RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 CXCL13O43927 109 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 BCAS1O75363 584 aaPredicted RBP12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 FCGR2AP12318 317 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 PRF1P14222 555 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 NID1P14543 1247 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 RYKP34925 604 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 SFTPDP35247 375 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 SLC6A8P48029 635 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 DLX5P56178 289 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 CARD18P57730 90 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 SESN3P58005 492 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 TMEM176BQ3YBM2 270 aaPredicted RBP12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 HBMQ6B0K9 141 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 CGB2Q6NT52 195 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 GDF7Q7Z4P5 450 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 ZNF295-AS1Q8N0V1 137 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 ZNF563Q8TA94 476 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 CNOT9Q92600 299 aaKnown RBP12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 OSTF1Q92882 214 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 TMEM19Q96HH6 336 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 TRIM8Q9BZR9 551 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 PIGMQ9H3S5 423 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 A4GALTQ9NPC4 353 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 TIGARQ9NQ88 270 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 SERINC1Q9NRX5 453 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 ACER3Q9NUN7 267 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 ZNF232Q9UNY5 417 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 CORO2BQ9UQ03 480 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 ABCA12Q86UK0 2595 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 ANKHD1Q8IWZ3 2542 aaKnown RBP12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 EEF1E1-BLOC1S5C9J1V9 151 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 ANGPT2O15123 496 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 EEF1E1O43324 174 aaKnown RBP12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 TNFSF13O75888 250 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 AQP8O94778 261 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 SYNGR4O95473 234 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 NUDT7P0C024 238 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 GPX2P18283 190 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 SSTR2P30874 369 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 UQCRC1P31930 480 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 APOBEC1P41238 236 aaKnown RBP12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 PLAURQ03405 335 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 MERTKQ12866 999 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 ZSWIM7Q19AV6 140 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 RUNDC3AQ59EK9 446 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 MRPL2Q5T653 305 aaKnown RBP12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 PRAMEF8Q5VWM4 474 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 PRAMEF7Q5VXH5 474 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 GTF2IRD2BQ6EKJ0 949 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 PPP4R4Q6NUP7 873 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 C3orf33Q6P1S2 294 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 DLEU7Q6UYE1 221 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 PLEKHM3Q6ZWE6 761 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 GTF2IRD2Q86UP8 949 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 DPP10Q8N608 796 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 CNEP1R1Q8N9A8 125 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 ATP6V1C2Q8NEY4 427 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 OR52P1PQ8NH57 321 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 STARD4Q96DR4 205 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 C14orf79Q96F83 325 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 BCL2L10Q9HD36 194 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 DNAJB12Q9NXW2 375 aaKnown RBP12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 KLHL14Q9P2G3 628 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 KCNN3Q9UGI6 736 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 PRDM4Q9UKN5 801 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 APCP25054 2843 aa12.39□□□□□ -0.43
HERPUD1-218ENST00000569569 A8MXE2 369 aa12.38□□□□□ -0.43
HERPUD1-218ENST00000569569 C5orf58C9J3I9 102 aa12.38□□□□□ -0.43
HERPUD1-218ENST00000569569 MSTNO14793 375 aa12.38□□□□□ -0.43
HERPUD1-218ENST00000569569 THBS1P07996 1170 aa12.38□□□□□ -0.43
HERPUD1-218ENST00000569569 SHC1P29353 583 aa12.38□□□□□ -0.43
HERPUD1-218ENST00000569569 KIR2DL2P43627 348 aaPredicted RBP12.38□□□□□ -0.43
HERPUD1-218ENST00000569569 IDH2P48735 452 aaKnown RBP12.38□□□□□ -0.43
HERPUD1-218ENST00000569569 SF3A3Q12874 501 aaKnown RBP eCLIP12.38□□□□□ -0.431e-8■■□□□ 12.2
HERPUD1-218ENST00000569569 LARS2Q15031 903 aaKnown RBP12.38□□□□□ -0.43
HERPUD1-218ENST00000569569 LIN52Q52LA3 116 aa12.38□□□□□ -0.43
HERPUD1-218ENST00000569569 RPS26P11Q5JNZ5 115 aaPredicted RBP12.38□□□□□ -0.43
HERPUD1-218ENST00000569569 GCNT6Q5T4J0 391 aa12.38□□□□□ -0.43
HERPUD1-218ENST00000569569 GRINAQ7Z429 371 aa12.38□□□□□ -0.43
HERPUD1-218ENST00000569569 LUZP2Q86TE4 346 aa12.38□□□□□ -0.43
HERPUD1-218ENST00000569569 VRK2Q86Y07 508 aa12.38□□□□□ -0.43
HERPUD1-218ENST00000569569 KIF18BQ86Y91 864 aa12.38□□□□□ -0.43
HERPUD1-218ENST00000569569 ZNF440Q8IYI8 595 aa12.38□□□□□ -0.43
HERPUD1-218ENST00000569569 BBS10Q8TAM1 723 aa12.38□□□□□ -0.43
HERPUD1-218ENST00000569569 MAL2Q969L2 176 aa12.38□□□□□ -0.43
HERPUD1-218ENST00000569569 CPNE4Q96A23 557 aaPredicted RBP12.38□□□□□ -0.43
HERPUD1-218ENST00000569569 ZNF317Q96PQ6 595 aaPredicted RBP12.38□□□□□ -0.43
HERPUD1-218ENST00000569569 ARMC7Q9H6L4 198 aa12.38□□□□□ -0.43
HERPUD1-218ENST00000569569 CACYBPQ9HB71 228 aaKnown RBP12.38□□□□□ -0.43
HERPUD1-218ENST00000569569 GLRX2Q9NS18 164 aa12.38□□□□□ -0.43
HERPUD1-218ENST00000569569 PACSIN3Q9UKS6 424 aa12.38□□□□□ -0.43
HERPUD1-218ENST00000569569 IFT52Q9Y366 437 aa12.38□□□□□ -0.43
HERPUD1-218ENST00000569569 CDHR4A6H8M9 788 aa12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 CFAP73A6NFT4 308 aa12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 FAAHO00519 579 aa12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 ADAM11O75078 769 aa12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 PGM3O95394 542 aa12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 PABPC4LP0CB38 370 aaKnown RBP12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 ARAFP10398 606 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms