.14
USP43-202ENST00000570475 LINC00615Q96LM1 132 aaPredicted RBP14.21□□□□□ -0.14
USP43-202ENST00000570475 SDF2Q99470 211 aa14.21□□□□□ -0.14
USP43-202ENST00000570475 IL20Q9NYY1 176 aa14.21□□□□□ -0.14
USP43-202ENST00000570475 FKBP7Q9Y680 259 aa14.21□□□□□ -0.14
USP43-202ENST00000570475 WDR87Q6ZQQ6 2873 aa14.21□□□□□ -0.14
USP43-202ENST00000570475 IDSB3KWA1 339 aa14.2□□□□□ -0.14
USP43-202ENST00000570475 SNRPNP63162 240 aaKnown RBP14.2□□□□□ -0.14
USP43-202ENST00000570475 PON3Q15166 354 aa14.2□□□□□ -0.14
USP43-202ENST00000570475 RTL4Q6ZR62 310 aa14.2□□□□□ -0.14
USP43-202ENST00000570475 RFLNBQ8N5W9 214 aa14.2□□□□□ -0.14
USP43-202ENST00000570475 SPPL3Q8TCT6 385 aa14.2□□□□□ -0.14
USP43-202ENST00000570475 NFKBIL1Q9UBC1 381 aaPredicted RBP14.2□□□□□ -0.14
USP43-202ENST00000570475 ADAM29Q9UKF5 820 aa14.2□□□□□ -0.14
USP43-202ENST00000570475 SGK494L7N484 410 aa14.2□□□□□ -0.14
USP43-202ENST00000570475 APODP05090 189 aa14.2□□□□□ -0.14
USP43-202ENST00000570475 PROS1P07225 676 aa14.2□□□□□ -0.14
USP43-202ENST00000570475 C1orf61Q13536 156 aa14.2□□□□□ -0.14
USP43-202ENST00000570475 PRSS58Q8IYP2 241 aa14.2□□□□□ -0.14
USP43-202ENST00000570475 LGALS14Q8TCE9 139 aa14.2□□□□□ -0.14
USP43-202ENST00000570475 RBM18Q96H35 190 aaKnown RBP14.2□□□□□ -0.14
USP43-202ENST00000570475 C1QTNF6Q9BXI9 259 aa14.2□□□□□ -0.14
USP43-202ENST00000570475 ZNF346Q9UL40 294 aaKnown RBP14.2□□□□□ -0.14
USP43-202ENST00000570475 TP53BP1Q12888 1972 aaPredicted RBP14.2□□□□□ -0.14
USP43-202ENST00000570475 HELZP42694 1942 aaKnown RBP14.2□□□□□ -0.14
USP43-202ENST00000570475 E9PQ18 207 aa14.2□□□□□ -0.14
USP43-202ENST00000570475 RNGTTO60942 597 aaKnown RBP14.2□□□□□ -0.14
USP43-202ENST00000570475 TRAPPC2P0DI81 140 aa14.2□□□□□ -0.14
USP43-202ENST00000570475 TRAPPC2BP0DI82 140 aa14.2□□□□□ -0.14
USP43-202ENST00000570475 AMZ1Q400G9 498 aa14.2□□□□□ -0.14
USP43-202ENST00000570475 HSD17B12Q53GQ0 312 aa14.2□□□□□ -0.14
USP43-202ENST00000570475 WDR45BQ5MNZ6 344 aa14.2□□□□□ -0.14
USP43-202ENST00000570475 ZNF765Q7L2R6 523 aa14.2□□□□□ -0.14
USP43-202ENST00000570475 OR8S1Q8NH09 359 aa14.2□□□□□ -0.14
USP43-202ENST00000570475 OR52N1Q8NH53 320 aa14.2□□□□□ -0.14
USP43-202ENST00000570475 BADQ92934 168 aa14.2□□□□□ -0.14
USP43-202ENST00000570475 MED18Q9BUE0 208 aa14.2□□□□□ -0.14
USP43-202ENST00000570475 MYEF2Q9P2K5 600 aaKnown RBP14.2□□□□□ -0.14
USP43-202ENST00000570475 ARPC1BO15143 372 aaKnown RBP14.19□□□□□ -0.14
USP43-202ENST00000570475 EML2O95834 649 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 MAS1P04201 325 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 LIMK1P53667 647 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 ERVK-25P63136 954 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 CAMK2BQ13554 666 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 ZNHIT3Q15649 155 aaPredicted RBP14.19□□□□□ -0.14
USP43-202ENST00000570475 PYHIN1Q6K0P9 492 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 KIAA1211LQ6NV74 962 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 KANSL1Q7Z3B3 1105 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 POGLUT1Q8NBL1 392 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 ACOT12Q8WYK0 555 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 KIAA1143Q96AT1 154 aaPredicted RBP14.19□□□□□ -0.14
USP43-202ENST00000570475 NMNAT3Q96T66 252 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 RSPH9Q9H1X1 276 aaPredicted RBP14.19□□□□□ -0.14
USP43-202ENST00000570475 SYNPO2LQ9H987 977 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 CLDND1Q9NY35 253 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 ZIC2O95409 532 aaPredicted RBP14.19□□□□□ -0.14
USP43-202ENST00000570475 TIMP1P01033 207 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 ALDOBP05062 364 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 CSN2P05814 226 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 AHCYP23526 432 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 GJA4P35212 333 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 VEGFCP49767 419 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 POU6F2P78424 691 aaPredicted RBP14.19□□□□□ -0.14
USP43-202ENST00000570475 ADAMTSL4Q6UY14 1074 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 WDR88Q6ZMY6 472 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 FCRLAQ7L513 359 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 CREB3L1Q96BA8 519 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 MOAP1Q96BY2 351 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 RNF170Q96K19 258 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 DHRS1Q96LJ7 313 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 SEC22CQ9BRL7 303 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 TMEM168Q9H0V1 697 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms